RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 HEPACAMQ14CZ8 416 aa11.94□□□□□ -0.5
XRN1-203ENST00000463916 NTRK2Q16620 822 aa11.94□□□□□ -0.5
XRN1-203ENST00000463916 ZNF628Q5EBL2 1059 aa11.94□□□□□ -0.5
XRN1-203ENST00000463916 PRAMEF20Q5VT98 475 aa11.94□□□□□ -0.5
XRN1-203ENST00000463916 KANK2Q63ZY3 851 aa11.94□□□□□ -0.5
XRN1-203ENST00000463916 DESI1Q6ICB0 168 aa11.94□□□□□ -0.5
XRN1-203ENST00000463916 FAM71E1Q6IPT2 247 aa11.94□□□□□ -0.5
XRN1-203ENST00000463916 C3P1Q6ZMU1 363 aa11.94□□□□□ -0.5
XRN1-203ENST00000463916 NCCRP1Q6ZVX7 275 aaPredicted RBP11.94□□□□□ -0.5
XRN1-203ENST00000463916 EXOC3L1Q86VI1 746 aa11.94□□□□□ -0.5
XRN1-203ENST00000463916 PRR22Q8IZ63 422 aa11.94□□□□□ -0.5
XRN1-203ENST00000463916 OR52R1Q8NGF1 315 aa11.94□□□□□ -0.5
XRN1-203ENST00000463916 OR9A2Q8NGT5 310 aa11.94□□□□□ -0.5
XRN1-203ENST00000463916 OR6Y1Q8NGX8 325 aa11.94□□□□□ -0.5
XRN1-203ENST00000463916 KAT2AQ92830 837 aa11.94□□□□□ -0.5
XRN1-203ENST00000463916 TP53INP1Q96A56 240 aa11.94□□□□□ -0.5
XRN1-203ENST00000463916 MAGED4Q96JG8 741 aa11.94□□□□□ -0.5
XRN1-203ENST00000463916 ZIM3Q96PE6 472 aa11.94□□□□□ -0.5
XRN1-203ENST00000463916 FAM173AQ9BQD7 235 aa11.94□□□□□ -0.5
XRN1-203ENST00000463916 RRAGDQ9NQL2 400 aaPredicted RBP11.94□□□□□ -0.5
XRN1-203ENST00000463916 SLC35C2Q9NQQ7 365 aa11.94□□□□□ -0.5
XRN1-203ENST00000463916 PLSCR2Q9NRY7 297 aa11.94□□□□□ -0.5
XRN1-203ENST00000463916 BCAP29Q9UHQ4 241 aa11.94□□□□□ -0.5
XRN1-203ENST00000463916 PCNX1Q96RV3 2341 aa11.94□□□□□ -0.5
XRN1-203ENST00000463916 NPHS1O60500 1241 aa11.93□□□□□ -0.5
XRN1-203ENST00000463916 SEC22BO75396 215 aa11.93□□□□□ -0.5
XRN1-203ENST00000463916 FGF4P08620 206 aa11.93□□□□□ -0.5
XRN1-203ENST00000463916 CELA3AP09093 270 aa11.93□□□□□ -0.5
XRN1-203ENST00000463916 DDCP20711 480 aa11.93□□□□□ -0.5
XRN1-203ENST00000463916 EMDP50402 254 aa11.93□□□□□ -0.5
XRN1-203ENST00000463916 PLGLB1Q02325 96 aa11.93□□□□□ -0.5
XRN1-203ENST00000463916 CEBPEQ15744 281 aa11.93□□□□□ -0.5
XRN1-203ENST00000463916 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.93□□□□□ -0.5
XRN1-203ENST00000463916 BICRALQ6AI39 1079 aa11.93□□□□□ -0.5
XRN1-203ENST00000463916 MAMDC2Q7Z304 686 aaPredicted RBP11.93□□□□□ -0.5
XRN1-203ENST00000463916 DOLPP1Q86YN1 238 aa11.93□□□□□ -0.5
XRN1-203ENST00000463916 TICAM1Q8IUC6 712 aa11.93□□□□□ -0.5
XRN1-203ENST00000463916 TMEM251Q8N6I4 163 aa11.93□□□□□ -0.5
XRN1-203ENST00000463916 AGR3Q8TD06 166 aa11.93□□□□□ -0.5
XRN1-203ENST00000463916 PHF12Q96QT6 1004 aa11.93□□□□□ -0.5
XRN1-203ENST00000463916 ITPAQ9BY32 194 aa11.93□□□□□ -0.5
XRN1-203ENST00000463916 ZDHHC11Q9H8X9 412 aa11.93□□□□□ -0.5
XRN1-203ENST00000463916 TRAF6Q9Y4K3 522 aa11.93□□□□□ -0.5
XRN1-203ENST00000463916 NPFFR2Q9Y5X5 522 aa11.93□□□□□ -0.5
XRN1-203ENST00000463916 NAV2Q8IVL1 2488 aa11.93□□□□□ -0.5
XRN1-203ENST00000463916 NINQ8N4C6 2090 aa11.93□□□□□ -0.5
XRN1-203ENST00000463916 RGS16O15492 202 aaPredicted RBP11.93□□□□□ -0.5
XRN1-203ENST00000463916 BPGMP07738 259 aa11.93□□□□□ -0.5
XRN1-203ENST00000463916 RFPL3SP0C7P2 107 aa11.93□□□□□ -0.5
XRN1-203ENST00000463916 PRPH2P23942 346 aa11.93□□□□□ -0.5
XRN1-203ENST00000463916 MAGEA5P43359 124 aa11.93□□□□□ -0.5
XRN1-203ENST00000463916 MPP2Q14168 576 aa11.93□□□□□ -0.5
XRN1-203ENST00000463916 RFTN2Q52LD8 501 aaPredicted RBP11.93□□□□□ -0.5
XRN1-203ENST00000463916 TNFAIP8L3Q5GJ75 292 aa11.93□□□□□ -0.5
XRN1-203ENST00000463916 C6orf163Q5TEZ5 329 aa11.93□□□□□ -0.5
XRN1-203ENST00000463916 HLA-DQA1Q5Y7H0 255 aa11.93□□□□□ -0.5
XRN1-203ENST00000463916 BNC2Q6ZN30 1099 aaPredicted RBP11.93□□□□□ -0.5
XRN1-203ENST00000463916 GK5Q6ZS86 529 aa11.93□□□□□ -0.5
XRN1-203ENST00000463916 TAGAPQ8N103 731 aa11.93□□□□□ -0.5
XRN1-203ENST00000463916 PKNOX2Q96KN3 472 aa11.93□□□□□ -0.5
XRN1-203ENST00000463916 MYNNQ9NPC7 610 aa11.93□□□□□ -0.5
XRN1-203ENST00000463916 PFDN4Q9NQP4 134 aa11.93□□□□□ -0.5
XRN1-203ENST00000463916 EHD3Q9NZN3 535 aa11.93□□□□□ -0.5
XRN1-203ENST00000463916 CNOT11Q9UKZ1 510 aaKnown RBP11.93□□□□□ -0.5
XRN1-203ENST00000463916 LIPGQ9Y5X9 500 aa11.93□□□□□ -0.5
XRN1-203ENST00000463916 NPIPB8E9PQR5 432 aa11.92□□□□□ -0.5
XRN1-203ENST00000463916 ADAM10O14672 748 aa11.92□□□□□ -0.5
XRN1-203ENST00000463916 ABOP16442 354 aa11.92□□□□□ -0.5
XRN1-203ENST00000463916 ABCD3P28288 659 aa11.92□□□□□ -0.5
XRN1-203ENST00000463916 PER3P56645 1201 aa11.92□□□□□ -0.5
XRN1-203ENST00000463916 ADORA2A-AS1P86434 159 aa11.92□□□□□ -0.5
XRN1-203ENST00000463916 CEP85LQ5SZL2 805 aa11.92□□□□□ -0.5
XRN1-203ENST00000463916 FBXW8Q8N3Y1 598 aa11.92□□□□□ -0.5
XRN1-203ENST00000463916 C17orf47Q8NEP4 570 aa11.92□□□□□ -0.5
XRN1-203ENST00000463916 FAM76AQ8TAV0 307 aa11.92□□□□□ -0.5
XRN1-203ENST00000463916 ZNF675Q8TD23 568 aa11.92□□□□□ -0.5
XRN1-203ENST00000463916 ITLN2Q8WWU7 325 aaPredicted RBP11.92□□□□□ -0.5
XRN1-203ENST00000463916 GFM2Q969S9 779 aaKnown RBP11.92□□□□□ -0.5
XRN1-203ENST00000463916 ZNF395Q9H8N7 513 aaPredicted RBP11.92□□□□□ -0.5
XRN1-203ENST00000463916 IL1RL2Q9HB29 575 aa11.92□□□□□ -0.5
XRN1-203ENST00000463916 LRTM1Q9HBL6 345 aa11.92□□□□□ -0.5
XRN1-203ENST00000463916 C1orf109Q9NX04 203 aa11.92□□□□□ -0.5
XRN1-203ENST00000463916 GIMAP2Q9UG22 337 aa11.92□□□□□ -0.5
XRN1-203ENST00000463916 ZDHHC2Q9UIJ5 367 aa11.92□□□□□ -0.5
XRN1-203ENST00000463916 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.92□□□□□ -0.5
XRN1-203ENST00000463916 NCKAP5O14513 1909 aa11.92□□□□□ -0.5
XRN1-203ENST00000463916 ITPR2Q14571 2701 aa11.92□□□□□ -0.5
XRN1-203ENST00000463916 DNAJC13O75165 2243 aa11.92□□□□□ -0.5
XRN1-203ENST00000463916 MYO1GB0I1T2 1018 aa11.91□□□□□ -0.5
XRN1-203ENST00000463916 SLC28A1O00337 649 aa11.91□□□□□ -0.5
XRN1-203ENST00000463916 PIP5K1BO14986 540 aa11.91□□□□□ -0.5
XRN1-203ENST00000463916 LSM1O15116 133 aaKnown RBP11.91□□□□□ -0.5
XRN1-203ENST00000463916 RGS14O43566 566 aa11.91□□□□□ -0.5
XRN1-203ENST00000463916 PTGS2P35354 604 aa11.91□□□□□ -0.5
XRN1-203ENST00000463916 RPS6KA2Q15349 733 aa11.91□□□□□ -0.5
XRN1-203ENST00000463916 HYAL4Q2M3T9 481 aa11.91□□□□□ -0.5
XRN1-203ENST00000463916 SH2D4BQ5SQS7 431 aa11.91□□□□□ -0.5
XRN1-203ENST00000463916 RNF165Q6ZSG1 346 aa11.91□□□□□ -0.5
XRN1-203ENST00000463916 SLC22A16Q86VW1 577 aa11.91□□□□□ -0.5
XRN1-203ENST00000463916 DND1Q8IYX4 353 aaKnown RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms