RNA–Protein interactions for RNA: ENST00000467681.5

SSBP1-206, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 630 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-206ENST00000467681 PRPF18Q99633 342 aaKnown RBP12.6□□□□□ -0.39
SSBP1-206ENST00000467681 MED4Q9NPJ6 270 aa12.6□□□□□ -0.39
SSBP1-206ENST00000467681 ACSS1Q9NUB1 689 aaPredicted RBP12.6□□□□□ -0.39
SSBP1-206ENST00000467681 PRODH2Q9UF12 536 aa12.6□□□□□ -0.39
SSBP1-206ENST00000467681 BCAP29Q9UHQ4 241 aa12.6□□□□□ -0.39
SSBP1-206ENST00000467681 A0A087WV62 115 aa12.59□□□□□ -0.39
SSBP1-206ENST00000467681 SCAMP2O15127 329 aaKnown RBP12.59□□□□□ -0.39
SSBP1-206ENST00000467681 SLITRK5O94991 958 aa12.59□□□□□ -0.39
SSBP1-206ENST00000467681 OR6B1O95007 311 aa12.59□□□□□ -0.39
SSBP1-206ENST00000467681 TGDSO95455 350 aa12.59□□□□□ -0.39
SSBP1-206ENST00000467681 NADKO95544 446 aaPredicted RBP12.59□□□□□ -0.39
SSBP1-206ENST00000467681 IFI6P09912 130 aa12.59□□□□□ -0.39
SSBP1-206ENST00000467681 LAMP1P11279 417 aa12.59□□□□□ -0.39
SSBP1-206ENST00000467681 DRD5P21918 477 aa12.59□□□□□ -0.39
SSBP1-206ENST00000467681 EPHA3P29320 983 aa12.59□□□□□ -0.39
SSBP1-206ENST00000467681 HPCAL1P37235 193 aa12.59□□□□□ -0.39
SSBP1-206ENST00000467681 SOX3P41225 446 aa12.59□□□□□ -0.39
SSBP1-206ENST00000467681 FRKP42685 505 aaPredicted RBP12.59□□□□□ -0.39
SSBP1-206ENST00000467681 EMDP50402 254 aa12.59□□□□□ -0.39
SSBP1-206ENST00000467681 MANFP55145 182 aaKnown RBP12.59□□□□□ -0.39
SSBP1-206ENST00000467681 TLE1Q04724 770 aa12.59□□□□□ -0.39
SSBP1-206ENST00000467681 OPN5Q6U736 354 aa12.59□□□□□ -0.39
SSBP1-206ENST00000467681 EPGNQ6UW88 154 aa12.59□□□□□ -0.39
SSBP1-206ENST00000467681 LYPD8Q6UX82 237 aa12.59□□□□□ -0.39
SSBP1-206ENST00000467681 IL20RBQ6UXL0 311 aa12.59□□□□□ -0.39
SSBP1-206ENST00000467681 ZNF551Q7Z340 670 aaPredicted RBP12.59□□□□□ -0.39
SSBP1-206ENST00000467681 NATD1Q8N6N6 113 aa12.59□□□□□ -0.39
SSBP1-206ENST00000467681 C17orf47Q8NEP4 570 aa12.59□□□□□ -0.39
SSBP1-206ENST00000467681 OR7G2Q8NG99 324 aa12.59□□□□□ -0.39
SSBP1-206ENST00000467681 OR52R1Q8NGF1 315 aa12.59□□□□□ -0.39
SSBP1-206ENST00000467681 CPT1CQ8TCG5 803 aa12.59□□□□□ -0.39
SSBP1-206ENST00000467681 NUDT8Q8WV74 236 aa12.59□□□□□ -0.39
SSBP1-206ENST00000467681 ASB15Q8WXK1 588 aa12.59□□□□□ -0.39
SSBP1-206ENST00000467681 CIDECQ96AQ7 238 aaPredicted RBP12.59□□□□□ -0.39
SSBP1-206ENST00000467681 SNRNP40Q96DI7 357 aaKnown RBP12.59□□□□□ -0.39
SSBP1-206ENST00000467681 ZBED6CLQ96FA7 236 aaPredicted RBP12.59□□□□□ -0.39
SSBP1-206ENST00000467681 SCMH1Q96GD3 660 aa12.59□□□□□ -0.39
SSBP1-206ENST00000467681 MAELQ96JY0 434 aaKnown RBP12.59□□□□□ -0.39
SSBP1-206ENST00000467681 SGCZQ96LD1 299 aa12.59□□□□□ -0.39
SSBP1-206ENST00000467681 C5orf34Q96MH7 638 aa12.59□□□□□ -0.39
SSBP1-206ENST00000467681 GAL3ST4Q96RP7 486 aa12.59□□□□□ -0.39
SSBP1-206ENST00000467681 BARD1Q99728 777 aaKnown RBP12.59□□□□□ -0.39
SSBP1-206ENST00000467681 C19orf53Q9UNZ5 99 aaPredicted RBP12.59□□□□□ -0.39
SSBP1-206ENST00000467681 MAPRE3Q9UPY8 281 aa12.59□□□□□ -0.39
SSBP1-206ENST00000467681 ERVK-11Q9UQG0 969 aa12.59□□□□□ -0.39
SSBP1-206ENST00000467681 COPG1Q9Y678 874 aaKnown RBP12.59□□□□□ -0.39
SSBP1-206ENST00000467681 USH1CQ9Y6N9 552 aa12.59□□□□□ -0.39
SSBP1-206ENST00000467681 CPAMD8Q8IZJ3 1885 aa12.59□□□□□ -0.39
SSBP1-206ENST00000467681 ZGRF1Q86YA3 2104 aa12.58□□□□□ -0.4
SSBP1-206ENST00000467681 GOLGA8QA0A0J9YX86 632 aa12.58□□□□□ -0.4
SSBP1-206ENST00000467681 GOLGA8OA6NCC3 632 aa12.58□□□□□ -0.4
SSBP1-206ENST00000467681 A8MVJ9 347 aa12.58□□□□□ -0.4
SSBP1-206ENST00000467681 GOLGA8NF8WBI6 632 aa12.58□□□□□ -0.4
SSBP1-206ENST00000467681 ANKRD28O15084 1053 aa12.58□□□□□ -0.4
SSBP1-206ENST00000467681 PDPK1O15530 556 aa12.58□□□□□ -0.4
SSBP1-206ENST00000467681 SLC25A12O75746 678 aa12.58□□□□□ -0.4
SSBP1-206ENST00000467681 PLA2G2AP14555 144 aa12.58□□□□□ -0.4
SSBP1-206ENST00000467681 GPX3P22352 226 aa12.58□□□□□ -0.4
SSBP1-206ENST00000467681 PPICP45877 212 aa12.58□□□□□ -0.4
SSBP1-206ENST00000467681 NR0B1P51843 470 aaKnown RBP12.58□□□□□ -0.4
SSBP1-206ENST00000467681 DCAF7P61962 342 aa12.58□□□□□ -0.4
SSBP1-206ENST00000467681 MAPKAPK3Q16644 382 aa12.58□□□□□ -0.4
SSBP1-206ENST00000467681 ZNF791Q3KP31 576 aaPredicted RBP12.58□□□□□ -0.4
SSBP1-206ENST00000467681 SLC9B1Q4ZJI4 515 aa12.58□□□□□ -0.4
SSBP1-206ENST00000467681 TAGAPQ8N103 731 aa12.58□□□□□ -0.4
SSBP1-206ENST00000467681 CYP4Z2PQ8N1L4 340 aa12.58□□□□□ -0.4
SSBP1-206ENST00000467681 ARFGAP2Q8N6H7 521 aa12.58□□□□□ -0.4
SSBP1-206ENST00000467681 ZFP28Q8NHY6 868 aa12.58□□□□□ -0.4
SSBP1-206ENST00000467681 SLC22A8Q8TCC7 542 aa12.58□□□□□ -0.4
SSBP1-206ENST00000467681 TMEM125Q96AQ2 219 aa12.58□□□□□ -0.4
SSBP1-206ENST00000467681 ANKRA2Q9H9E1 313 aa12.58□□□□□ -0.4
SSBP1-206ENST00000467681 TIMMDC1Q9NPL8 285 aa12.58□□□□□ -0.4
SSBP1-206ENST00000467681 KLHL1Q9NR64 748 aa12.58□□□□□ -0.4
SSBP1-206ENST00000467681 HPF1Q9NWY4 346 aa12.58□□□□□ -0.4
SSBP1-206ENST00000467681 GPR55Q9Y2T6 319 aaPredicted RBP12.58□□□□□ -0.4
SSBP1-206ENST00000467681 NINQ8N4C6 2090 aa12.58□□□□□ -0.4
SSBP1-206ENST00000467681 SHANK1Q9Y566 2161 aa12.57□□□□□ -0.4
SSBP1-206ENST00000467681 UPK1AO00322 258 aa12.57□□□□□ -0.4
SSBP1-206ENST00000467681 NME2P1O60361 137 aa12.57□□□□□ -0.4
SSBP1-206ENST00000467681 FBXO45P0C2W1 286 aa12.57□□□□□ -0.4
SSBP1-206ENST00000467681 NAGAP17050 411 aa12.57□□□□□ -0.4
SSBP1-206ENST00000467681 NME2P22392 152 aa12.57□□□□□ -0.4
SSBP1-206ENST00000467681 MC3RP41968 323 aa12.57□□□□□ -0.4
SSBP1-206ENST00000467681 MLC1Q15049 377 aa12.57□□□□□ -0.4
SSBP1-206ENST00000467681 INAQ16352 499 aa12.57□□□□□ -0.4
SSBP1-206ENST00000467681 PRR30Q53SZ7 412 aaPredicted RBP12.57□□□□□ -0.4
SSBP1-206ENST00000467681 NXNQ6DKJ4 435 aa12.57□□□□□ -0.4
SSBP1-206ENST00000467681 TMEM64Q6YI46 380 aa12.57□□□□□ -0.4
SSBP1-206ENST00000467681 RTL4Q6ZR62 310 aa12.57□□□□□ -0.4
SSBP1-206ENST00000467681 GALNTL5Q7Z4T8 443 aa12.57□□□□□ -0.4
SSBP1-206ENST00000467681 MDGA2Q7Z553 956 aa12.57□□□□□ -0.4
SSBP1-206ENST00000467681 CAMKMTQ7Z624 323 aa12.57□□□□□ -0.4
SSBP1-206ENST00000467681 DND1Q8IYX4 353 aaKnown RBP12.57□□□□□ -0.4
SSBP1-206ENST00000467681 OR2L13Q8N349 312 aa12.57□□□□□ -0.4
SSBP1-206ENST00000467681 TMEM178AQ8NBL3 297 aa12.57□□□□□ -0.4
SSBP1-206ENST00000467681 CEP70Q8NHQ1 597 aa12.57□□□□□ -0.4
SSBP1-206ENST00000467681 DNAJB8Q8NHS0 232 aa12.57□□□□□ -0.4
SSBP1-206ENST00000467681 GRHL3Q8TE85 626 aa12.57□□□□□ -0.4
SSBP1-206ENST00000467681 OR5P2Q8WZ92 322 aa12.57□□□□□ -0.4
SSBP1-206ENST00000467681 MIB2Q96AX9 1013 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms