RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 USF3Q68DE3 2245 aa8.47□□□□□ -1.05
VCL-204ENST00000472585 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.47□□□□□ -1.05
VCL-204ENST00000472585 A0A0A6YYD5 115 aa8.46□□□□□ -1.06
VCL-204ENST00000472585 C17orf51A8MQB3 221 aa8.46□□□□□ -1.06
VCL-204ENST00000472585 CTIFO43310 598 aaKnown RBP8.46□□□□□ -1.06
VCL-204ENST00000472585 RCBTB2O95199 551 aa8.46□□□□□ -1.06
VCL-204ENST00000472585 SNX4O95219 450 aa8.46□□□□□ -1.06
VCL-204ENST00000472585 TGM6O95932 706 aa8.46□□□□□ -1.06
VCL-204ENST00000472585 GBAP04062 536 aa8.46□□□□□ -1.06
VCL-204ENST00000472585 PCNAP12004 261 aa8.46□□□□□ -1.06
VCL-204ENST00000472585 COX7A2P14406 83 aa8.46□□□□□ -1.06
VCL-204ENST00000472585 CPN1P15169 458 aa8.46□□□□□ -1.06
VCL-204ENST00000472585 SSR2P43308 183 aa8.46□□□□□ -1.06
VCL-204ENST00000472585 DIO3P55073 304 aa8.46□□□□□ -1.06
VCL-204ENST00000472585 PLIN5Q00G26 463 aa8.46□□□□□ -1.06
VCL-204ENST00000472585 TGM3Q08188 693 aa8.46□□□□□ -1.06
VCL-204ENST00000472585 MGAT2Q10469 447 aa8.46□□□□□ -1.06
VCL-204ENST00000472585 FUT7Q11130 342 aa8.46□□□□□ -1.06
VCL-204ENST00000472585 RCAN2Q14206 197 aa8.46□□□□□ -1.06
VCL-204ENST00000472585 RPS6KA2Q15349 733 aa8.46□□□□□ -1.06
VCL-204ENST00000472585 PPP1R7Q15435 360 aa8.46□□□□□ -1.06
VCL-204ENST00000472585 CHRFAM7AQ494W8 412 aa8.46□□□□□ -1.06
VCL-204ENST00000472585 CDKL4Q5MAI5 379 aa8.46□□□□□ -1.06
VCL-204ENST00000472585 C10orf62Q5T681 223 aaPredicted RBP8.46□□□□□ -1.06
VCL-204ENST00000472585 FAM219BQ5XKK7 198 aa8.46□□□□□ -1.06
VCL-204ENST00000472585 ZNF474Q6S9Z5 364 aaPredicted RBP8.46□□□□□ -1.06
VCL-204ENST00000472585 VASH1Q7L8A9 365 aaPredicted RBP8.46□□□□□ -1.06
VCL-204ENST00000472585 SLC29A4Q7RTT9 530 aa8.46□□□□□ -1.06
VCL-204ENST00000472585 DND1Q8IYX4 353 aaKnown RBP8.46□□□□□ -1.06
VCL-204ENST00000472585 GCNT2Q8N0V5 402 aa8.46□□□□□ -1.06
VCL-204ENST00000472585 ZCCHC7Q8N3Z6 543 aaKnown RBP8.46□□□□□ -1.06
VCL-204ENST00000472585 MEIOBQ8N635 442 aa8.46□□□□□ -1.06
VCL-204ENST00000472585 PDPRQ8NCN5 879 aa8.46□□□□□ -1.06
VCL-204ENST00000472585 FBXO36Q8NEA4 188 aa8.46□□□□□ -1.06
VCL-204ENST00000472585 SRFBP1Q8NEF9 429 aaKnown RBP8.46□□□□□ -1.06
VCL-204ENST00000472585 GABPB2Q8TAK5 448 aaPredicted RBP8.46□□□□□ -1.06
VCL-204ENST00000472585 IGFBPL1Q8WX77 278 aa8.46□□□□□ -1.06
VCL-204ENST00000472585 HGDQ93099 445 aa8.46□□□□□ -1.06
VCL-204ENST00000472585 TP53INP1Q96A56 240 aa8.46□□□□□ -1.06
VCL-204ENST00000472585 PIK3IP1Q96FE7 263 aa8.46□□□□□ -1.06
VCL-204ENST00000472585 TMEM41AQ96HV5 264 aa8.46□□□□□ -1.06
VCL-204ENST00000472585 UBXN10Q96LJ8 280 aa8.46□□□□□ -1.06
VCL-204ENST00000472585 UCN2Q96RP3 112 aa8.46□□□□□ -1.06
VCL-204ENST00000472585 OSBPL9Q96SU4 736 aa8.46□□□□□ -1.06
VCL-204ENST00000472585 KRT12Q99456 494 aa8.46□□□□□ -1.06
VCL-204ENST00000472585 MTERF1Q99551 399 aaKnown RBP8.46□□□□□ -1.06
VCL-204ENST00000472585 NXF5Q9H1B4 397 aaKnown RBP8.46□□□□□ -1.06
VCL-204ENST00000472585 RHOJQ9H4E5 214 aa8.46□□□□□ -1.06
VCL-204ENST00000472585 GALNT9Q9HCQ5 603 aa8.46□□□□□ -1.06
VCL-204ENST00000472585 YAE1D1Q9NRH1 226 aa8.46□□□□□ -1.06
VCL-204ENST00000472585 CLCF1Q9UBD9 225 aa8.46□□□□□ -1.06
VCL-204ENST00000472585 ASIC3Q9UHC3 531 aa8.46□□□□□ -1.06
VCL-204ENST00000472585 PPP2R2CQ9Y2T4 447 aa8.46□□□□□ -1.06
VCL-204ENST00000472585 JRKLQ9Y4A0 524 aa8.46□□□□□ -1.06
VCL-204ENST00000472585 TESMINQ9Y4I5 508 aa8.46□□□□□ -1.06
VCL-204ENST00000472585 LRRC14BA6NHZ5 514 aa8.45□□□□□ -1.06
VCL-204ENST00000472585 OR6C76A6NM76 312 aa8.45□□□□□ -1.06
VCL-204ENST00000472585 PGRMC1O00264 195 aaKnown RBP8.45□□□□□ -1.06
VCL-204ENST00000472585 TP53I11O14683 189 aa8.45□□□□□ -1.06
VCL-204ENST00000472585 WIPF1O43516 503 aa8.45□□□□□ -1.06
VCL-204ENST00000472585 TLX2O43763 284 aaPredicted RBP8.45□□□□□ -1.06
VCL-204ENST00000472585 ICOSLGO75144 302 aa8.45□□□□□ -1.06
VCL-204ENST00000472585 AIFM1O95831 613 aa8.45□□□□□ -1.06
VCL-204ENST00000472585 SLC35E2BP0CK96 405 aa8.45□□□□□ -1.06
VCL-204ENST00000472585 SLC35E2P0CK97 266 aa8.45□□□□□ -1.06
VCL-204ENST00000472585 ABCD3P28288 659 aa8.45□□□□□ -1.06
VCL-204ENST00000472585 CCKARP32238 428 aa8.45□□□□□ -1.06
VCL-204ENST00000472585 HPDP32754 393 aaPredicted RBP8.45□□□□□ -1.06
VCL-204ENST00000472585 GALNSP34059 522 aa8.45□□□□□ -1.06
VCL-204ENST00000472585 NEK2P51955 445 aa8.45□□□□□ -1.06
VCL-204ENST00000472585 GFRA1P56159 465 aa8.45□□□□□ -1.06
VCL-204ENST00000472585 CLDN15P56746 228 aa8.45□□□□□ -1.06
VCL-204ENST00000472585 RPS13P62277 151 aaKnown RBP8.45□□□□□ -1.06
VCL-204ENST00000472585 SRYQ05066 204 aa8.45□□□□□ -1.06
VCL-204ENST00000472585 BIKQ13323 160 aa8.45□□□□□ -1.06
VCL-204ENST00000472585 TNK1Q13470 666 aa8.45□□□□□ -1.06
VCL-204ENST00000472585 LAPTM5Q13571 262 aa8.45□□□□□ -1.06
VCL-204ENST00000472585 DDX39BQ13838 428 aaKnown RBP8.45□□□□□ -1.06
VCL-204ENST00000472585 HIST2H2ACQ16777 129 aaPredicted RBP8.45□□□□□ -1.06
VCL-204ENST00000472585 TBCELQ5QJ74 424 aa8.45□□□□□ -1.06
VCL-204ENST00000472585 HIST2H2AA3Q6FI13 130 aa8.45□□□□□ -1.06
VCL-204ENST00000472585 MED27Q6P2C8 311 aa8.45□□□□□ -1.06
VCL-204ENST00000472585 PLEKHM3Q6ZWE6 761 aa8.45□□□□□ -1.06
VCL-204ENST00000472585 ISCA2Q86U28 154 aa8.45□□□□□ -1.06
VCL-204ENST00000472585 TRIM42Q8IWZ5 723 aa8.45□□□□□ -1.06
VCL-204ENST00000472585 TAGAPQ8N103 731 aa8.45□□□□□ -1.06
VCL-204ENST00000472585 PDIK1LQ8N165 341 aa8.45□□□□□ -1.06
VCL-204ENST00000472585 TCAIMQ8N3R3 496 aa8.45□□□□□ -1.06
VCL-204ENST00000472585 RDH11Q8TC12 318 aa8.45□□□□□ -1.06
VCL-204ENST00000472585 TMEM171Q8WVE6 324 aa8.45□□□□□ -1.06
VCL-204ENST00000472585 RGMAQ96B86 450 aa8.45□□□□□ -1.06
VCL-204ENST00000472585 STARD4Q96DR4 205 aa8.45□□□□□ -1.06
VCL-204ENST00000472585 CMTM7Q96FZ5 175 aa8.45□□□□□ -1.06
VCL-204ENST00000472585 SFXN3Q9BWM7 321 aa8.45□□□□□ -1.06
VCL-204ENST00000472585 AMBRA1Q9C0C7 1298 aa8.45□□□□□ -1.06
VCL-204ENST00000472585 CXorf56Q9H5V9 222 aa8.45□□□□□ -1.06
VCL-204ENST00000472585 DDX31Q9H8H2 851 aaKnown RBP8.45□□□□□ -1.06
VCL-204ENST00000472585 POPDC3Q9HBV1 291 aa8.45□□□□□ -1.06
VCL-204ENST00000472585 SERHLQ9NQF3 203 aa8.45□□□□□ -1.06
VCL-204ENST00000472585 KLHL28Q9NXS3 571 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms