RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 ARFGAP2Q8N6H7 521 aa2.38□□□□□ -2.03
XRN1-210ENST00000472697 ALLCQ8N6M5 410 aa2.38□□□□□ -2.03
XRN1-210ENST00000472697 OR2T12Q8NG77 320 aa2.38□□□□□ -2.03
XRN1-210ENST00000472697 MAGEC3Q8TD91 643 aa2.38□□□□□ -2.03
XRN1-210ENST00000472697 LIPHQ8WWY8 451 aa2.38□□□□□ -2.03
XRN1-210ENST00000472697 RLN3Q8WXF3 142 aa2.38□□□□□ -2.03
XRN1-210ENST00000472697 PIK3R3Q92569 461 aa2.38□□□□□ -2.03
XRN1-210ENST00000472697 ZNF274Q96GC6 653 aaPredicted RBP2.38□□□□□ -2.03
XRN1-210ENST00000472697 KRT12Q99456 494 aa2.38□□□□□ -2.03
XRN1-210ENST00000472697 TMEM121Q9BTD3 319 aa2.38□□□□□ -2.03
XRN1-210ENST00000472697 BBS2Q9BXC9 721 aa2.38□□□□□ -2.03
XRN1-210ENST00000472697 FTHL17Q9BXU8 183 aa2.38□□□□□ -2.03
XRN1-210ENST00000472697 SPRTNQ9H040 489 aaPredicted RBP2.38□□□□□ -2.03
XRN1-210ENST00000472697 TRPV6Q9H1D0 765 aa2.38□□□□□ -2.03
XRN1-210ENST00000472697 RNF121Q9H920 327 aa2.38□□□□□ -2.03
XRN1-210ENST00000472697 GPN2Q9H9Y4 310 aaPredicted RBP2.38□□□□□ -2.03
XRN1-210ENST00000472697 PLAC1Q9HBJ0 212 aa2.38□□□□□ -2.03
XRN1-210ENST00000472697 PLEK2Q9NYT0 353 aa2.38□□□□□ -2.03
XRN1-210ENST00000472697 FLRT3Q9NZU0 649 aa2.38□□□□□ -2.03
XRN1-210ENST00000472697 SATB2Q9UPW6 733 aa2.38□□□□□ -2.03
XRN1-210ENST00000472697 CHTOPQ9Y3Y2 248 aaKnown RBP2.38□□□□□ -2.03
XRN1-210ENST00000472697 TMEM191CA6NGB0 347 aa2.37□□□□□ -2.03
XRN1-210ENST00000472697 SERINC4A6NH21 518 aa2.37□□□□□ -2.03
XRN1-210ENST00000472697 TMEM150CB9EJG8 249 aa2.37□□□□□ -2.03
XRN1-210ENST00000472697 WWP2O00308 870 aa2.37□□□□□ -2.03
XRN1-210ENST00000472697 SIGLEC5O15389 551 aa2.37□□□□□ -2.03
XRN1-210ENST00000472697 ZNHIT1O43257 154 aa2.37□□□□□ -2.03
XRN1-210ENST00000472697 ZSCAN12O43309 604 aa2.37□□□□□ -2.03
XRN1-210ENST00000472697 SH3BGRLO75368 114 aa2.37□□□□□ -2.03
XRN1-210ENST00000472697 OAS1P00973 400 aaKnown RBP2.37□□□□□ -2.03
XRN1-210ENST00000472697 GCP02774 474 aa2.37□□□□□ -2.03
XRN1-210ENST00000472697 TMEM191BP0C7N4 346 aa2.37□□□□□ -2.03
XRN1-210ENST00000472697 NAGAP17050 411 aa2.37□□□□□ -2.03
XRN1-210ENST00000472697 CYP3A5P20815 502 aa2.37□□□□□ -2.03
XRN1-210ENST00000472697 PROZP22891 400 aa2.37□□□□□ -2.03
XRN1-210ENST00000472697 ACADSBP45954 432 aa2.37□□□□□ -2.03
XRN1-210ENST00000472697 SLC6A8P48029 635 aa2.37□□□□□ -2.03
XRN1-210ENST00000472697 CLCN4P51793 760 aa2.37□□□□□ -2.03
XRN1-210ENST00000472697 PDX1P52945 283 aa2.37□□□□□ -2.03
XRN1-210ENST00000472697 SUCLG1P53597 346 aaKnown RBP2.37□□□□□ -2.03
XRN1-210ENST00000472697 ATP1B3P54709 279 aa2.37□□□□□ -2.03
XRN1-210ENST00000472697 LIM2P55344 173 aa2.37□□□□□ -2.03
XRN1-210ENST00000472697 CLDN17P56750 224 aa2.37□□□□□ -2.03
XRN1-210ENST00000472697 RPP38P78345 283 aaKnown RBP2.37□□□□□ -2.03
XRN1-210ENST00000472697 GK3PQ14409 553 aa2.37□□□□□ -2.03
XRN1-210ENST00000472697 ARHGAP19Q14CB8 494 aa2.37□□□□□ -2.03
XRN1-210ENST00000472697 PCK2Q16822 640 aa2.37□□□□□ -2.03
XRN1-210ENST00000472697 TMEM44Q2T9K0 475 aa2.37□□□□□ -2.03
XRN1-210ENST00000472697 LSM12Q3MHD2 195 aaKnown RBP2.37□□□□□ -2.03
XRN1-210ENST00000472697 LRIT3Q3SXY7 679 aa2.37□□□□□ -2.03
XRN1-210ENST00000472697 FSCBQ5H9T9 825 aa2.37□□□□□ -2.03
XRN1-210ENST00000472697 HECTD2Q5U5R9 776 aa2.37□□□□□ -2.03
XRN1-210ENST00000472697 FCRLBQ6BAA4 426 aa2.37□□□□□ -2.03
XRN1-210ENST00000472697 RTL6Q6ICC9 239 aa2.37□□□□□ -2.03
XRN1-210ENST00000472697 GLCCI1Q86VQ1 547 aa2.37□□□□□ -2.03
XRN1-210ENST00000472697 PARGQ86W56 976 aa2.37□□□□□ -2.03
XRN1-210ENST00000472697 HPS6Q86YV9 775 aa2.37□□□□□ -2.03
XRN1-210ENST00000472697 TCEANCQ8N8B7 351 aa2.37□□□□□ -2.03
XRN1-210ENST00000472697 SLC44A5Q8NCS7 719 aa2.37□□□□□ -2.03
XRN1-210ENST00000472697 BBOF1Q8ND07 529 aa2.37□□□□□ -2.03
XRN1-210ENST00000472697 NFAM1Q8NET5 270 aaPredicted RBP2.37□□□□□ -2.03
XRN1-210ENST00000472697 OR5L2Q8NGL0 311 aa2.37□□□□□ -2.03
XRN1-210ENST00000472697 WFIKKN2Q8TEU8 576 aa2.37□□□□□ -2.03
XRN1-210ENST00000472697 CACNG8Q8WXS5 425 aa2.37□□□□□ -2.03
XRN1-210ENST00000472697 MRPL24Q96A35 216 aaKnown RBP2.37□□□□□ -2.03
XRN1-210ENST00000472697 SLC41A3Q96GZ6 507 aa2.37□□□□□ -2.03
XRN1-210ENST00000472697 ACCSQ96QU6 501 aa2.37□□□□□ -2.03
XRN1-210ENST00000472697 MAP3K3Q99759 626 aa2.37□□□□□ -2.03
XRN1-210ENST00000472697 SSX3Q99909 188 aa2.37□□□□□ -2.03
XRN1-210ENST00000472697 OVOL2Q9BRP0 275 aa2.37□□□□□ -2.03
XRN1-210ENST00000472697 CRNKL1Q9BZJ0 848 aaKnown RBP2.37□□□□□ -2.03
XRN1-210ENST00000472697 RHBGQ9H310 441 aa2.37□□□□□ -2.03
XRN1-210ENST00000472697 EHD1Q9H4M9 534 aa2.37□□□□□ -2.03
XRN1-210ENST00000472697 GEMIN7Q9H840 131 aaKnown RBP2.37□□□□□ -2.03
XRN1-210ENST00000472697 VCPKMTQ9H867 229 aa2.37□□□□□ -2.03
XRN1-210ENST00000472697 FN3KRPQ9HA64 309 aa2.37□□□□□ -2.03
XRN1-210ENST00000472697 POLE4Q9NR33 117 aa2.37□□□□□ -2.03
XRN1-210ENST00000472697 DBF4Q9UBU7 674 aaPredicted RBP2.37□□□□□ -2.03
XRN1-210ENST00000472697 SLC7A8Q9UHI5 535 aa2.37□□□□□ -2.03
XRN1-210ENST00000472697 SLC6A5Q9Y345 797 aa2.37□□□□□ -2.03
XRN1-210ENST00000472697 CAB39Q9Y376 341 aaPredicted RBP2.37□□□□□ -2.03
XRN1-210ENST00000472697 RHBDD3Q9Y3P4 386 aa2.37□□□□□ -2.03
XRN1-210ENST00000472697 ANKRD26Q9UPS8 1709 aa2.37□□□□□ -2.03
XRN1-210ENST00000472697 PAPPA2Q9BXP8 1791 aa2.37□□□□□ -2.03
XRN1-210ENST00000472697 RTL1A6NKG5 1358 aa2.37□□□□□ -2.03
XRN1-210ENST00000472697 FAM74A7A6NL05 159 aa2.37□□□□□ -2.03
XRN1-210ENST00000472697 SIVA1O15304 175 aa2.37□□□□□ -2.03
XRN1-210ENST00000472697 P2RX6O15547 441 aa2.37□□□□□ -2.03
XRN1-210ENST00000472697 TIMM8AO60220 97 aaPredicted RBP2.37□□□□□ -2.03
XRN1-210ENST00000472697 KRT8P05787 483 aa2.37□□□□□ -2.03
XRN1-210ENST00000472697 CT62P0C5K7 136 aa2.37□□□□□ -2.03
XRN1-210ENST00000472697 CSF2RAP15509 400 aa2.37□□□□□ -2.03
XRN1-210ENST00000472697 XRCC1P18887 633 aaPredicted RBP2.37□□□□□ -2.03
XRN1-210ENST00000472697 NCF2P19878 526 aaPredicted RBP2.37□□□□□ -2.03
XRN1-210ENST00000472697 GPD1P21695 349 aa2.37□□□□□ -2.03
XRN1-210ENST00000472697 C21orf33P30042 268 aaPredicted RBP2.37□□□□□ -2.03
XRN1-210ENST00000472697 PCYT1AP49585 367 aa2.37□□□□□ -2.03
XRN1-210ENST00000472697 ACADVLP49748 655 aa2.37□□□□□ -2.03
XRN1-210ENST00000472697 SLC3A1Q07837 685 aa2.37□□□□□ -2.03
XRN1-210ENST00000472697 SIGLEC14Q08ET2 396 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms