RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 METTL27Q8N6F8 245 aaPredicted RBP5.03□□□□□ -1.6
PTCD3-207ENST00000467273 AMER3Q8N944 861 aa5.03□□□□□ -1.6
PTCD3-207ENST00000467273 LMNTD1Q8N9Z9 388 aa5.03□□□□□ -1.6
PTCD3-207ENST00000467273 LINC01555Q8NAE3 123 aa5.03□□□□□ -1.6
PTCD3-207ENST00000467273 KCTD6Q8NC69 237 aa5.03□□□□□ -1.6
PTCD3-207ENST00000467273 OR10Q1Q8NGQ4 319 aa5.03□□□□□ -1.6
PTCD3-207ENST00000467273 OR2L8Q8NGY9 312 aa5.03□□□□□ -1.6
PTCD3-207ENST00000467273 SPATA22Q8NHS9 363 aa5.03□□□□□ -1.6
PTCD3-207ENST00000467273 HMGCLL1Q8TB92 370 aa5.03□□□□□ -1.6
PTCD3-207ENST00000467273 BLOC1S5Q8TDH9 187 aa5.03□□□□□ -1.6
PTCD3-207ENST00000467273 SPSB4Q96A44 273 aa5.03□□□□□ -1.6
PTCD3-207ENST00000467273 ZNF764Q96H86 408 aaPredicted RBP5.03□□□□□ -1.6
PTCD3-207ENST00000467273 CABS1Q96KC9 395 aa5.03□□□□□ -1.6
PTCD3-207ENST00000467273 C10orf90Q96M02 699 aa5.03□□□□□ -1.6
PTCD3-207ENST00000467273 C16orf45Q96MC5 204 aaPredicted RBP5.03□□□□□ -1.6
PTCD3-207ENST00000467273 Q96MF0 132 aa5.03□□□□□ -1.6
PTCD3-207ENST00000467273 RBM14Q96PK6 669 aaKnown RBP5.03□□□□□ -1.6
PTCD3-207ENST00000467273 CYTH2Q99418 400 aa5.03□□□□□ -1.6
PTCD3-207ENST00000467273 NPAS2Q99743 824 aa5.03□□□□□ -1.6
PTCD3-207ENST00000467273 NRTNQ99748 197 aa5.03□□□□□ -1.6
PTCD3-207ENST00000467273 DRC3Q9H069 523 aa5.03□□□□□ -1.6
PTCD3-207ENST00000467273 LIN28AQ9H9Z2 209 aaKnown RBP5.03□□□□□ -1.6
PTCD3-207ENST00000467273 ETAA1Q9NY74 926 aa5.03□□□□□ -1.6
PTCD3-207ENST00000467273 PSD3Q9NYI0 1048 aa5.03□□□□□ -1.6
PTCD3-207ENST00000467273 MTRF1LQ9UGC7 380 aaKnown RBP5.03□□□□□ -1.6
PTCD3-207ENST00000467273 LCMT1Q9UIC8 334 aa5.03□□□□□ -1.6
PTCD3-207ENST00000467273 CRLS1Q9UJA2 301 aa5.03□□□□□ -1.6
PTCD3-207ENST00000467273 MID2Q9UJV3 735 aa5.03□□□□□ -1.6
PTCD3-207ENST00000467273 TDRKHQ9Y2W6 561 aaKnown RBP5.03□□□□□ -1.6
PTCD3-207ENST00000467273 TRBV5-4A0A0C4DH59 114 aa5.02□□□□□ -1.61
PTCD3-207ENST00000467273 SLC5A10A0PJK1 596 aa5.02□□□□□ -1.61
PTCD3-207ENST00000467273 OR2A25A4D2G3 310 aa5.02□□□□□ -1.61
PTCD3-207ENST00000467273 TUBAL3A6NHL2 446 aa5.02□□□□□ -1.61
PTCD3-207ENST00000467273 CLCA1A8K7I4 914 aa5.02□□□□□ -1.61
PTCD3-207ENST00000467273 H0YIG0 161 aa5.02□□□□□ -1.61
PTCD3-207ENST00000467273 FCHO1O14526 889 aa5.02□□□□□ -1.61
PTCD3-207ENST00000467273 ZNHIT1O43257 154 aa5.02□□□□□ -1.61
PTCD3-207ENST00000467273 TXNL1O43396 289 aa5.02□□□□□ -1.61
PTCD3-207ENST00000467273 TLX2O43763 284 aaPredicted RBP5.02□□□□□ -1.61
PTCD3-207ENST00000467273 HS6ST1O60243 411 aa5.02□□□□□ -1.61
PTCD3-207ENST00000467273 CDC40O60508 579 aaKnown RBP eCLIP5.02□□□□□ -1.61
PTCD3-207ENST00000467273 TSC22D2O75157 780 aa5.02□□□□□ -1.61
PTCD3-207ENST00000467273 VPS26AO75436 327 aa5.02□□□□□ -1.61
PTCD3-207ENST00000467273 PAHP00439 452 aa5.02□□□□□ -1.61
PTCD3-207ENST00000467273 CD48P09326 243 aa5.02□□□□□ -1.61
PTCD3-207ENST00000467273 PKMP14618 531 aaKnown RBP5.02□□□□□ -1.61
PTCD3-207ENST00000467273 ZFXP17010 805 aaPredicted RBP5.02□□□□□ -1.61
PTCD3-207ENST00000467273 CHRM3P20309 590 aa5.02□□□□□ -1.61
PTCD3-207ENST00000467273 IL10P22301 178 aa5.02□□□□□ -1.61
PTCD3-207ENST00000467273 UQCRC1P31930 480 aa5.02□□□□□ -1.61
PTCD3-207ENST00000467273 GRIA3P42263 894 aa5.02□□□□□ -1.61
PTCD3-207ENST00000467273 HLCSP50747 726 aa5.02□□□□□ -1.61
PTCD3-207ENST00000467273 MPP3Q13368 585 aa5.02□□□□□ -1.61
PTCD3-207ENST00000467273 KIAA0930Q6ICG6 404 aaPredicted RBP5.02□□□□□ -1.61
PTCD3-207ENST00000467273 FRMPD2BQ6IN97 320 aa5.02□□□□□ -1.61
PTCD3-207ENST00000467273 WDR73Q6P4I2 378 aa5.02□□□□□ -1.61
PTCD3-207ENST00000467273 ANGPTL8Q6UXH0 198 aa5.02□□□□□ -1.61
PTCD3-207ENST00000467273 BZW1Q7L1Q6 419 aaKnown RBP5.02□□□□□ -1.61
PTCD3-207ENST00000467273 RPS19BP1Q86WX3 136 aaKnown RBP5.02□□□□□ -1.61
PTCD3-207ENST00000467273 HIPK1Q86Z02 1210 aa5.02□□□□□ -1.61
PTCD3-207ENST00000467273 DCUN1D3Q8IWE4 304 aa5.02□□□□□ -1.61
PTCD3-207ENST00000467273 GSPT2Q8IYD1 628 aaKnown RBP5.02□□□□□ -1.61
PTCD3-207ENST00000467273 RAB42Q8N4Z0 105 aa5.02□□□□□ -1.61
PTCD3-207ENST00000467273 PQLC3Q8N755 202 aa5.02□□□□□ -1.61
PTCD3-207ENST00000467273 SPC24Q8NBT2 197 aa5.02□□□□□ -1.61
PTCD3-207ENST00000467273 MOSPD2Q8NHP6 518 aa5.02□□□□□ -1.61
PTCD3-207ENST00000467273 MUL1Q969V5 352 aa5.02□□□□□ -1.61
PTCD3-207ENST00000467273 MMABQ96EY8 250 aaPredicted RBP5.02□□□□□ -1.61
PTCD3-207ENST00000467273 VPS39Q96JC1 886 aa5.02□□□□□ -1.61
PTCD3-207ENST00000467273 C7orf26Q96N11 449 aa5.02□□□□□ -1.61
PTCD3-207ENST00000467273 OLFM3Q96PB7 478 aa5.02□□□□□ -1.61
PTCD3-207ENST00000467273 RNF157Q96PX1 679 aa5.02□□□□□ -1.61
PTCD3-207ENST00000467273 VAT1Q99536 393 aa5.02□□□□□ -1.61
PTCD3-207ENST00000467273 LPAR4Q99677 370 aa5.02□□□□□ -1.61
PTCD3-207ENST00000467273 SH3GL2Q99962 352 aa5.02□□□□□ -1.61
PTCD3-207ENST00000467273 VN1R1Q9GZP7 353 aa5.02□□□□□ -1.61
PTCD3-207ENST00000467273 ISCUQ9H1K1 167 aa5.02□□□□□ -1.61
PTCD3-207ENST00000467273 OR10A4Q9H209 315 aa5.02□□□□□ -1.61
PTCD3-207ENST00000467273 ZDHHC11Q9H8X9 412 aa5.02□□□□□ -1.61
PTCD3-207ENST00000467273 CCDC177Q9NQR7 707 aaPredicted RBP5.02□□□□□ -1.61
PTCD3-207ENST00000467273 ANKRD10Q9NXR5 420 aa5.02□□□□□ -1.61
PTCD3-207ENST00000467273 ZNF629Q9UEG4 869 aaPredicted RBP5.02□□□□□ -1.61
PTCD3-207ENST00000467273 SLC39A10Q9ULF5 831 aa5.02□□□□□ -1.61
PTCD3-207ENST00000467273 FAM215AQ9Y5M1 114 aa5.02□□□□□ -1.61
PTCD3-207ENST00000467273 ANK2Q01484 3957 aa5.01□□□□□ -1.61
PTCD3-207ENST00000467273 LOC105369274A0A096LPK9 316 aa5.01□□□□□ -1.61
PTCD3-207ENST00000467273 ARPC4-TTLL3A0A0A6YYG9 625 aa5.01□□□□□ -1.61
PTCD3-207ENST00000467273 LOC102723532A0A0G2JNH3 316 aa5.01□□□□□ -1.61
PTCD3-207ENST00000467273 A0A0U1RQJ8 604 aa5.01□□□□□ -1.61
PTCD3-207ENST00000467273 FAM234BA2RU67 622 aa5.01□□□□□ -1.61
PTCD3-207ENST00000467273 KRTAP29-1A8MX34 341 aaPredicted RBP5.01□□□□□ -1.61
PTCD3-207ENST00000467273 TMCO5BA8MYB1 307 aa5.01□□□□□ -1.61
PTCD3-207ENST00000467273 UBXN8O00124 270 aa5.01□□□□□ -1.61
PTCD3-207ENST00000467273 RAB27BO00194 218 aa5.01□□□□□ -1.61
PTCD3-207ENST00000467273 PEX1O43933 1283 aa5.01□□□□□ -1.61
PTCD3-207ENST00000467273 SIX3O95343 332 aaPredicted RBP5.01□□□□□ -1.61
PTCD3-207ENST00000467273 STAMBPO95630 424 aa5.01□□□□□ -1.61
PTCD3-207ENST00000467273 IGHG3P01860 377 aa5.01□□□□□ -1.61
PTCD3-207ENST00000467273 TUBB4AP04350 444 aa5.01□□□□□ -1.61
PTCD3-207ENST00000467273 TNNT1P13805 278 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms