RNA–Protein interactions for RNA: ENST00000464304.1

HMG20B-208, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-208ENST00000464304 PTPN13Q12923 2485 aa17.36■□□□□ 0.37
HMG20B-208ENST00000464304 COL12A1Q99715 3063 aa17.35■□□□□ 0.37
HMG20B-208ENST00000464304 NINQ8N4C6 2090 aa17.35■□□□□ 0.37
HMG20B-208ENST00000464304 B8ZZF3 427 aa17.35■□□□□ 0.37
HMG20B-208ENST00000464304 POLR3GO15318 223 aaPredicted RBP17.35■□□□□ 0.37
HMG20B-208ENST00000464304 DDX5P17844 614 aaKnown RBP17.35■□□□□ 0.37
HMG20B-208ENST00000464304 CD96P40200 585 aa17.35■□□□□ 0.37
HMG20B-208ENST00000464304 TNFSF10P50591 281 aa17.35■□□□□ 0.37
HMG20B-208ENST00000464304 NME5P56597 212 aa17.35■□□□□ 0.37
HMG20B-208ENST00000464304 PLEKHN1Q494U1 663 aaPredicted RBP17.35■□□□□ 0.37
HMG20B-208ENST00000464304 FHL5Q5TD97 284 aa17.35■□□□□ 0.37
HMG20B-208ENST00000464304 TMEM107Q6UX40 140 aa17.35■□□□□ 0.37
HMG20B-208ENST00000464304 ZFP28Q8NHY6 868 aa17.35■□□□□ 0.37
HMG20B-208ENST00000464304 PNPLA2Q96AD5 504 aa17.35■□□□□ 0.37
HMG20B-208ENST00000464304 COQ8BQ96D53 544 aa17.35■□□□□ 0.37
HMG20B-208ENST00000464304 ZBED6CLQ96FA7 236 aaPredicted RBP17.35■□□□□ 0.37
HMG20B-208ENST00000464304 SIGLEC12Q96PQ1 595 aa17.35■□□□□ 0.37
HMG20B-208ENST00000464304 RASL10BQ96S79 203 aa17.35■□□□□ 0.37
HMG20B-208ENST00000464304 UTP23Q9BRU9 249 aaKnown RBP17.35■□□□□ 0.37
HMG20B-208ENST00000464304 TRIM4Q9C037 500 aa17.35■□□□□ 0.37
HMG20B-208ENST00000464304 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.35■□□□□ 0.37
HMG20B-208ENST00000464304 CCDC134Q9H6E4 229 aa17.35■□□□□ 0.37
HMG20B-208ENST00000464304 TCF7L2Q9NQB0 619 aa17.35■□□□□ 0.37
HMG20B-208ENST00000464304 ACSS1Q9NUB1 689 aaPredicted RBP17.35■□□□□ 0.37
HMG20B-208ENST00000464304 MAPRE3Q9UPY8 281 aa17.35■□□□□ 0.37
HMG20B-208ENST00000464304 B3GNT3Q9Y2A9 372 aa17.35■□□□□ 0.37
HMG20B-208ENST00000464304 YARS2Q9Y2Z4 477 aaKnown RBP17.35■□□□□ 0.37
HMG20B-208ENST00000464304 C2orf92A0A1B0GVN3 265 aa17.34■□□□□ 0.37
HMG20B-208ENST00000464304 PLOD3O60568 738 aa17.34■□□□□ 0.37
HMG20B-208ENST00000464304 PRAMEF2O60811 474 aa17.34■□□□□ 0.37
HMG20B-208ENST00000464304 NME6O75414 186 aaPredicted RBP17.34■□□□□ 0.37
HMG20B-208ENST00000464304 NADKO95544 446 aaPredicted RBP17.34■□□□□ 0.37
HMG20B-208ENST00000464304 SPTA1P02549 2419 aa17.34■□□□□ 0.37
HMG20B-208ENST00000464304 GPX3P22352 226 aa17.34■□□□□ 0.37
HMG20B-208ENST00000464304 GPC1P35052 558 aa17.34■□□□□ 0.37
HMG20B-208ENST00000464304 CDK9P50750 372 aaKnown RBP17.34■□□□□ 0.37
HMG20B-208ENST00000464304 SSR4P51571 173 aa17.34■□□□□ 0.37
HMG20B-208ENST00000464304 MANFP55145 182 aaKnown RBP17.34■□□□□ 0.37
HMG20B-208ENST00000464304 UFM1P61960 85 aa17.34■□□□□ 0.37
HMG20B-208ENST00000464304 OC90Q02509 493 aaPredicted RBP17.34■□□□□ 0.37
HMG20B-208ENST00000464304 TLR1Q15399 786 aa17.34■□□□□ 0.37
HMG20B-208ENST00000464304 CAMKMTQ7Z624 323 aa17.34■□□□□ 0.37
HMG20B-208ENST00000464304 LURAP1LQ8IV03 231 aa17.34■□□□□ 0.37
HMG20B-208ENST00000464304 TMEM156Q8N614 296 aa17.34■□□□□ 0.37
HMG20B-208ENST00000464304 ZNF441Q8N8Z8 693 aa17.34■□□□□ 0.37
HMG20B-208ENST00000464304 Q8NA96 180 aa17.34■□□□□ 0.37
HMG20B-208ENST00000464304 RFWD2Q8NHY2 731 aa17.34■□□□□ 0.37
HMG20B-208ENST00000464304 ADIPOR1Q96A54 375 aa17.34■□□□□ 0.37
HMG20B-208ENST00000464304 ERP27Q96DN0 273 aa17.34■□□□□ 0.37
HMG20B-208ENST00000464304 TEX37Q96LM6 180 aa17.34■□□□□ 0.37
HMG20B-208ENST00000464304 PRPF18Q99633 342 aaKnown RBP17.34■□□□□ 0.37
HMG20B-208ENST00000464304 DUSP26Q9BV47 211 aa17.34■□□□□ 0.37
HMG20B-208ENST00000464304 ITPAQ9BY32 194 aa17.34■□□□□ 0.37
HMG20B-208ENST00000464304 NPHS2Q9NP85 383 aa17.34■□□□□ 0.37
HMG20B-208ENST00000464304 ATAD3AQ9NVI7 634 aa17.34■□□□□ 0.37
HMG20B-208ENST00000464304 FGFR1OP2Q9NVK5 253 aa17.34■□□□□ 0.37
HMG20B-208ENST00000464304 ANAPC2Q9UJX6 822 aa17.34■□□□□ 0.37
HMG20B-208ENST00000464304 SHANK1Q9Y566 2161 aa17.33■□□□□ 0.37
HMG20B-208ENST00000464304 A0A087WV62 115 aa17.33■□□□□ 0.36
HMG20B-208ENST00000464304 C9JVG2 144 aa17.33■□□□□ 0.36
HMG20B-208ENST00000464304 E9PBE3 544 aa17.33■□□□□ 0.36
HMG20B-208ENST00000464304 PLOD2O00469 737 aa17.33■□□□□ 0.36
HMG20B-208ENST00000464304 UBDO15205 165 aa17.33■□□□□ 0.36
HMG20B-208ENST00000464304 SORBS2O94875 1100 aaKnown RBP17.33■□□□□ 0.36
HMG20B-208ENST00000464304 SLITRK5O94991 958 aa17.33■□□□□ 0.36
HMG20B-208ENST00000464304 TRHRP34981 398 aaPredicted RBP17.33■□□□□ 0.36
HMG20B-208ENST00000464304 CASRP41180 1078 aa17.33■□□□□ 0.36
HMG20B-208ENST00000464304 SOX3P41225 446 aa17.33■□□□□ 0.36
HMG20B-208ENST00000464304 CYB561P49447 251 aa17.33■□□□□ 0.36
HMG20B-208ENST00000464304 EMDP50402 254 aa17.33■□□□□ 0.36
HMG20B-208ENST00000464304 HLCSP50747 726 aa17.33■□□□□ 0.36
HMG20B-208ENST00000464304 ZNF169Q14929 603 aaPredicted RBP17.33■□□□□ 0.36
HMG20B-208ENST00000464304 OR1C1Q15619 314 aa17.33■□□□□ 0.36
HMG20B-208ENST00000464304 PGS1Q32NB8 556 aa17.33■□□□□ 0.36
HMG20B-208ENST00000464304 HLA-DQA1Q5Y7H0 255 aa17.33■□□□□ 0.36
HMG20B-208ENST00000464304 OR4F3Q6IEY1 312 aa17.33■□□□□ 0.36
HMG20B-208ENST00000464304 ZNF227Q86WZ6 799 aa17.33■□□□□ 0.36
HMG20B-208ENST00000464304 MDS2Q8NDY4 140 aa17.33■□□□□ 0.36
HMG20B-208ENST00000464304 ASB15Q8WXK1 588 aa17.33■□□□□ 0.36
HMG20B-208ENST00000464304 ELP4Q96EB1 424 aa17.33■□□□□ 0.36
HMG20B-208ENST00000464304 MAGED4Q96JG8 741 aa17.33■□□□□ 0.36
HMG20B-208ENST00000464304 CCDC28BQ9BUN5 200 aa17.33■□□□□ 0.36
HMG20B-208ENST00000464304 BHLHE41Q9C0J9 482 aaPredicted RBP17.33■□□□□ 0.36
HMG20B-208ENST00000464304 LRFN1Q9P244 771 aa17.33■□□□□ 0.36
HMG20B-208ENST00000464304 DCTN4Q9UJW0 460 aa17.33■□□□□ 0.36
HMG20B-208ENST00000464304 CFL2Q9Y281 166 aa17.33■□□□□ 0.36
HMG20B-208ENST00000464304 BSNQ9UPA5 3926 aa17.32■□□□□ 0.36
HMG20B-208ENST00000464304 TRAV17A0A0B4J275 112 aa17.32■□□□□ 0.36
HMG20B-208ENST00000464304 A0A1W2PRB8 838 aa17.32■□□□□ 0.36
HMG20B-208ENST00000464304 UPK1AO00322 258 aa17.32■□□□□ 0.36
HMG20B-208ENST00000464304 SLC28A2O43868 658 aa17.32■□□□□ 0.36
HMG20B-208ENST00000464304 BCAS2O75934 225 aaPredicted RBP17.32■□□□□ 0.36
HMG20B-208ENST00000464304 NEURL1O76050 574 aa17.32■□□□□ 0.36
HMG20B-208ENST00000464304 OR6B1O95007 311 aa17.32■□□□□ 0.36
HMG20B-208ENST00000464304 C6orf47O95873 294 aa17.32■□□□□ 0.36
HMG20B-208ENST00000464304 VIMP08670 466 aaKnown RBP17.32■□□□□ 0.36
HMG20B-208ENST00000464304 IDO1P14902 403 aa17.32■□□□□ 0.36
HMG20B-208ENST00000464304 IL12AP29459 219 aa17.32■□□□□ 0.36
HMG20B-208ENST00000464304 NR0B1P51843 470 aaKnown RBP17.32■□□□□ 0.36
HMG20B-208ENST00000464304 CLNS1AP54105 237 aaKnown RBP17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms