RNA–Protein interactions for RNA: ENST00000470268.1

SF3B1-208, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 2,003 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-208ENST00000470268 PIM1P11309 404 aaPredicted RBP4.44□□□□□ -1.7
SF3B1-208ENST00000470268 CDK4P11802 303 aa4.44□□□□□ -1.7
SF3B1-208ENST00000470268 RORAP35398 523 aa4.44□□□□□ -1.7
SF3B1-208ENST00000470268 TSFMP43897 325 aaKnown RBP4.44□□□□□ -1.7
SF3B1-208ENST00000470268 ARFIP1P53367 373 aa4.44□□□□□ -1.7
SF3B1-208ENST00000470268 MAPK12P53778 367 aa4.44□□□□□ -1.7
SF3B1-208ENST00000470268 MAPK10P53779 464 aa4.44□□□□□ -1.7
SF3B1-208ENST00000470268 MTTPP55157 894 aa4.44□□□□□ -1.7
SF3B1-208ENST00000470268 TAS2R50P59544 299 aa4.44□□□□□ -1.7
SF3B1-208ENST00000470268 SLC25A3Q00325 362 aa4.44□□□□□ -1.7
SF3B1-208ENST00000470268 ZNF763Q0D2J5 394 aa4.44□□□□□ -1.7
SF3B1-208ENST00000470268 KLF10Q13118 480 aa4.44□□□□□ -1.7
SF3B1-208ENST00000470268 ERV3-1Q14264 604 aa4.44□□□□□ -1.7
SF3B1-208ENST00000470268 HERC3Q15034 1050 aa4.44□□□□□ -1.7
SF3B1-208ENST00000470268 UGT8Q16880 541 aa4.44□□□□□ -1.7
SF3B1-208ENST00000470268 MPEG1Q2M385 716 aa4.44□□□□□ -1.7
SF3B1-208ENST00000470268 MUM1Q2TAK8 710 aa4.44□□□□□ -1.7
SF3B1-208ENST00000470268 CR1LQ2VPA4 569 aa4.44□□□□□ -1.7
SF3B1-208ENST00000470268 ZNF385BQ569K4 471 aa4.44□□□□□ -1.7
SF3B1-208ENST00000470268 NDUFAF5Q5TEU4 345 aa4.44□□□□□ -1.7
SF3B1-208ENST00000470268 FAM71E1Q6IPT2 247 aa4.44□□□□□ -1.7
SF3B1-208ENST00000470268 ANKRD26P1Q6NSI1 321 aa4.44□□□□□ -1.7
SF3B1-208ENST00000470268 COX15Q7KZN9 410 aa4.44□□□□□ -1.7
SF3B1-208ENST00000470268 TMPRSS12Q86WS5 348 aa4.44□□□□□ -1.7
SF3B1-208ENST00000470268 TMEM126BQ8IUX1 230 aa4.44□□□□□ -1.7
SF3B1-208ENST00000470268 CA13Q8N1Q1 262 aa4.44□□□□□ -1.7
SF3B1-208ENST00000470268 CPSF7Q8N684 471 aaKnown RBP4.44□□□□□ -1.7
SF3B1-208ENST00000470268 TTC29Q8NA56 475 aaPredicted RBP4.44□□□□□ -1.7
SF3B1-208ENST00000470268 RBM15BQ8NDT2 890 aaKnown RBP4.44□□□□□ -1.7
SF3B1-208ENST00000470268 SRFBP1Q8NEF9 429 aaKnown RBP4.44□□□□□ -1.7
SF3B1-208ENST00000470268 OR7A2PQ8NGA2 310 aa4.44□□□□□ -1.7
SF3B1-208ENST00000470268 CDC26Q8NHZ8 85 aa4.44□□□□□ -1.7
SF3B1-208ENST00000470268 WDR60Q8WVS4 1066 aa4.44□□□□□ -1.7
SF3B1-208ENST00000470268 RELTQ969Z4 430 aa4.44□□□□□ -1.7
SF3B1-208ENST00000470268 MMABQ96EY8 250 aaPredicted RBP4.44□□□□□ -1.7
SF3B1-208ENST00000470268 NSL1Q96IY1 281 aa4.44□□□□□ -1.7
SF3B1-208ENST00000470268 GBP5Q96PP8 586 aa4.44□□□□□ -1.7
SF3B1-208ENST00000470268 SERINC2Q96SA4 455 aa4.44□□□□□ -1.7
SF3B1-208ENST00000470268 CENPKQ9BS16 269 aa4.44□□□□□ -1.7
SF3B1-208ENST00000470268 RTKNQ9BST9 563 aa4.44□□□□□ -1.7
SF3B1-208ENST00000470268 KRTAP9-8Q9BYQ0 159 aa4.44□□□□□ -1.7
SF3B1-208ENST00000470268 NLNQ9BYT8 704 aa4.44□□□□□ -1.7
SF3B1-208ENST00000470268 SPRY4Q9C004 299 aa4.44□□□□□ -1.7
SF3B1-208ENST00000470268 STRADBQ9C0K7 418 aa4.44□□□□□ -1.7
SF3B1-208ENST00000470268 DENND2DQ9H6A0 471 aaPredicted RBP4.44□□□□□ -1.7
SF3B1-208ENST00000470268 FANCEQ9HB96 536 aa4.44□□□□□ -1.7
SF3B1-208ENST00000470268 ANKHQ9HCJ1 492 aa4.44□□□□□ -1.7
SF3B1-208ENST00000470268 TXLNGQ9NUQ3 528 aa4.44□□□□□ -1.7
SF3B1-208ENST00000470268 C14orf119Q9NWQ9 140 aa4.44□□□□□ -1.7
SF3B1-208ENST00000470268 NMRK1Q9NWW6 199 aa4.44□□□□□ -1.7
SF3B1-208ENST00000470268 SLC39A1Q9NY26 324 aa4.44□□□□□ -1.7
SF3B1-208ENST00000470268 AHSPQ9NZD4 102 aa4.44□□□□□ -1.7
SF3B1-208ENST00000470268 CCDC167Q9P0B6 97 aa4.44□□□□□ -1.7
SF3B1-208ENST00000470268 FOXJ2Q9P0K8 574 aa4.44□□□□□ -1.7
SF3B1-208ENST00000470268 HCN3Q9P1Z3 774 aa4.44□□□□□ -1.7
SF3B1-208ENST00000470268 PISDQ9UG56 409 aa4.44□□□□□ -1.7
SF3B1-208ENST00000470268 FBXW2Q9UKT8 454 aa4.44□□□□□ -1.7
SF3B1-208ENST00000470268 ERVK-11Q9UQG0 969 aa4.44□□□□□ -1.7
SF3B1-208ENST00000470268 EIF3LQ9Y262 564 aaKnown RBP4.44□□□□□ -1.7
SF3B1-208ENST00000470268 CLDN16Q9Y5I7 305 aa4.44□□□□□ -1.7
SF3B1-208ENST00000470268 MDC1Q14676 2089 aaKnown RBP4.43□□□□□ -1.7
SF3B1-208ENST00000470268 A0A1B0GX78 115 aa4.43□□□□□ -1.7
SF3B1-208ENST00000470268 ASPDHA6ND91 283 aa4.43□□□□□ -1.7
SF3B1-208ENST00000470268 GABRR3A8MPY1 467 aa4.43□□□□□ -1.7
SF3B1-208ENST00000470268 H0Y3Z8 333 aa4.43□□□□□ -1.7
SF3B1-208ENST00000470268 H0YIG0 161 aa4.43□□□□□ -1.7
SF3B1-208ENST00000470268 PSMD12O00232 456 aaPredicted RBP4.43□□□□□ -1.7
SF3B1-208ENST00000470268 ETV2O00321 342 aaPredicted RBP4.43□□□□□ -1.7
SF3B1-208ENST00000470268 DSCR3O14972 297 aa4.43□□□□□ -1.7
SF3B1-208ENST00000470268 CHST10O43529 356 aa4.43□□□□□ -1.7
SF3B1-208ENST00000470268 B3GALT2O43825 422 aa4.43□□□□□ -1.7
SF3B1-208ENST00000470268 SCN2BO60939 215 aa4.43□□□□□ -1.7
SF3B1-208ENST00000470268 CNOT3O75175 753 aaKnown RBP4.43□□□□□ -1.7
SF3B1-208ENST00000470268 CDC123O75794 336 aaPredicted RBP4.43□□□□□ -1.7
SF3B1-208ENST00000470268 AIFM1O95831 613 aa4.43□□□□□ -1.7
SF3B1-208ENST00000470268 PRPS2P11908 318 aa4.43□□□□□ -1.7
SF3B1-208ENST00000470268 IDO1P14902 403 aa4.43□□□□□ -1.7
SF3B1-208ENST00000470268 HOXA5P20719 270 aa4.43□□□□□ -1.7
SF3B1-208ENST00000470268 CAPN3P20807 821 aa4.43□□□□□ -1.7
SF3B1-208ENST00000470268 JAK1P23458 1154 aa4.43□□□□□ -1.7
SF3B1-208ENST00000470268 MRPL19P49406 292 aaKnown RBP4.43□□□□□ -1.7
SF3B1-208ENST00000470268 ATP4BP51164 291 aa4.43□□□□□ -1.7
SF3B1-208ENST00000470268 DGKQP52824 942 aa4.43□□□□□ -1.7
SF3B1-208ENST00000470268 ARSFP54793 590 aa4.43□□□□□ -1.7
SF3B1-208ENST00000470268 CLDN8P56748 225 aa4.43□□□□□ -1.7
SF3B1-208ENST00000470268 SHC2P98077 582 aa4.43□□□□□ -1.7
SF3B1-208ENST00000470268 DUSP2Q05923 314 aa4.43□□□□□ -1.7
SF3B1-208ENST00000470268 KLC1Q07866 573 aa4.43□□□□□ -1.7
SF3B1-208ENST00000470268 MAD2L1Q13257 205 aaPredicted RBP4.43□□□□□ -1.7
SF3B1-208ENST00000470268 EIF3IQ13347 325 aaKnown RBP4.43□□□□□ -1.7
SF3B1-208ENST00000470268 SQLEQ14534 574 aa4.43□□□□□ -1.7
SF3B1-208ENST00000470268 GSTA3Q16772 222 aa4.43□□□□□ -1.7
SF3B1-208ENST00000470268 NDUFA9Q16795 377 aa4.43□□□□□ -1.7
SF3B1-208ENST00000470268 FAM214AQ32MH5 1076 aa4.43□□□□□ -1.7
SF3B1-208ENST00000470268 ZNF750Q32MQ0 723 aa4.43□□□□□ -1.7
SF3B1-208ENST00000470268 PDCD4Q53EL6 469 aaKnown RBP4.43□□□□□ -1.7
SF3B1-208ENST00000470268 VWA2Q5GFL6 755 aa4.43□□□□□ -1.7
SF3B1-208ENST00000470268 SPANXN4Q5MJ08 99 aa4.43□□□□□ -1.7
SF3B1-208ENST00000470268 FAM69BQ5VUD6 431 aa4.43□□□□□ -1.7
SF3B1-208ENST00000470268 CD276Q5ZPR3 534 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms