RNA–Protein interactions for RNA: ENST00000467733.1

SSR3-204, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 873 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-204ENST00000467733 CDC14AQ9UNH5 594 aa3.82□□□□□ -1.8
SSR3-204ENST00000467733 ASF1AQ9Y294 204 aa3.82□□□□□ -1.8
SSR3-204ENST00000467733 KLHL20Q9Y2M5 609 aa3.82□□□□□ -1.8
SSR3-204ENST00000467733 KLF13Q9Y2Y9 288 aaPredicted RBP3.82□□□□□ -1.8
SSR3-204ENST00000467733 FAM215AQ9Y5M1 114 aa3.82□□□□□ -1.8
SSR3-204ENST00000467733 SCINQ9Y6U3 715 aa3.82□□□□□ -1.8
SSR3-204ENST00000467733 NCKAP5O14513 1909 aa3.82□□□□□ -1.8
SSR3-204ENST00000467733 FREM1Q5H8C1 2179 aa3.81□□□□□ -1.8
SSR3-204ENST00000467733 MED12Q93074 2177 aa3.81□□□□□ -1.8
SSR3-204ENST00000467733 IGLV3-16A0A075B6K0 115 aa3.81□□□□□ -1.8
SSR3-204ENST00000467733 LOC285095A0A1B0GVY8 99 aa3.81□□□□□ -1.8
SSR3-204ENST00000467733 FAM90A8PA6NJQ4 464 aa3.81□□□□□ -1.8
SSR3-204ENST00000467733 AGAP14A8MT82 685 aa3.81□□□□□ -1.8
SSR3-204ENST00000467733 SYT5O00445 386 aa3.81□□□□□ -1.8
SSR3-204ENST00000467733 BCKDKO14874 412 aa3.81□□□□□ -1.8
SSR3-204ENST00000467733 LIN7AO14910 233 aaPredicted RBP3.81□□□□□ -1.8
SSR3-204ENST00000467733 PHF1O43189 567 aaPredicted RBP3.81□□□□□ -1.8
SSR3-204ENST00000467733 BUD23O43709 281 aaKnown RBP3.81□□□□□ -1.8
SSR3-204ENST00000467733 HS6ST1O60243 411 aa3.81□□□□□ -1.8
SSR3-204ENST00000467733 SRPX2O60687 465 aaPredicted RBP3.81□□□□□ -1.8
SSR3-204ENST00000467733 SRP72O76094 671 aaKnown RBP3.81□□□□□ -1.8
SSR3-204ENST00000467733 AP2A1O95782 977 aa3.81□□□□□ -1.8
SSR3-204ENST00000467733 CD48P09326 243 aa3.81□□□□□ -1.8
SSR3-204ENST00000467733 FAM90A13PP0C7W8 464 aa3.81□□□□□ -1.8
SSR3-204ENST00000467733 FAM90A24PP0C7X0 464 aa3.81□□□□□ -1.8
SSR3-204ENST00000467733 ERVK-10P10266 1014 aa3.81□□□□□ -1.8
SSR3-204ENST00000467733 ATP1B2P14415 290 aaPredicted RBP3.81□□□□□ -1.8
SSR3-204ENST00000467733 MATN1P21941 496 aa3.81□□□□□ -1.8
SSR3-204ENST00000467733 ACADLP28330 430 aa3.81□□□□□ -1.8
SSR3-204ENST00000467733 TACR3P29371 465 aa3.81□□□□□ -1.8
SSR3-204ENST00000467733 GALNSP34059 522 aa3.81□□□□□ -1.8
SSR3-204ENST00000467733 SLC26A3P40879 764 aa3.81□□□□□ -1.8
SSR3-204ENST00000467733 RFC3P40938 356 aa3.81□□□□□ -1.8
SSR3-204ENST00000467733 THBS3P49746 956 aa3.81□□□□□ -1.8
SSR3-204ENST00000467733 KLK7P49862 253 aa3.81□□□□□ -1.8
SSR3-204ENST00000467733 ASCL1P50553 236 aa3.81□□□□□ -1.8
SSR3-204ENST00000467733 TAS2R50P59544 299 aa3.81□□□□□ -1.8
SSR3-204ENST00000467733 DMTNQ08495 405 aa3.81□□□□□ -1.8
SSR3-204ENST00000467733 CBFBQ13951 182 aa3.81□□□□□ -1.8
SSR3-204ENST00000467733 PRTGQ2VWP7 1150 aa3.81□□□□□ -1.8
SSR3-204ENST00000467733 FBXL19-AS1Q494R0 122 aa3.81□□□□□ -1.8
SSR3-204ENST00000467733 SIRPB2Q5JXA9 342 aa3.81□□□□□ -1.8
SSR3-204ENST00000467733 RIPPLY2Q5TAB7 128 aa3.81□□□□□ -1.8
SSR3-204ENST00000467733 RTL6Q6ICC9 239 aa3.81□□□□□ -1.8
SSR3-204ENST00000467733 FRMPD2BQ6IN97 320 aa3.81□□□□□ -1.8
SSR3-204ENST00000467733 GRHL2Q6ISB3 625 aa3.81□□□□□ -1.8
SSR3-204ENST00000467733 LANCL3Q6ZV70 420 aa3.81□□□□□ -1.8
SSR3-204ENST00000467733 CPEB2Q7Z5Q1 589 aaKnown RBP3.81□□□□□ -1.8
SSR3-204ENST00000467733 NIPA2Q8N8Q9 360 aa3.81□□□□□ -1.8
SSR3-204ENST00000467733 ZFP62Q8NB50 900 aaPredicted RBP3.81□□□□□ -1.8
SSR3-204ENST00000467733 RELL2Q8NC24 303 aaPredicted RBP3.81□□□□□ -1.8
SSR3-204ENST00000467733 CCNYQ8ND76 341 aa3.81□□□□□ -1.8
SSR3-204ENST00000467733 SPATA22Q8NHS9 363 aa3.81□□□□□ -1.8
SSR3-204ENST00000467733 M1APQ8TC57 530 aa3.81□□□□□ -1.8
SSR3-204ENST00000467733 BLOC1S5Q8TDH9 187 aa3.81□□□□□ -1.8
SSR3-204ENST00000467733 CREB3L4Q8TEY5 395 aa3.81□□□□□ -1.8
SSR3-204ENST00000467733 HEXDCQ8WVB3 486 aa3.81□□□□□ -1.8
SSR3-204ENST00000467733 METTL21AQ8WXB1 218 aa3.81□□□□□ -1.8
SSR3-204ENST00000467733 RNASE6Q93091 150 aaKnown RBP3.81□□□□□ -1.8
SSR3-204ENST00000467733 FAF2Q96CS3 445 aa3.81□□□□□ -1.8
SSR3-204ENST00000467733 CABS1Q96KC9 395 aa3.81□□□□□ -1.8
SSR3-204ENST00000467733 LYZL4Q96KX0 146 aa3.81□□□□□ -1.8
SSR3-204ENST00000467733 COPS8Q99627 209 aa3.81□□□□□ -1.8
SSR3-204ENST00000467733 TTYH2Q9BSA4 534 aa3.81□□□□□ -1.8
SSR3-204ENST00000467733 SYT11Q9BT88 431 aa3.81□□□□□ -1.8
SSR3-204ENST00000467733 FICDQ9BVA6 458 aa3.81□□□□□ -1.8
SSR3-204ENST00000467733 VN1R1Q9GZP7 353 aa3.81□□□□□ -1.8
SSR3-204ENST00000467733 ATG10Q9H0Y0 220 aa3.81□□□□□ -1.8
SSR3-204ENST00000467733 ASB8Q9H765 288 aa3.81□□□□□ -1.8
SSR3-204ENST00000467733 TRIM45Q9H8W5 580 aaPredicted RBP3.81□□□□□ -1.8
SSR3-204ENST00000467733 MMP25Q9NPA2 562 aa3.81□□□□□ -1.8
SSR3-204ENST00000467733 PNPLA3Q9NST1 481 aa3.81□□□□□ -1.8
SSR3-204ENST00000467733 ARL8BQ9NVJ2 186 aa3.81□□□□□ -1.8
SSR3-204ENST00000467733 CRLS1Q9UJA2 301 aa3.81□□□□□ -1.8
SSR3-204ENST00000467733 TDRKHQ9Y2W6 561 aaKnown RBP3.81□□□□□ -1.8
SSR3-204ENST00000467733 KLK4Q9Y5K2 254 aa3.81□□□□□ -1.8
SSR3-204ENST00000467733 NBEAL2Q6ZNJ1 2754 aa3.8□□□□□ -1.8
SSR3-204ENST00000467733 PRKDCP78527 4128 aaKnown RBP3.8□□□□□ -1.8
SSR3-204ENST00000467733 TRRAPQ9Y4A5 3859 aa3.8□□□□□ -1.8
SSR3-204ENST00000467733 LOC105369274A0A096LPK9 316 aa3.8□□□□□ -1.8
SSR3-204ENST00000467733 IGHV3-20A0A0C4DH32 117 aa3.8□□□□□ -1.8
SSR3-204ENST00000467733 LOC102723532A0A0G2JNH3 316 aa3.8□□□□□ -1.8
SSR3-204ENST00000467733 A0A1W2PPR1 153 aa3.8□□□□□ -1.8
SSR3-204ENST00000467733 OR2W5A6NFC9 320 aa3.8□□□□□ -1.8
SSR3-204ENST00000467733 TUBAL3A6NHL2 446 aa3.8□□□□□ -1.8
SSR3-204ENST00000467733 TMCO5BA8MYB1 307 aa3.8□□□□□ -1.8
SSR3-204ENST00000467733 NPIPA2E9PIF3 369 aa3.8□□□□□ -1.8
SSR3-204ENST00000467733 NPIPA3F8WFD2 350 aa3.8□□□□□ -1.8
SSR3-204ENST00000467733 KLRC4-KLRK1H3BQV0 150 aa3.8□□□□□ -1.8
SSR3-204ENST00000467733 CLDN4O14493 209 aa3.8□□□□□ -1.8
SSR3-204ENST00000467733 STX7O15400 261 aaKnown RBP3.8□□□□□ -1.8
SSR3-204ENST00000467733 WDR1O75083 606 aa3.8□□□□□ -1.8
SSR3-204ENST00000467733 EPOP01588 193 aa3.8□□□□□ -1.8
SSR3-204ENST00000467733 EIF2S1P05198 315 aaKnown RBP3.8□□□□□ -1.8
SSR3-204ENST00000467733 ANXA5P08758 320 aa3.8□□□□□ -1.8
SSR3-204ENST00000467733 MYBL1P10243 752 aa3.8□□□□□ -1.8
SSR3-204ENST00000467733 PECAM1P16284 738 aaPredicted RBP3.8□□□□□ -1.8
SSR3-204ENST00000467733 FERP16591 822 aa3.8□□□□□ -1.8
SSR3-204ENST00000467733 ATP5F1P24539 256 aaPredicted RBP3.8□□□□□ -1.8
SSR3-204ENST00000467733 DUSP1P28562 367 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms