RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 UBFD1O14562 309 aaKnown RBP3.41□□□□□ -1.86
SCFD1-204ENST00000463622 COPEO14579 308 aa3.41□□□□□ -1.86
SCFD1-204ENST00000463622 POLR3GO15318 223 aaPredicted RBP3.41□□□□□ -1.86
SCFD1-204ENST00000463622 PRPF4O43172 522 aaKnown RBP eCLIP3.41□□□□□ -1.86
SCFD1-204ENST00000463622 ATP8B1O43520 1251 aa3.41□□□□□ -1.86
SCFD1-204ENST00000463622 RRP9O43818 475 aaKnown RBP3.41□□□□□ -1.86
SCFD1-204ENST00000463622 DPM1O60762 260 aa3.41□□□□□ -1.86
SCFD1-204ENST00000463622 GLRA3O75311 464 aa3.41□□□□□ -1.86
SCFD1-204ENST00000463622 PSIP1O75475 530 aaKnown RBP3.41□□□□□ -1.86
SCFD1-204ENST00000463622 C1orf105O95561 183 aa3.41□□□□□ -1.86
SCFD1-204ENST00000463622 GUCA1CO95843 209 aa3.41□□□□□ -1.86
SCFD1-204ENST00000463622 PYGLP06737 847 aa3.41□□□□□ -1.86
SCFD1-204ENST00000463622 CHRNGP07510 517 aa3.41□□□□□ -1.86
SCFD1-204ENST00000463622 CHRM5P08912 532 aaPredicted RBP3.41□□□□□ -1.86
SCFD1-204ENST00000463622 MPC1LP0DKB6 136 aa3.41□□□□□ -1.86
SCFD1-204ENST00000463622 BGNP21810 368 aa3.41□□□□□ -1.86
SCFD1-204ENST00000463622 CNTFP26441 200 aa3.41□□□□□ -1.86
SCFD1-204ENST00000463622 IMPA1P29218 277 aa3.41□□□□□ -1.86
SCFD1-204ENST00000463622 CRABP2P29373 138 aa3.41□□□□□ -1.86
SCFD1-204ENST00000463622 PRDX3P30048 256 aaKnown RBP3.41□□□□□ -1.86
SCFD1-204ENST00000463622 CCL11P51671 97 aa3.41□□□□□ -1.86
SCFD1-204ENST00000463622 CDH13P55290 713 aa3.41□□□□□ -1.86
SCFD1-204ENST00000463622 UBE2IP63279 158 aaKnown RBP3.41□□□□□ -1.86
SCFD1-204ENST00000463622 SF3A3Q12874 501 aaKnown RBP eCLIP3.41□□□□□ -1.86
SCFD1-204ENST00000463622 ILF3Q12906 894 aaKnown RBP eCLIP3.41□□□□□ -1.86
SCFD1-204ENST00000463622 IL11RAQ14626 422 aa3.41□□□□□ -1.86
SCFD1-204ENST00000463622 SEC23BQ15437 767 aa3.41□□□□□ -1.86
SCFD1-204ENST00000463622 SYTL3Q4VX76 610 aa3.41□□□□□ -1.86
SCFD1-204ENST00000463622 UNC50Q53HI1 259 aa3.41□□□□□ -1.86
SCFD1-204ENST00000463622 PLEKHS1Q5SXH7 462 aa3.41□□□□□ -1.86
SCFD1-204ENST00000463622 AWAT2Q6E213 333 aa3.41□□□□□ -1.86
SCFD1-204ENST00000463622 ADNP2Q6IQ32 1131 aa3.41□□□□□ -1.86
SCFD1-204ENST00000463622 CGB2Q6NT52 195 aa3.41□□□□□ -1.86
SCFD1-204ENST00000463622 PTCHD4Q6ZW05 846 aa3.41□□□□□ -1.86
SCFD1-204ENST00000463622 C10orf107Q8IVU9 208 aa3.41□□□□□ -1.86
SCFD1-204ENST00000463622 SFRP1Q8N474 314 aa3.41□□□□□ -1.86
SCFD1-204ENST00000463622 PTGR2Q8N8N7 351 aaPredicted RBP3.41□□□□□ -1.86
SCFD1-204ENST00000463622 NRACQ8N912 160 aa3.41□□□□□ -1.86
SCFD1-204ENST00000463622 OR6Y1Q8NGX8 325 aa3.41□□□□□ -1.86
SCFD1-204ENST00000463622 OR10G6Q8NH81 332 aa3.41□□□□□ -1.86
SCFD1-204ENST00000463622 FLVCR1-AS1Q8TAF5 88 aa3.41□□□□□ -1.86
SCFD1-204ENST00000463622 KIAA1191Q96A73 305 aa3.41□□□□□ -1.86
SCFD1-204ENST00000463622 MTBPQ96DY7 904 aa3.41□□□□□ -1.86
SCFD1-204ENST00000463622 PHF21BQ96EK2 531 aa3.41□□□□□ -1.86
SCFD1-204ENST00000463622 C12orf66Q96MD2 445 aa3.41□□□□□ -1.86
SCFD1-204ENST00000463622 PANX3Q96QZ0 392 aa3.41□□□□□ -1.86
SCFD1-204ENST00000463622 OR4K3Q96R72 315 aa3.41□□□□□ -1.86
SCFD1-204ENST00000463622 RUFY1Q96T51 708 aa3.41□□□□□ -1.86
SCFD1-204ENST00000463622 TBC1D10AQ9BXI6 508 aa3.41□□□□□ -1.86
SCFD1-204ENST00000463622 SHCBP1LQ9BZQ2 653 aa3.41□□□□□ -1.86
SCFD1-204ENST00000463622 TWSG1Q9GZX9 223 aa3.41□□□□□ -1.86
SCFD1-204ENST00000463622 ATG10Q9H0Y0 220 aa3.41□□□□□ -1.86
SCFD1-204ENST00000463622 ING2Q9H160 280 aa3.41□□□□□ -1.86
SCFD1-204ENST00000463622 CCDC68Q9H2F9 335 aa3.41□□□□□ -1.86
SCFD1-204ENST00000463622 RABEP2Q9H5N1 569 aa3.41□□□□□ -1.86
SCFD1-204ENST00000463622 NMRAL1Q9HBL8 299 aa3.41□□□□□ -1.86
SCFD1-204ENST00000463622 POPDC3Q9HBV1 291 aa3.41□□□□□ -1.86
SCFD1-204ENST00000463622 KCNK9Q9NPC2 374 aa3.41□□□□□ -1.86
SCFD1-204ENST00000463622 IMP3Q9NV31 184 aaKnown RBP3.41□□□□□ -1.86
SCFD1-204ENST00000463622 ASF1BQ9NVP2 202 aa3.41□□□□□ -1.86
SCFD1-204ENST00000463622 SPHK1Q9NYA1 384 aa3.41□□□□□ -1.86
SCFD1-204ENST00000463622 OGFRQ9NZT2 677 aa3.41□□□□□ -1.86
SCFD1-204ENST00000463622 MGAT4CQ9UBM8 478 aa3.41□□□□□ -1.86
SCFD1-204ENST00000463622 CORO1CQ9ULV4 474 aaPredicted RBP3.41□□□□□ -1.86
SCFD1-204ENST00000463622 ICKQ9UPZ9 632 aa3.41□□□□□ -1.86
SCFD1-204ENST00000463622 KLHL20Q9Y2M5 609 aa3.41□□□□□ -1.86
SCFD1-204ENST00000463622 IKBKGQ9Y6K9 419 aa3.41□□□□□ -1.86
SCFD1-204ENST00000463622 PIKFYVEQ9Y2I7 2098 aa3.41□□□□□ -1.86
SCFD1-204ENST00000463622 TACC2O95359 2948 aa3.41□□□□□ -1.86
SCFD1-204ENST00000463622 C17orf113A0A1B0GUU1 675 aa3.4□□□□□ -1.86
SCFD1-204ENST00000463622 CCDC189A1A4V9 331 aa3.4□□□□□ -1.86
SCFD1-204ENST00000463622 A8MU76 341 aa3.4□□□□□ -1.86
SCFD1-204ENST00000463622 SUPT3HB4E1H0 165 aa3.4□□□□□ -1.86
SCFD1-204ENST00000463622 BTN3A3O00478 584 aa3.4□□□□□ -1.86
SCFD1-204ENST00000463622 LIN7AO14910 233 aaPredicted RBP3.4□□□□□ -1.86
SCFD1-204ENST00000463622 DSCR3O14972 297 aa3.4□□□□□ -1.86
SCFD1-204ENST00000463622 TOX3O15405 576 aaPredicted RBP3.4□□□□□ -1.86
SCFD1-204ENST00000463622 HCRTR1O43613 425 aa3.4□□□□□ -1.86
SCFD1-204ENST00000463622 KLK8O60259 260 aa3.4□□□□□ -1.86
SCFD1-204ENST00000463622 KERAO60938 352 aa3.4□□□□□ -1.86
SCFD1-204ENST00000463622 SUPT3HO75486 399 aa3.4□□□□□ -1.86
SCFD1-204ENST00000463622 NTN1O95631 604 aa3.4□□□□□ -1.86
SCFD1-204ENST00000463622 SLC16A8O95907 504 aa3.4□□□□□ -1.86
SCFD1-204ENST00000463622 SCGB1D2O95969 90 aa3.4□□□□□ -1.86
SCFD1-204ENST00000463622 C9P02748 559 aa3.4□□□□□ -1.86
SCFD1-204ENST00000463622 APOA4P06727 396 aa3.4□□□□□ -1.86
SCFD1-204ENST00000463622 BPGMP07738 259 aa3.4□□□□□ -1.86
SCFD1-204ENST00000463622 RPS17P08708 135 aaKnown RBP3.4□□□□□ -1.86
SCFD1-204ENST00000463622 RALBP11234 206 aa3.4□□□□□ -1.86
SCFD1-204ENST00000463622 FGF5P12034 268 aa3.4□□□□□ -1.86
SCFD1-204ENST00000463622 F3P13726 295 aa3.4□□□□□ -1.86
SCFD1-204ENST00000463622 APEHP13798 732 aaKnown RBP3.4□□□□□ -1.86
SCFD1-204ENST00000463622 CD22P20273 847 aa3.4□□□□□ -1.86
SCFD1-204ENST00000463622 PTGER4P35408 488 aa3.4□□□□□ -1.86
SCFD1-204ENST00000463622 HSPA7P48741 367 aa3.4□□□□□ -1.86
SCFD1-204ENST00000463622 HTR6P50406 440 aa3.4□□□□□ -1.86
SCFD1-204ENST00000463622 SLC12A2P55011 1212 aa3.4□□□□□ -1.86
SCFD1-204ENST00000463622 FOXA1P55317 472 aa3.4□□□□□ -1.86
SCFD1-204ENST00000463622 TIRAPP58753 221 aa3.4□□□□□ -1.86
SCFD1-204ENST00000463622 RPS16P62249 146 aaKnown RBP3.4□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms