RNA–Protein interactions for RNA: ENST00000463487.1

COL9A3-204, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-204ENST00000463487 TNFSF10P50591 281 aa18.35■□□□□ 0.53
COL9A3-204ENST00000463487 HLCSP50747 726 aa18.35■□□□□ 0.53
COL9A3-204ENST00000463487 PSPHP78330 225 aa18.35■□□□□ 0.53
COL9A3-204ENST00000463487 MGAT2Q10469 447 aa18.35■□□□□ 0.53
COL9A3-204ENST00000463487 TUBA3CQ13748 450 aa18.35■□□□□ 0.53
COL9A3-204ENST00000463487 EXOSC7Q15024 291 aaKnown RBP18.35■□□□□ 0.53
COL9A3-204ENST00000463487 TRMT12Q53H54 448 aaKnown RBP18.35■□□□□ 0.53
COL9A3-204ENST00000463487 ZNF385BQ569K4 471 aa18.35■□□□□ 0.53
COL9A3-204ENST00000463487 ANXA8L1Q5VT79 327 aa18.35■□□□□ 0.53
COL9A3-204ENST00000463487 TUBA3EQ6PEY2 450 aa18.35■□□□□ 0.53
COL9A3-204ENST00000463487 TMEM107Q6UX40 140 aa18.35■□□□□ 0.53
COL9A3-204ENST00000463487 AMER2Q8N7J2 671 aa18.35■□□□□ 0.53
COL9A3-204ENST00000463487 GLB1L3Q8NCI6 653 aaPredicted RBP18.35■□□□□ 0.53
COL9A3-204ENST00000463487 C16orf52Q8NHV5 167 aa18.35■□□□□ 0.53
COL9A3-204ENST00000463487 OR5P2Q8WZ92 322 aa18.35■□□□□ 0.53
COL9A3-204ENST00000463487 C5orf34Q96MH7 638 aa18.35■□□□□ 0.53
COL9A3-204ENST00000463487 OR52B2Q96RD2 323 aa18.35■□□□□ 0.53
COL9A3-204ENST00000463487 NPAS2Q99743 824 aa18.35■□□□□ 0.53
COL9A3-204ENST00000463487 MFRPQ9BY79 579 aa18.35■□□□□ 0.53
COL9A3-204ENST00000463487 HPF1Q9NWY4 346 aa18.35■□□□□ 0.53
COL9A3-204ENST00000463487 PLA2G3Q9NZ20 509 aa18.35■□□□□ 0.53
COL9A3-204ENST00000463487 PCDHGB4Q9UN71 923 aa18.35■□□□□ 0.53
COL9A3-204ENST00000463487 TRIM33Q9UPN9 1127 aa18.35■□□□□ 0.53
COL9A3-204ENST00000463487 PIEZO2Q9H5I5 2752 aa18.34■□□□□ 0.53
COL9A3-204ENST00000463487 CBX7O95931 251 aa18.34■□□□□ 0.53
COL9A3-204ENST00000463487 LAMP1P11279 417 aa18.34■□□□□ 0.53
COL9A3-204ENST00000463487 CD46P15529 392 aa18.34■□□□□ 0.53
COL9A3-204ENST00000463487 S1PR1P21453 382 aa18.34■□□□□ 0.53
COL9A3-204ENST00000463487 PTGER1P34995 402 aa18.34■□□□□ 0.53
COL9A3-204ENST00000463487 MC3RP41968 323 aa18.34■□□□□ 0.53
COL9A3-204ENST00000463487 TMED10P49755 219 aaKnown RBP18.34■□□□□ 0.53
COL9A3-204ENST00000463487 ZNHIT3Q15649 155 aaPredicted RBP18.34■□□□□ 0.53
COL9A3-204ENST00000463487 NADK2Q4G0N4 442 aa18.34■□□□□ 0.53
COL9A3-204ENST00000463487 PDCD4Q53EL6 469 aaKnown RBP18.34■□□□□ 0.53
COL9A3-204ENST00000463487 PIGGQ5H8A4 983 aa18.34■□□□□ 0.53
COL9A3-204ENST00000463487 ZNF551Q7Z340 670 aaPredicted RBP18.34■□□□□ 0.53
COL9A3-204ENST00000463487 MIER2Q8N344 545 aa18.34■□□□□ 0.53
COL9A3-204ENST00000463487 OR8J2Q8NGG1 315 aa18.34■□□□□ 0.53
COL9A3-204ENST00000463487 ELP4Q96EB1 424 aa18.34■□□□□ 0.53
COL9A3-204ENST00000463487 RILPQ96NA2 401 aa18.34■□□□□ 0.53
COL9A3-204ENST00000463487 RASL10BQ96S79 203 aa18.34■□□□□ 0.53
COL9A3-204ENST00000463487 CLMPQ9H6B4 373 aa18.34■□□□□ 0.53
COL9A3-204ENST00000463487 LRFN1Q9P244 771 aa18.34■□□□□ 0.53
COL9A3-204ENST00000463487 ERVK-11Q9UQG0 969 aa18.34■□□□□ 0.53
COL9A3-204ENST00000463487 GPR45Q9Y5Y3 372 aa18.34■□□□□ 0.53
COL9A3-204ENST00000463487 NBEAQ8NFP9 2946 aa18.33■□□□□ 0.53
COL9A3-204ENST00000463487 ACOX3O15254 700 aa18.33■□□□□ 0.52
COL9A3-204ENST00000463487 CFLARO15519 480 aa18.33■□□□□ 0.52
COL9A3-204ENST00000463487 MAN1A2O60476 641 aa18.33■□□□□ 0.52
COL9A3-204ENST00000463487 SLC22A3O75751 556 aa18.33■□□□□ 0.52
COL9A3-204ENST00000463487 F10P00742 488 aa18.33■□□□□ 0.52
COL9A3-204ENST00000463487 CLPSP04118 112 aa18.33■□□□□ 0.52
COL9A3-204ENST00000463487 S100A3P33764 101 aa18.33■□□□□ 0.52
COL9A3-204ENST00000463487 CD96P40200 585 aa18.33■□□□□ 0.52
COL9A3-204ENST00000463487 CD97P48960 835 aa18.33■□□□□ 0.52
COL9A3-204ENST00000463487 PRR5P85299 388 aa18.33■□□□□ 0.52
COL9A3-204ENST00000463487 LRRC74AQ0VAA2 488 aa18.33■□□□□ 0.52
COL9A3-204ENST00000463487 C19orf57Q0VDD7 668 aa18.33■□□□□ 0.52
COL9A3-204ENST00000463487 OR1C1Q15619 314 aa18.33■□□□□ 0.52
COL9A3-204ENST00000463487 INAQ16352 499 aa18.33■□□□□ 0.52
COL9A3-204ENST00000463487 PRSS53Q2L4Q9 553 aa18.33■□□□□ 0.52
COL9A3-204ENST00000463487 SZRD1Q7Z422 152 aa18.33■□□□□ 0.52
COL9A3-204ENST00000463487 CYP4Z2PQ8N1L4 340 aa18.33■□□□□ 0.52
COL9A3-204ENST00000463487 OR2L13Q8N349 312 aa18.33■□□□□ 0.52
COL9A3-204ENST00000463487 TMEM178AQ8NBL3 297 aa18.33■□□□□ 0.52
COL9A3-204ENST00000463487 OR7G2Q8NG99 324 aa18.33■□□□□ 0.52
COL9A3-204ENST00000463487 TRIM45Q9H8W5 580 aaPredicted RBP18.33■□□□□ 0.52
COL9A3-204ENST00000463487 LIN28AQ9H9Z2 209 aaKnown RBP18.33■□□□□ 0.52
COL9A3-204ENST00000463487 SDR39U1Q9NRG7 319 aaPredicted RBP18.33■□□□□ 0.52
COL9A3-204ENST00000463487 MRGBPQ9NV56 204 aa18.33■□□□□ 0.52
COL9A3-204ENST00000463487 FGFR1OP2Q9NVK5 253 aa18.33■□□□□ 0.52
COL9A3-204ENST00000463487 ANKRD10Q9NXR5 420 aa18.33■□□□□ 0.52
COL9A3-204ENST00000463487 ZIM2Q9NZV7 527 aa18.33■□□□□ 0.52
COL9A3-204ENST00000463487 DCTN4Q9UJW0 460 aa18.33■□□□□ 0.52
COL9A3-204ENST00000463487 C19orf53Q9UNZ5 99 aaPredicted RBP18.33■□□□□ 0.52
COL9A3-204ENST00000463487 ZFYVE26Q68DK2 2539 aa18.33■□□□□ 0.52
COL9A3-204ENST00000463487 A0A0G2JND7 137 aa18.32■□□□□ 0.52
COL9A3-204ENST00000463487 TMEM200CA6NKL6 621 aa18.32■□□□□ 0.52
COL9A3-204ENST00000463487 TTC36A6NLP5 189 aa18.32■□□□□ 0.52
COL9A3-204ENST00000463487 B8ZZF3 427 aa18.32■□□□□ 0.52
COL9A3-204ENST00000463487 RNASET2O00584 256 aaKnown RBP18.32■□□□□ 0.52
COL9A3-204ENST00000463487 ANKRD28O15084 1053 aa18.32■□□□□ 0.52
COL9A3-204ENST00000463487 GPX3P22352 226 aa18.32■□□□□ 0.52
COL9A3-204ENST00000463487 NR0B1P51843 470 aaKnown RBP18.32■□□□□ 0.52
COL9A3-204ENST00000463487 NME5P56597 212 aa18.32■□□□□ 0.52
COL9A3-204ENST00000463487 ZNF155Q12901 538 aaPredicted RBP18.32■□□□□ 0.52
COL9A3-204ENST00000463487 BHLHB9Q6PI77 547 aa18.32■□□□□ 0.52
COL9A3-204ENST00000463487 ZNF843Q8N446 348 aa18.32■□□□□ 0.52
COL9A3-204ENST00000463487 FAM98AQ8NCA5 519 aaKnown RBP18.32■□□□□ 0.52
COL9A3-204ENST00000463487 HSPBAP1Q96EW2 488 aa18.32■□□□□ 0.52
COL9A3-204ENST00000463487 THOC1Q96FV9 657 aaKnown RBP18.32■□□□□ 0.52
COL9A3-204ENST00000463487 MAGED4Q96JG8 741 aa18.32■□□□□ 0.52
COL9A3-204ENST00000463487 SGCZQ96LD1 299 aa18.32■□□□□ 0.52
COL9A3-204ENST00000463487 EBF4Q9BQW3 602 aa18.32■□□□□ 0.52
COL9A3-204ENST00000463487 ITPAQ9BY32 194 aa18.32■□□□□ 0.52
COL9A3-204ENST00000463487 TIMMDC1Q9NPL8 285 aa18.32■□□□□ 0.52
COL9A3-204ENST00000463487 FAM120CQ9NX05 1096 aaKnown RBP18.32■□□□□ 0.52
COL9A3-204ENST00000463487 RALYQ9UKM9 306 aaKnown RBP18.32■□□□□ 0.52
COL9A3-204ENST00000463487 PCDHGB6Q9Y5F9 930 aa18.32■□□□□ 0.52
COL9A3-204ENST00000463487 IGSF10Q6WRI0 2623 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms