RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 APMAPQ9HDC9 416 aa6.6□□□□□ -1.35
BRCA1-210ENST00000471181 C2orf42Q9NWW7 574 aa6.6□□□□□ -1.35
BRCA1-210ENST00000471181 FBXL12Q9NXK8 326 aa6.6□□□□□ -1.35
BRCA1-210ENST00000471181 SIDT1Q9NXL6 827 aaKnown RBP6.6□□□□□ -1.35
BRCA1-210ENST00000471181 TMEM9Q9P0T7 183 aa6.6□□□□□ -1.35
BRCA1-210ENST00000471181 KLHL21Q9UJP4 597 aa6.6□□□□□ -1.35
BRCA1-210ENST00000471181 ASTN1O14525 1302 aa6.6□□□□□ -1.35
BRCA1-210ENST00000471181 MON2Q7Z3U7 1717 aa6.59□□□□□ -1.35
BRCA1-210ENST00000471181 A0A1W2PPW3 197 aa6.59□□□□□ -1.35
BRCA1-210ENST00000471181 A0A1W2PS29 197 aa6.59□□□□□ -1.35
BRCA1-210ENST00000471181 A6NL46 340 aa6.59□□□□□ -1.35
BRCA1-210ENST00000471181 A8MVM7 634 aa6.59□□□□□ -1.35
BRCA1-210ENST00000471181 OR7A17O14581 309 aa6.59□□□□□ -1.35
BRCA1-210ENST00000471181 VEGFDO43915 354 aa6.59□□□□□ -1.35
BRCA1-210ENST00000471181 RAD1O60671 282 aa6.59□□□□□ -1.35
BRCA1-210ENST00000471181 PNPP00491 289 aa6.59□□□□□ -1.35
BRCA1-210ENST00000471181 ITGB2P05107 769 aa6.59□□□□□ -1.35
BRCA1-210ENST00000471181 OR12D1P0DN82 309 aa6.59□□□□□ -1.35
BRCA1-210ENST00000471181 ACRP10323 421 aa6.59□□□□□ -1.35
BRCA1-210ENST00000471181 ATP1B2P14415 290 aaPredicted RBP6.59□□□□□ -1.35
BRCA1-210ENST00000471181 ANXA7P20073 488 aaKnown RBP6.59□□□□□ -1.35
BRCA1-210ENST00000471181 RAB28P51157 221 aa6.59□□□□□ -1.35
BRCA1-210ENST00000471181 CLCNKBP51801 687 aa6.59□□□□□ -1.35
BRCA1-210ENST00000471181 PPP4CP60510 307 aa6.59□□□□□ -1.35
BRCA1-210ENST00000471181 MEF2AQ02078 507 aaPredicted RBP6.59□□□□□ -1.35
BRCA1-210ENST00000471181 DGKZQ13574 1117 aa6.59□□□□□ -1.35
BRCA1-210ENST00000471181 PEA15Q15121 130 aa6.59□□□□□ -1.35
BRCA1-210ENST00000471181 DEFB115Q30KQ5 88 aa6.59□□□□□ -1.35
BRCA1-210ENST00000471181 FAM26DQ5JW98 314 aa6.59□□□□□ -1.35
BRCA1-210ENST00000471181 ANKRD22Q5VYY1 191 aa6.59□□□□□ -1.35
BRCA1-210ENST00000471181 PAPD4Q6PIY7 484 aaKnown RBP6.59□□□□□ -1.35
BRCA1-210ENST00000471181 HS3ST5Q8IZT8 346 aa6.59□□□□□ -1.35
BRCA1-210ENST00000471181 PAPD5Q8NDF8 572 aaKnown RBP6.59□□□□□ -1.35
BRCA1-210ENST00000471181 BPIFCQ8NFQ6 507 aa6.59□□□□□ -1.35
BRCA1-210ENST00000471181 OR4Q3Q8NH05 313 aa6.59□□□□□ -1.35
BRCA1-210ENST00000471181 SNAPC3Q92966 411 aa6.59□□□□□ -1.35
BRCA1-210ENST00000471181 DDIT4LQ96D03 193 aa6.59□□□□□ -1.35
BRCA1-210ENST00000471181 ECHDC3Q96DC8 303 aa6.59□□□□□ -1.35
BRCA1-210ENST00000471181 HHIPL1Q96JK4 782 aa6.59□□□□□ -1.35
BRCA1-210ENST00000471181 FAM84AQ96KN4 292 aa6.59□□□□□ -1.35
BRCA1-210ENST00000471181 CASD1Q96PB1 797 aa6.59□□□□□ -1.35
BRCA1-210ENST00000471181 NELL2Q99435 816 aa6.59□□□□□ -1.35
BRCA1-210ENST00000471181 CNN2Q99439 309 aaKnown RBP6.59□□□□□ -1.35
BRCA1-210ENST00000471181 OCSTAMPQ9BR26 566 aa6.59□□□□□ -1.35
BRCA1-210ENST00000471181 GATA5Q9BWX5 397 aaPredicted RBP6.59□□□□□ -1.35
BRCA1-210ENST00000471181 OSBPL7Q9BZF2 842 aa6.59□□□□□ -1.35
BRCA1-210ENST00000471181 NMNAT2Q9BZQ4 307 aa6.59□□□□□ -1.35
BRCA1-210ENST00000471181 CD320Q9NPF0 282 aa6.59□□□□□ -1.35
BRCA1-210ENST00000471181 PLEKHJ1Q9NW61 149 aa6.59□□□□□ -1.35
BRCA1-210ENST00000471181 TAS2R9Q9NYW1 312 aa6.59□□□□□ -1.35
BRCA1-210ENST00000471181 CRB1P82279 1406 aa6.59□□□□□ -1.35
BRCA1-210ENST00000471181 A2ML1A8K2U0 1454 aa6.59□□□□□ -1.35
BRCA1-210ENST00000471181 SHPRHQ149N8 1683 aa6.59□□□□□ -1.35
BRCA1-210ENST00000471181 LOC102724200A0A096LPH7 203 aaPredicted RBP6.59□□□□□ -1.35
BRCA1-210ENST00000471181 SERTM2A0A1B0GWG4 89 aa6.59□□□□□ -1.35
BRCA1-210ENST00000471181 MEIS3P1A6NDR6 274 aa6.59□□□□□ -1.35
BRCA1-210ENST00000471181 ANKRD30BLA7E2S9 258 aa6.59□□□□□ -1.35
BRCA1-210ENST00000471181 MANBAO00462 879 aa6.59□□□□□ -1.35
BRCA1-210ENST00000471181 SOX30O94993 753 aa6.59□□□□□ -1.35
BRCA1-210ENST00000471181 LCATP04180 440 aa6.59□□□□□ -1.35
BRCA1-210ENST00000471181 C8AP07357 584 aa6.59□□□□□ -1.35
BRCA1-210ENST00000471181 CTRB1P17538 263 aa6.59□□□□□ -1.35
BRCA1-210ENST00000471181 PTGER4P35408 488 aa6.59□□□□□ -1.35
BRCA1-210ENST00000471181 TAS2R30P59541 319 aa6.59□□□□□ -1.35
BRCA1-210ENST00000471181 UFM1P61960 85 aa6.59□□□□□ -1.35
BRCA1-210ENST00000471181 IL10RBQ08334 325 aa6.59□□□□□ -1.35
BRCA1-210ENST00000471181 HNF4GQ14541 408 aa6.59□□□□□ -1.35
BRCA1-210ENST00000471181 PCGF3Q3KNV8 242 aa6.59□□□□□ -1.35
BRCA1-210ENST00000471181 CTRB2Q6GPI1 263 aa6.59□□□□□ -1.35
BRCA1-210ENST00000471181 LEG1Q6P5S2 330 aa6.59□□□□□ -1.35
BRCA1-210ENST00000471181 IL34Q6ZMJ4 242 aa6.59□□□□□ -1.35
BRCA1-210ENST00000471181 ZNF836Q6ZNA1 936 aa6.59□□□□□ -1.35
BRCA1-210ENST00000471181 RNF111Q6ZNA4 994 aa6.59□□□□□ -1.35
BRCA1-210ENST00000471181 GOLGA7Q7Z5G4 137 aa6.59□□□□□ -1.35
BRCA1-210ENST00000471181 TECPR1Q7Z6L1 1165 aa6.59□□□□□ -1.35
BRCA1-210ENST00000471181 TMEM173Q86WV6 379 aaPredicted RBP6.59□□□□□ -1.35
BRCA1-210ENST00000471181 SH3RF2Q8TEC5 729 aa6.59□□□□□ -1.35
BRCA1-210ENST00000471181 OR1E3Q8WZA6 343 aa6.59□□□□□ -1.35
BRCA1-210ENST00000471181 NR4A3Q92570 626 aa6.59□□□□□ -1.35
BRCA1-210ENST00000471181 ELF4Q99607 663 aaPredicted RBP6.59□□□□□ -1.35
BRCA1-210ENST00000471181 SLC6A17Q9H1V8 727 aa6.59□□□□□ -1.35
BRCA1-210ENST00000471181 OPA3Q9H6K4 179 aa6.59□□□□□ -1.35
BRCA1-210ENST00000471181 AKTIPQ9H8T0 292 aa6.59□□□□□ -1.35
BRCA1-210ENST00000471181 LIN7CQ9NUP9 197 aaKnown RBP6.59□□□□□ -1.35
BRCA1-210ENST00000471181 STUB1Q9UNE7 303 aa6.59□□□□□ -1.35
BRCA1-210ENST00000471181 MAGEB4O15481 346 aaPredicted RBP6.59□□□□□ -1.35
BRCA1-210ENST00000471181 SYT7O43581 403 aa6.59□□□□□ -1.35
BRCA1-210ENST00000471181 OR2T1O43869 369 aa6.59□□□□□ -1.35
BRCA1-210ENST00000471181 SEC14L2O76054 403 aa6.59□□□□□ -1.35
BRCA1-210ENST00000471181 PNMTP11086 282 aa6.59□□□□□ -1.35
BRCA1-210ENST00000471181 HLA-DOBP13765 273 aa6.59□□□□□ -1.35
BRCA1-210ENST00000471181 G0S2P27469 103 aa6.59□□□□□ -1.35
BRCA1-210ENST00000471181 PBX3P40426 434 aa6.59□□□□□ -1.35
BRCA1-210ENST00000471181 GSK3AP49840 483 aa6.59□□□□□ -1.35
BRCA1-210ENST00000471181 BIDP55957 195 aa6.59□□□□□ -1.35
BRCA1-210ENST00000471181 SEC61A1P61619 476 aaKnown RBP6.59□□□□□ -1.35
BRCA1-210ENST00000471181 PIGFQ07326 219 aa6.59□□□□□ -1.35
BRCA1-210ENST00000471181 PCBP1Q15365 356 aaKnown RBP eCLIP6.59□□□□□ -1.35
BRCA1-210ENST00000471181 ZNF181Q2M3W8 571 aa6.59□□□□□ -1.35
BRCA1-210ENST00000471181 TIGD5Q53EQ6 642 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms