RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 PINLYPA6NC86 204 aa2.98□□□□□ -1.93
CD46-213ENST00000471987 AP3B1O00203 1094 aa2.98□□□□□ -1.93
CD46-213ENST00000471987 STX6O43752 255 aa2.98□□□□□ -1.93
CD46-213ENST00000471987 KIAA0513O60268 411 aa2.98□□□□□ -1.93
CD46-213ENST00000471987 NMT2O60551 498 aa2.98□□□□□ -1.93
CD46-213ENST00000471987 DUSP14O95147 198 aaKnown RBP2.98□□□□□ -1.93
CD46-213ENST00000471987 GJB5O95377 273 aa2.98□□□□□ -1.93
CD46-213ENST00000471987 FGFR1OPO95684 399 aaKnown RBP2.98□□□□□ -1.93
CD46-213ENST00000471987 OPN1MWP04001 364 aa2.98□□□□□ -1.93
CD46-213ENST00000471987 SNRPCP09234 159 aaKnown RBP2.98□□□□□ -1.93
CD46-213ENST00000471987 FAM58BPP0C7Q3 252 aa2.98□□□□□ -1.93
CD46-213ENST00000471987 OPN1MW2P0DN77 364 aa2.98□□□□□ -1.93
CD46-213ENST00000471987 OPN1MW3P0DN78 364 aa2.98□□□□□ -1.93
CD46-213ENST00000471987 NR2C1P13056 603 aa2.98□□□□□ -1.93
CD46-213ENST00000471987 PBLDP30039 288 aaPredicted RBP2.98□□□□□ -1.93
CD46-213ENST00000471987 EPS15P42566 896 aa2.98□□□□□ -1.93
CD46-213ENST00000471987 NPY4RP50391 375 aa2.98□□□□□ -1.93
CD46-213ENST00000471987 P2RY4P51582 365 aa2.98□□□□□ -1.93
CD46-213ENST00000471987 POLR2FP61218 127 aaKnown RBP2.98□□□□□ -1.93
CD46-213ENST00000471987 FOLH1Q04609 750 aa2.98□□□□□ -1.93
CD46-213ENST00000471987 LCP2Q13094 533 aa2.98□□□□□ -1.93
CD46-213ENST00000471987 INAQ16352 499 aa2.98□□□□□ -1.93
CD46-213ENST00000471987 TWISTNBQ3B726 338 aaPredicted RBP2.98□□□□□ -1.93
CD46-213ENST00000471987 PAN3Q58A45 887 aaKnown RBP2.98□□□□□ -1.93
CD46-213ENST00000471987 RPUSD3Q6P087 351 aaKnown RBP2.98□□□□□ -1.93
CD46-213ENST00000471987 ZCCHC12Q6PEW1 402 aa2.98□□□□□ -1.93
CD46-213ENST00000471987 CCDC91Q7Z6B0 441 aa2.98□□□□□ -1.93
CD46-213ENST00000471987 CCDC65Q8IXS2 484 aa2.98□□□□□ -1.93
CD46-213ENST00000471987 ENTHD1Q8IYW4 607 aa2.98□□□□□ -1.93
CD46-213ENST00000471987 IPMKQ8NFU5 416 aa2.98□□□□□ -1.93
CD46-213ENST00000471987 RNF138Q8WVD3 245 aa2.98□□□□□ -1.93
CD46-213ENST00000471987 SLCO4A1Q96BD0 722 aa2.98□□□□□ -1.93
CD46-213ENST00000471987 ELSPBP1Q96BH3 223 aa2.98□□□□□ -1.93
CD46-213ENST00000471987 LRRC45Q96CN5 670 aa2.98□□□□□ -1.93
CD46-213ENST00000471987 SGF29Q96ES7 293 aa2.98□□□□□ -1.93
CD46-213ENST00000471987 NRBF2Q96F24 287 aa2.98□□□□□ -1.93
CD46-213ENST00000471987 BSCL2Q96G97 398 aaPredicted RBP2.98□□□□□ -1.93
CD46-213ENST00000471987 VSIG2Q96IQ7 327 aa2.98□□□□□ -1.93
CD46-213ENST00000471987 VPS39Q96JC1 886 aa2.98□□□□□ -1.93
CD46-213ENST00000471987 CCDC43Q96MW1 224 aaKnown RBP2.98□□□□□ -1.93
CD46-213ENST00000471987 RAB40CQ96S21 281 aa2.98□□□□□ -1.93
CD46-213ENST00000471987 ATG101Q9BSB4 218 aa2.98□□□□□ -1.93
CD46-213ENST00000471987 HES7Q9BYE0 225 aa2.98□□□□□ -1.93
CD46-213ENST00000471987 WWP1Q9H0M0 922 aa2.98□□□□□ -1.93
CD46-213ENST00000471987 CLSTN2Q9H4D0 955 aa2.98□□□□□ -1.93
CD46-213ENST00000471987 MINDY3Q9H8M7 445 aa2.98□□□□□ -1.93
CD46-213ENST00000471987 IL1RL2Q9HB29 575 aa2.98□□□□□ -1.93
CD46-213ENST00000471987 TIGARQ9NQ88 270 aa2.98□□□□□ -1.93
CD46-213ENST00000471987 GPR173Q9NS66 373 aa2.98□□□□□ -1.93
CD46-213ENST00000471987 KLHL21Q9UJP4 597 aa2.98□□□□□ -1.93
CD46-213ENST00000471987 ZFP37Q9Y6Q3 630 aaPredicted RBP2.98□□□□□ -1.93
CD46-213ENST00000471987 SPAG9O60271 1321 aaKnown RBP2.97□□□□□ -1.93
CD46-213ENST00000471987 RAD50Q92878 1312 aa2.97□□□□□ -1.93
CD46-213ENST00000471987 IGKV6-21A0A0C4DH24 114 aa2.97□□□□□ -1.93
CD46-213ENST00000471987 UBXN8O00124 270 aa2.97□□□□□ -1.93
CD46-213ENST00000471987 KINO60870 393 aaKnown RBP2.97□□□□□ -1.93
CD46-213ENST00000471987 IGLV1-47P01700 117 aa2.97□□□□□ -1.93
CD46-213ENST00000471987 MMP10P09238 476 aa2.97□□□□□ -1.93
CD46-213ENST00000471987 SLC35E2P0CK97 266 aa2.97□□□□□ -1.93
CD46-213ENST00000471987 TOP1P11387 765 aaKnown RBP2.97□□□□□ -1.93
CD46-213ENST00000471987 SCG2P13521 617 aa2.97□□□□□ -1.93
CD46-213ENST00000471987 CPN1P15169 458 aa2.97□□□□□ -1.93
CD46-213ENST00000471987 ZNF24P17028 368 aa2.97□□□□□ -1.93
CD46-213ENST00000471987 S100A5P33763 92 aa2.97□□□□□ -1.93
CD46-213ENST00000471987 CCR4P51679 360 aa2.97□□□□□ -1.93
CD46-213ENST00000471987 ARHGDIAP52565 204 aa2.97□□□□□ -1.93
CD46-213ENST00000471987 CAPZA1P52907 286 aa2.97□□□□□ -1.93
CD46-213ENST00000471987 KLHL30Q0D2K2 578 aa2.97□□□□□ -1.93
CD46-213ENST00000471987 CEP55Q53EZ4 464 aa2.97□□□□□ -1.93
CD46-213ENST00000471987 BOLA3Q53S33 107 aa2.97□□□□□ -1.93
CD46-213ENST00000471987 CCDC183Q5T5S1 534 aa2.97□□□□□ -1.93
CD46-213ENST00000471987 CAPN13Q6MZZ7 669 aaPredicted RBP2.97□□□□□ -1.93
CD46-213ENST00000471987 LPCAT2Q7L5N7 544 aa2.97□□□□□ -1.93
CD46-213ENST00000471987 NUP93Q8N1F7 819 aa2.97□□□□□ -1.93
CD46-213ENST00000471987 RNF175Q8N4F7 328 aa2.97□□□□□ -1.93
CD46-213ENST00000471987 LINC00469Q8N7U9 141 aa2.97□□□□□ -1.93
CD46-213ENST00000471987 DENND6BQ8NEG7 585 aa2.97□□□□□ -1.93
CD46-213ENST00000471987 GOT1L1Q8NHS2 421 aaPredicted RBP2.97□□□□□ -1.93
CD46-213ENST00000471987 ACMSDQ8TDX5 336 aa2.97□□□□□ -1.93
CD46-213ENST00000471987 CKAP2Q8WWK9 683 aa2.97□□□□□ -1.93
CD46-213ENST00000471987 MRPL24Q96A35 216 aaKnown RBP2.97□□□□□ -1.93
CD46-213ENST00000471987 EPSTI1Q96J88 318 aa2.97□□□□□ -1.93
CD46-213ENST00000471987 COG3Q96JB2 828 aa2.97□□□□□ -1.93
CD46-213ENST00000471987 IMMP1LQ96LU5 166 aa2.97□□□□□ -1.93
CD46-213ENST00000471987 C16orf45Q96MC5 204 aaPredicted RBP2.97□□□□□ -1.93
CD46-213ENST00000471987 C17orf62Q9BQA9 187 aa2.97□□□□□ -1.93
CD46-213ENST00000471987 EDEM3Q9BZQ6 932 aa2.97□□□□□ -1.93
CD46-213ENST00000471987 STMN4Q9H169 189 aaPredicted RBP2.97□□□□□ -1.93
CD46-213ENST00000471987 VCPKMTQ9H867 229 aa2.97□□□□□ -1.93
CD46-213ENST00000471987 ISG20L2Q9H9L3 353 aaKnown RBP2.97□□□□□ -1.93
CD46-213ENST00000471987 KCNMB3Q9NPA1 279 aa2.97□□□□□ -1.93
CD46-213ENST00000471987 KLRF1Q9NZS2 232 aa2.97□□□□□ -1.93
CD46-213ENST00000471987 SEC14L4Q9UDX3 406 aa2.97□□□□□ -1.93
CD46-213ENST00000471987 MOSPD1Q9UJG1 213 aa2.97□□□□□ -1.93
CD46-213ENST00000471987 ARPC4-TTLL3A0A0A6YYG9 625 aa2.96□□□□□ -1.94
CD46-213ENST00000471987 ZNF254O75437 659 aa2.96□□□□□ -1.94
CD46-213ENST00000471987 SLITRK3O94933 977 aa2.96□□□□□ -1.94
CD46-213ENST00000471987 S100A6P06703 90 aa2.96□□□□□ -1.94
CD46-213ENST00000471987 GAP43P17677 238 aa2.96□□□□□ -1.94
CD46-213ENST00000471987 ARF4P18085 180 aaPredicted RBP2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms