RNA–Protein interactions for RNA: ENST00000465278.2

CACNA1C-223, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 3

Gene CACNA1C, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-223ENST00000465278 TRPV4Q9HBA0 871 aa4.6□□□□□ -1.67
CACNA1C-223ENST00000465278 HHATLQ9HCP6 504 aa4.6□□□□□ -1.67
CACNA1C-223ENST00000465278 TUFT1Q9NNX1 390 aa4.6□□□□□ -1.67
CACNA1C-223ENST00000465278 PXMP2Q9NR77 195 aa4.6□□□□□ -1.67
CACNA1C-223ENST00000465278 RMND1Q9NWS8 449 aa4.6□□□□□ -1.67
CACNA1C-223ENST00000465278 EURLQ9NYK6 297 aa4.6□□□□□ -1.67
CACNA1C-223ENST00000465278 GAGE2DQ9UEU5 116 aa4.6□□□□□ -1.67
CACNA1C-223ENST00000465278 LRWD1Q9UFC0 647 aa4.6□□□□□ -1.67
CACNA1C-223ENST00000465278 HMGXB4Q9UGU5 601 aa4.6□□□□□ -1.67
CACNA1C-223ENST00000465278 ASIC3Q9UHC3 531 aa4.6□□□□□ -1.67
CACNA1C-223ENST00000465278 SLC7A8Q9UHI5 535 aa4.6□□□□□ -1.67
CACNA1C-223ENST00000465278 SH3BGRL2Q9UJC5 107 aa4.6□□□□□ -1.67
CACNA1C-223ENST00000465278 LRP12Q9Y561 859 aa4.6□□□□□ -1.67
CACNA1C-223ENST00000465278 NFASCO94856 1347 aa4.6□□□□□ -1.67
CACNA1C-223ENST00000465278 PRRC2AP48634 2157 aaKnown RBP4.6□□□□□ -1.67
CACNA1C-223ENST00000465278 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.6□□□□□ -1.67
CACNA1C-223ENST00000465278 IGKV6D-21A0A0A0MT36 114 aa4.59□□□□□ -1.67
CACNA1C-223ENST00000465278 A0A0G2JNG1 304 aa4.59□□□□□ -1.67
CACNA1C-223ENST00000465278 C1orf232A0A0U1RR37 186 aa4.59□□□□□ -1.67
CACNA1C-223ENST00000465278 A0A1W2PS18 150 aa4.59□□□□□ -1.67
CACNA1C-223ENST00000465278 C15orf62A8K5M9 175 aa4.59□□□□□ -1.67
CACNA1C-223ENST00000465278 CENPBD1B2RD01 187 aa4.59□□□□□ -1.67
CACNA1C-223ENST00000465278 UBXN8O00124 270 aa4.59□□□□□ -1.67
CACNA1C-223ENST00000465278 SGK1O00141 431 aa4.59□□□□□ -1.67
CACNA1C-223ENST00000465278 ZW10O43264 779 aa4.59□□□□□ -1.67
CACNA1C-223ENST00000465278 GRID2O43424 1007 aa4.59□□□□□ -1.67
CACNA1C-223ENST00000465278 BUD23O43709 281 aaKnown RBP4.59□□□□□ -1.67
CACNA1C-223ENST00000465278 SYNGR3O43761 229 aa4.59□□□□□ -1.67
CACNA1C-223ENST00000465278 GPR137BO60478 399 aa4.59□□□□□ -1.67
CACNA1C-223ENST00000465278 PRAMEF11O60813 436 aa4.59□□□□□ -1.67
CACNA1C-223ENST00000465278 CTSVO60911 334 aa4.59□□□□□ -1.67
CACNA1C-223ENST00000465278 MED24O75448 989 aa4.59□□□□□ -1.67
CACNA1C-223ENST00000465278 CRTAPO75718 401 aaPredicted RBP4.59□□□□□ -1.67
CACNA1C-223ENST00000465278 STBD1O95210 358 aa4.59□□□□□ -1.67
CACNA1C-223ENST00000465278 TGDSO95455 350 aa4.59□□□□□ -1.67
CACNA1C-223ENST00000465278 HLA-DRAP01903 254 aa4.59□□□□□ -1.67
CACNA1C-223ENST00000465278 CRYAAP02489 173 aa4.59□□□□□ -1.67
CACNA1C-223ENST00000465278 SLC4A1P02730 911 aa4.59□□□□□ -1.67
CACNA1C-223ENST00000465278 RPS17P08708 135 aaKnown RBP4.59□□□□□ -1.67
CACNA1C-223ENST00000465278 LINGO3P0C6S8 592 aa4.59□□□□□ -1.67
CACNA1C-223ENST00000465278 SMIM10L2AP0DMW4 78 aa4.59□□□□□ -1.67
CACNA1C-223ENST00000465278 SMIM10L2BP0DMW5 78 aa4.59□□□□□ -1.67
CACNA1C-223ENST00000465278 ACP2P11117 423 aa4.59□□□□□ -1.67
CACNA1C-223ENST00000465278 AMD1P17707 334 aa4.59□□□□□ -1.67
CACNA1C-223ENST00000465278 NR1D1P20393 614 aa4.59□□□□□ -1.67
CACNA1C-223ENST00000465278 ACAT1P24752 427 aaKnown RBP4.59□□□□□ -1.67
CACNA1C-223ENST00000465278 CRABP2P29373 138 aa4.59□□□□□ -1.67
CACNA1C-223ENST00000465278 PBLDP30039 288 aaPredicted RBP4.59□□□□□ -1.67
CACNA1C-223ENST00000465278 EVI2BP34910 448 aa4.59□□□□□ -1.67
CACNA1C-223ENST00000465278 PPP1R2P41236 205 aa4.59□□□□□ -1.67
CACNA1C-223ENST00000465278 MTIF2P46199 727 aaKnown RBP4.59□□□□□ -1.67
CACNA1C-223ENST00000465278 CAPZA2P47755 286 aa4.59□□□□□ -1.67
CACNA1C-223ENST00000465278 ARHGDIBP52566 201 aa4.59□□□□□ -1.67
CACNA1C-223ENST00000465278 AP3M2P53677 418 aa4.59□□□□□ -1.67
CACNA1C-223ENST00000465278 MLLT10P55197 1068 aa4.59□□□□□ -1.67
CACNA1C-223ENST00000465278 ERVPABLB-1P60509 514 aa4.59□□□□□ -1.67
CACNA1C-223ENST00000465278 VBP1P61758 197 aa4.59□□□□□ -1.67
CACNA1C-223ENST00000465278 POLR2GP62487 172 aaKnown RBP eCLIP4.59□□□□□ -1.67
CACNA1C-223ENST00000465278 UBE2IP63279 158 aaKnown RBP4.59□□□□□ -1.67
CACNA1C-223ENST00000465278 NTHL1P78549 312 aa4.59□□□□□ -1.67
CACNA1C-223ENST00000465278 POU3F1Q03052 451 aaPredicted RBP4.59□□□□□ -1.67
CACNA1C-223ENST00000465278 MBTD1Q05BQ5 628 aa4.59□□□□□ -1.67
CACNA1C-223ENST00000465278 ILF3Q12906 894 aaKnown RBP eCLIP4.59□□□□□ -1.67
CACNA1C-223ENST00000465278 KIR2DS5Q14953 304 aa4.59□□□□□ -1.67
CACNA1C-223ENST00000465278 TSC22D1Q15714 1073 aa4.59□□□□□ -1.67
CACNA1C-223ENST00000465278 ZNF672Q499Z4 452 aaPredicted RBP4.59□□□□□ -1.67
CACNA1C-223ENST00000465278 PDLIM3Q53GG5 364 aaPredicted RBP4.59□□□□□ -1.67
CACNA1C-223ENST00000465278 FBXO48Q5FWF7 155 aa4.59□□□□□ -1.67
CACNA1C-223ENST00000465278 HES3Q5TGS1 186 aa4.59□□□□□ -1.67
CACNA1C-223ENST00000465278 WBP2NLQ6ICG8 309 aa4.59□□□□□ -1.67
CACNA1C-223ENST00000465278 CENPPQ6IPU0 288 aa4.59□□□□□ -1.67
CACNA1C-223ENST00000465278 ANO5Q75V66 913 aa4.59□□□□□ -1.67
CACNA1C-223ENST00000465278 PLPPR4Q7Z2D5 763 aa4.59□□□□□ -1.67
CACNA1C-223ENST00000465278 NR2C2APQ86WQ0 139 aa4.59□□□□□ -1.67
CACNA1C-223ENST00000465278 TMEM173Q86WV6 379 aaPredicted RBP4.59□□□□□ -1.67
CACNA1C-223ENST00000465278 FAM9CQ8IZT9 166 aa4.59□□□□□ -1.67
CACNA1C-223ENST00000465278 CRYBG2Q8N1P7 616 aa4.59□□□□□ -1.67
CACNA1C-223ENST00000465278 OR6C4Q8NGE1 309 aa4.59□□□□□ -1.67
CACNA1C-223ENST00000465278 ITFG1Q8TB96 612 aa4.59□□□□□ -1.67
CACNA1C-223ENST00000465278 SLC22A8Q8TCC7 542 aa4.59□□□□□ -1.67
CACNA1C-223ENST00000465278 SLC26A7Q8TE54 656 aa4.59□□□□□ -1.67
CACNA1C-223ENST00000465278 PDCD6IPQ8WUM4 868 aaKnown RBP4.59□□□□□ -1.67
CACNA1C-223ENST00000465278 CIDECQ96AQ7 238 aaPredicted RBP4.59□□□□□ -1.67
CACNA1C-223ENST00000465278 NXNL1Q96CM4 212 aa4.59□□□□□ -1.67
CACNA1C-223ENST00000465278 C7orf34Q96L11 122 aa4.59□□□□□ -1.67
CACNA1C-223ENST00000465278 DGAT2Q96PD7 388 aa4.59□□□□□ -1.67
CACNA1C-223ENST00000465278 NDNQ99608 321 aa4.59□□□□□ -1.67
CACNA1C-223ENST00000465278 LRRC1Q9BTT6 524 aa4.59□□□□□ -1.67
CACNA1C-223ENST00000465278 TXLNGYQ9BZA5 131 aa4.59□□□□□ -1.67
CACNA1C-223ENST00000465278 YIPF3Q9GZM5 350 aa4.59□□□□□ -1.67
CACNA1C-223ENST00000465278 NAT10Q9H0A0 1025 aaKnown RBP4.59□□□□□ -1.67
CACNA1C-223ENST00000465278 LRRC19Q9H756 370 aa4.59□□□□□ -1.67
CACNA1C-223ENST00000465278 VIPAS39Q9H9C1 493 aa4.59□□□□□ -1.67
CACNA1C-223ENST00000465278 FKRPQ9H9S5 495 aa4.59□□□□□ -1.67
CACNA1C-223ENST00000465278 ZNF556Q9HAH1 456 aa4.59□□□□□ -1.67
CACNA1C-223ENST00000465278 FANCEQ9HB96 536 aa4.59□□□□□ -1.67
CACNA1C-223ENST00000465278 CCDC177Q9NQR7 707 aaPredicted RBP4.59□□□□□ -1.67
CACNA1C-223ENST00000465278 FARSBQ9NSD9 589 aaKnown RBP4.59□□□□□ -1.67
CACNA1C-223ENST00000465278 SLC38A7Q9NVC3 462 aa4.59□□□□□ -1.67
CACNA1C-223ENST00000465278 OSER1Q9NX31 292 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms