RNA–Protein interactions for RNA: ENST00000470091.1

LINC00173-201, long intergenic non-protein coding RNA 173, humanhuman

TSL 1 (best) BASIC

Gene LINC00173, Length 435 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-201ENST00000470091 INPP5KQ9BT40 448 aa12.72□□□□□ -0.37
LINC00173-201ENST00000470091 DUSP26Q9BV47 211 aa12.72□□□□□ -0.37
LINC00173-201ENST00000470091 TRIM8Q9BZR9 551 aa12.72□□□□□ -0.37
LINC00173-201ENST00000470091 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.72□□□□□ -0.37
LINC00173-201ENST00000470091 RMND5AQ9H871 391 aa12.72□□□□□ -0.37
LINC00173-201ENST00000470091 ADA2Q9NZK5 511 aa12.72□□□□□ -0.37
LINC00173-201ENST00000470091 SH3BP4Q9P0V3 963 aa12.72□□□□□ -0.37
LINC00173-201ENST00000470091 APCP25054 2843 aa12.72□□□□□ -0.37
LINC00173-201ENST00000470091 TACC2O95359 2948 aa12.72□□□□□ -0.37
LINC00173-201ENST00000470091 CIB2O75838 187 aa12.71□□□□□ -0.37
LINC00173-201ENST00000470091 SCELO95171 688 aa12.71□□□□□ -0.37
LINC00173-201ENST00000470091 KCNH1O95259 989 aa12.71□□□□□ -0.37
LINC00173-201ENST00000470091 SERPINA7P05543 415 aa12.71□□□□□ -0.37
LINC00173-201ENST00000470091 FAM58BPP0C7Q3 252 aa12.71□□□□□ -0.37
LINC00173-201ENST00000470091 RPL3P39023 403 aaKnown RBP12.71□□□□□ -0.37
LINC00173-201ENST00000470091 ALDH9A1P49189 494 aa12.71□□□□□ -0.37
LINC00173-201ENST00000470091 ARFIP1P53367 373 aa12.71□□□□□ -0.37
LINC00173-201ENST00000470091 TRA2BP62995 288 aaKnown RBP12.71□□□□□ -0.37
LINC00173-201ENST00000470091 MAT1AQ00266 395 aaKnown RBP12.71□□□□□ -0.37
LINC00173-201ENST00000470091 SLAMF1Q13291 335 aa12.71□□□□□ -0.37
LINC00173-201ENST00000470091 DSG2Q14126 1118 aa12.71□□□□□ -0.37
LINC00173-201ENST00000470091 GTDC1Q4AE62 458 aa12.71□□□□□ -0.37
LINC00173-201ENST00000470091 MRM1Q6IN84 353 aaKnown RBP12.71□□□□□ -0.37
LINC00173-201ENST00000470091 TMEM214Q6NUQ4 689 aaKnown RBP12.71□□□□□ -0.37
LINC00173-201ENST00000470091 PGM2L1Q6PCE3 622 aa12.71□□□□□ -0.37
LINC00173-201ENST00000470091 DLEU7Q6UYE1 221 aa12.71□□□□□ -0.37
LINC00173-201ENST00000470091 R3HCC1LQ7Z5L2 792 aaKnown RBP12.71□□□□□ -0.37
LINC00173-201ENST00000470091 GPR180Q86V85 440 aa12.71□□□□□ -0.37
LINC00173-201ENST00000470091 TICAM1Q8IUC6 712 aa12.71□□□□□ -0.37
LINC00173-201ENST00000470091 CLECL1Q8IZS7 167 aa12.71□□□□□ -0.37
LINC00173-201ENST00000470091 FBXW8Q8N3Y1 598 aa12.71□□□□□ -0.37
LINC00173-201ENST00000470091 ZCCHC7Q8N3Z6 543 aaKnown RBP12.71□□□□□ -0.37
LINC00173-201ENST00000470091 OR8J2Q8NGG1 315 aa12.71□□□□□ -0.37
LINC00173-201ENST00000470091 ITCHQ96J02 903 aa12.71□□□□□ -0.37
LINC00173-201ENST00000470091 TAAR6Q96RI8 345 aa12.71□□□□□ -0.37
LINC00173-201ENST00000470091 SPAG4Q9NPE6 437 aa12.71□□□□□ -0.37
LINC00173-201ENST00000470091 SERHLQ9NQF3 203 aa12.71□□□□□ -0.37
LINC00173-201ENST00000470091 FAM120CQ9NX05 1096 aaKnown RBP12.71□□□□□ -0.37
LINC00173-201ENST00000470091 GMPR2Q9P2T1 348 aaKnown RBP12.71□□□□□ -0.37
LINC00173-201ENST00000470091 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.71□□□□□ -0.37
LINC00173-201ENST00000470091 SLC7A8Q9UHI5 535 aa12.71□□□□□ -0.37
LINC00173-201ENST00000470091 MKL2Q9ULH7 1088 aa12.71□□□□□ -0.37
LINC00173-201ENST00000470091 CROCCQ5TZA2 2017 aa12.71□□□□□ -0.38
LINC00173-201ENST00000470091 TEP1Q99973 2627 aaKnown RBP12.7□□□□□ -0.38
LINC00173-201ENST00000470091 IGLV3-12A0A075B6K2 115 aa12.7□□□□□ -0.38
LINC00173-201ENST00000470091 A0A096LPI6 279 aa12.7□□□□□ -0.38
LINC00173-201ENST00000470091 URADA6NGE7 173 aa12.7□□□□□ -0.38
LINC00173-201ENST00000470091 ZNF860A6NHJ4 632 aa12.7□□□□□ -0.38
LINC00173-201ENST00000470091 ENO4A6NNW6 628 aa12.7□□□□□ -0.38
LINC00173-201ENST00000470091 NME4O00746 187 aa12.7□□□□□ -0.38
LINC00173-201ENST00000470091 FOXS1O43638 330 aa12.7□□□□□ -0.38
LINC00173-201ENST00000470091 SCN2BO60939 215 aa12.7□□□□□ -0.38
LINC00173-201ENST00000470091 PRKRAO75569 313 aaKnown RBP12.7□□□□□ -0.38
LINC00173-201ENST00000470091 BMP10O95393 424 aa12.7□□□□□ -0.38
LINC00173-201ENST00000470091 SMIM10L1P0DMW3 83 aa12.7□□□□□ -0.38
LINC00173-201ENST00000470091 ITGAMP11215 1152 aa12.7□□□□□ -0.38
LINC00173-201ENST00000470091 ALOX12P18054 663 aa12.7□□□□□ -0.38
LINC00173-201ENST00000470091 IL1RNP18510 177 aa12.7□□□□□ -0.38
LINC00173-201ENST00000470091 DDCP20711 480 aa12.7□□□□□ -0.38
LINC00173-201ENST00000470091 CDKN2CP42773 168 aa12.7□□□□□ -0.38
LINC00173-201ENST00000470091 GSTM5P46439 218 aa12.7□□□□□ -0.38
LINC00173-201ENST00000470091 TNFSF10P50591 281 aa12.7□□□□□ -0.38
LINC00173-201ENST00000470091 MTTPP55157 894 aa12.7□□□□□ -0.38
LINC00173-201ENST00000470091 CEACAM7Q14002 265 aa12.7□□□□□ -0.38
LINC00173-201ENST00000470091 SELPLGQ14242 412 aa12.7□□□□□ -0.38
LINC00173-201ENST00000470091 DEFB134Q4QY38 66 aa12.7□□□□□ -0.38
LINC00173-201ENST00000470091 PIGGQ5H8A4 983 aa12.7□□□□□ -0.38
LINC00173-201ENST00000470091 SP5Q6BEB4 398 aaPredicted RBP12.7□□□□□ -0.38
LINC00173-201ENST00000470091 ABHD13Q7L211 337 aa12.7□□□□□ -0.38
LINC00173-201ENST00000470091 PRSS41Q7RTY9 318 aa12.7□□□□□ -0.38
LINC00173-201ENST00000470091 MSRB3Q8IXL7 192 aa12.7□□□□□ -0.38
LINC00173-201ENST00000470091 RNF148Q8N7C7 305 aa12.7□□□□□ -0.38
LINC00173-201ENST00000470091 TMEM125Q96AQ2 219 aa12.7□□□□□ -0.38
LINC00173-201ENST00000470091 CIDECQ96AQ7 238 aaPredicted RBP12.7□□□□□ -0.38
LINC00173-201ENST00000470091 COQ8BQ96D53 544 aa12.7□□□□□ -0.38
LINC00173-201ENST00000470091 MTERF3Q96E29 417 aa12.7□□□□□ -0.38
LINC00173-201ENST00000470091 SMIM10Q96HG1 83 aa12.7□□□□□ -0.38
LINC00173-201ENST00000470091 PRPF18Q99633 342 aaKnown RBP12.7□□□□□ -0.38
LINC00173-201ENST00000470091 CGREF1Q99674 301 aa12.7□□□□□ -0.38
LINC00173-201ENST00000470091 HOPXQ9BPY8 73 aaPredicted RBP12.7□□□□□ -0.38
LINC00173-201ENST00000470091 MAPKAP1Q9BPZ7 522 aa12.7□□□□□ -0.38
LINC00173-201ENST00000470091 SLX1AQ9BQ83 275 aa12.7□□□□□ -0.38
LINC00173-201ENST00000470091 BHLHE41Q9C0J9 482 aaPredicted RBP12.7□□□□□ -0.38
LINC00173-201ENST00000470091 PAIP1Q9H074 479 aaKnown RBP12.7□□□□□ -0.38
LINC00173-201ENST00000470091 MIEF1Q9NQG6 463 aa12.7□□□□□ -0.38
LINC00173-201ENST00000470091 SLC6A13Q9NSD5 602 aa12.7□□□□□ -0.38
LINC00173-201ENST00000470091 LYARQ9NX58 379 aaKnown RBP12.7□□□□□ -0.38
LINC00173-201ENST00000470091 CMTM6Q9NX76 183 aa12.7□□□□□ -0.38
LINC00173-201ENST00000470091 TMEM181Q9P2C4 612 aa12.7□□□□□ -0.38
LINC00173-201ENST00000470091 FBXW2Q9UKT8 454 aa12.7□□□□□ -0.38
LINC00173-201ENST00000470091 WBP11Q9Y2W2 641 aaKnown RBP12.7□□□□□ -0.38
LINC00173-201ENST00000470091 ASB4Q9Y574 426 aa12.7□□□□□ -0.38
LINC00173-201ENST00000470091 NUP210LQ5VU65 1888 aa12.7□□□□□ -0.38
LINC00173-201ENST00000470091 IGHV1-45A0A0A0MS14 117 aa12.69□□□□□ -0.38
LINC00173-201ENST00000470091 TRAV17A0A0B4J275 112 aa12.69□□□□□ -0.38
LINC00173-201ENST00000470091 IGHV3-20A0A0C4DH32 117 aa12.69□□□□□ -0.38
LINC00173-201ENST00000470091 A0A1W2PR48 441 aa12.69□□□□□ -0.38
LINC00173-201ENST00000470091 OR2W5A6NFC9 320 aa12.69□□□□□ -0.38
LINC00173-201ENST00000470091 RFXANKO14593 260 aa12.69□□□□□ -0.38
LINC00173-201ENST00000470091 CPSF4O95639 269 aaKnown RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms