RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 PSMD12O00232 456 aaPredicted RBP6.95□□□□□ -1.3
UBE4B-204ENST00000462658 LSM1O15116 133 aaKnown RBP6.95□□□□□ -1.3
UBE4B-204ENST00000462658 KRT34O76011 436 aa6.95□□□□□ -1.3
UBE4B-204ENST00000462658 VIPP01282 170 aa6.95□□□□□ -1.3
UBE4B-204ENST00000462658 ALDOCP09972 364 aaKnown RBP6.95□□□□□ -1.3
UBE4B-204ENST00000462658 THRAP10827 490 aa6.95□□□□□ -1.3
UBE4B-204ENST00000462658 CDH1P12830 882 aa6.95□□□□□ -1.3
UBE4B-204ENST00000462658 COX4I1P13073 169 aa6.95□□□□□ -1.3
UBE4B-204ENST00000462658 SLC2A4P14672 509 aa6.95□□□□□ -1.3
UBE4B-204ENST00000462658 XRCC1P18887 633 aaPredicted RBP6.95□□□□□ -1.3
UBE4B-204ENST00000462658 WT1P19544 449 aaPredicted RBP6.95□□□□□ -1.3
UBE4B-204ENST00000462658 SHMT2P34897 504 aa6.95□□□□□ -1.3
UBE4B-204ENST00000462658 DHPSP49366 369 aaPredicted RBP6.95□□□□□ -1.3
UBE4B-204ENST00000462658 RASSF2P50749 326 aa6.95□□□□□ -1.3
UBE4B-204ENST00000462658 ATP4BP51164 291 aa6.95□□□□□ -1.3
UBE4B-204ENST00000462658 STX1BP61266 288 aa6.95□□□□□ -1.3
UBE4B-204ENST00000462658 NCALDP61601 193 aa6.95□□□□□ -1.3
UBE4B-204ENST00000462658 SUMO2P61956 95 aaKnown RBP6.95□□□□□ -1.3
UBE4B-204ENST00000462658 ERVK-8P63133 956 aa6.95□□□□□ -1.3
UBE4B-204ENST00000462658 IRX1P78414 480 aaPredicted RBP6.95□□□□□ -1.3
UBE4B-204ENST00000462658 HMGCS1Q01581 520 aa6.95□□□□□ -1.3
UBE4B-204ENST00000462658 EMX2Q04743 252 aa6.95□□□□□ -1.3
UBE4B-204ENST00000462658 ZNF33BQ06732 778 aa6.95□□□□□ -1.3
UBE4B-204ENST00000462658 PRDX1Q06830 199 aaKnown RBP6.95□□□□□ -1.3
UBE4B-204ENST00000462658 SRSF5Q13243 272 aaKnown RBP6.95□□□□□ -1.3
UBE4B-204ENST00000462658 CYLC2Q14093 348 aaPredicted RBP6.95□□□□□ -1.3
UBE4B-204ENST00000462658 SQLEQ14534 574 aa6.95□□□□□ -1.3
UBE4B-204ENST00000462658 KIR2DS5Q14953 304 aa6.95□□□□□ -1.3
UBE4B-204ENST00000462658 NAA25Q14CX7 972 aa6.95□□□□□ -1.3
UBE4B-204ENST00000462658 RPS6KA2Q15349 733 aa6.95□□□□□ -1.3
UBE4B-204ENST00000462658 ELOCQ15369 112 aa6.95□□□□□ -1.3
UBE4B-204ENST00000462658 GSTA3Q16772 222 aa6.95□□□□□ -1.3
UBE4B-204ENST00000462658 KIF19Q2TAC6 998 aa6.95□□□□□ -1.3
UBE4B-204ENST00000462658 SMU1Q2TAY7 513 aa6.95□□□□□ -1.3
UBE4B-204ENST00000462658 AP5B1Q2VPB7 878 aa6.95□□□□□ -1.3
UBE4B-204ENST00000462658 RNASE12Q5GAN4 147 aaKnown RBP6.95□□□□□ -1.3
UBE4B-204ENST00000462658 PAGE2BQ5JRK9 111 aa6.95□□□□□ -1.3
UBE4B-204ENST00000462658 LYSMD4Q5XG99 296 aa6.95□□□□□ -1.3
UBE4B-204ENST00000462658 MED27Q6P2C8 311 aa6.95□□□□□ -1.3
UBE4B-204ENST00000462658 PTCHD4Q6ZW05 846 aa6.95□□□□□ -1.3
UBE4B-204ENST00000462658 SLC9B2Q86UD5 537 aa6.95□□□□□ -1.3
UBE4B-204ENST00000462658 AMIGO1Q86WK6 493 aa6.95□□□□□ -1.3
UBE4B-204ENST00000462658 GKN2Q86XP6 184 aa6.95□□□□□ -1.3
UBE4B-204ENST00000462658 FNDC5Q8NAU1 212 aa6.95□□□□□ -1.3
UBE4B-204ENST00000462658 OR7G3Q8NG95 312 aa6.95□□□□□ -1.3
UBE4B-204ENST00000462658 OR4E2Q8NGC2 313 aa6.95□□□□□ -1.3
UBE4B-204ENST00000462658 SUN3Q8TAQ9 357 aa6.95□□□□□ -1.3
UBE4B-204ENST00000462658 WDR20Q8TBZ3 569 aa6.95□□□□□ -1.3
UBE4B-204ENST00000462658 LMX1AQ8TE12 382 aa6.95□□□□□ -1.3
UBE4B-204ENST00000462658 LCN9Q8WX39 176 aa6.95□□□□□ -1.3
UBE4B-204ENST00000462658 PATE1Q8WXA2 126 aa6.95□□□□□ -1.3
UBE4B-204ENST00000462658 MUL1Q969V5 352 aa6.95□□□□□ -1.3
UBE4B-204ENST00000462658 SARAFQ96BY9 339 aa6.95□□□□□ -1.3
UBE4B-204ENST00000462658 REPS1Q96D71 796 aa6.95□□□□□ -1.3
UBE4B-204ENST00000462658 CMTM5Q96DZ9 223 aa6.95□□□□□ -1.3
UBE4B-204ENST00000462658 LRRC61Q9BV99 259 aa6.95□□□□□ -1.3
UBE4B-204ENST00000462658 ACPTQ9BZG2 426 aa6.95□□□□□ -1.3
UBE4B-204ENST00000462658 PELI2Q9HAT8 420 aa6.95□□□□□ -1.3
UBE4B-204ENST00000462658 SLC40A1Q9NP59 571 aa6.95□□□□□ -1.3
UBE4B-204ENST00000462658 POT1Q9NUX5 634 aa6.95□□□□□ -1.3
UBE4B-204ENST00000462658 OR6C2Q9NZP2 312 aa6.95□□□□□ -1.3
UBE4B-204ENST00000462658 SPASTQ9UBP0 616 aa6.95□□□□□ -1.3
UBE4B-204ENST00000462658 STEAP1Q9UHE8 339 aa6.95□□□□□ -1.3
UBE4B-204ENST00000462658 ZFC3H1O60293 1989 aaKnown RBP6.95□□□□□ -1.3
UBE4B-204ENST00000462658 EP300Q09472 2414 aaPredicted RBP6.94□□□□□ -1.3
UBE4B-204ENST00000462658 A0A1B0GVT2 93 aa6.94□□□□□ -1.3
UBE4B-204ENST00000462658 SEC22BO75396 215 aa6.94□□□□□ -1.3
UBE4B-204ENST00000462658 CHRM5P08912 532 aaPredicted RBP6.94□□□□□ -1.3
UBE4B-204ENST00000462658 PCNAP12004 261 aa6.94□□□□□ -1.3
UBE4B-204ENST00000462658 HSD3B1P14060 373 aa6.94□□□□□ -1.3
UBE4B-204ENST00000462658 IDO1P14902 403 aa6.94□□□□□ -1.3
UBE4B-204ENST00000462658 GNSP15586 552 aa6.94□□□□□ -1.3
UBE4B-204ENST00000462658 CD1EP15812 388 aa6.94□□□□□ -1.3
UBE4B-204ENST00000462658 GPX3P22352 226 aa6.94□□□□□ -1.3
UBE4B-204ENST00000462658 PSMB5P28074 263 aa6.94□□□□□ -1.3
UBE4B-204ENST00000462658 PTPN4P29074 926 aa6.94□□□□□ -1.3
UBE4B-204ENST00000462658 CPA2P48052 419 aa6.94□□□□□ -1.3
UBE4B-204ENST00000462658 DIO1P49895 249 aa6.94□□□□□ -1.3
UBE4B-204ENST00000462658 CCR8P51685 355 aa6.94□□□□□ -1.3
UBE4B-204ENST00000462658 MNAT1P51948 309 aa6.94□□□□□ -1.3
UBE4B-204ENST00000462658 DIO3P55073 304 aa6.94□□□□□ -1.3
UBE4B-204ENST00000462658 NME5P56597 212 aa6.94□□□□□ -1.3
UBE4B-204ENST00000462658 HNRNPKP61978 463 aaKnown RBP eCLIP6.94□□□□□ -1.3
UBE4B-204ENST00000462658 UBE2IP63279 158 aaKnown RBP6.94□□□□□ -1.3
UBE4B-204ENST00000462658 ABATP80404 500 aa6.94□□□□□ -1.3
UBE4B-204ENST00000462658 ACTN3Q08043 901 aaPredicted RBP6.94□□□□□ -1.3
UBE4B-204ENST00000462658 CSTF3Q12996 717 aaKnown RBP6.94□□□□□ -1.3
UBE4B-204ENST00000462658 MAD2L1Q13257 205 aaPredicted RBP6.94□□□□□ -1.3
UBE4B-204ENST00000462658 BIRC2Q13490 618 aa6.94□□□□□ -1.3
UBE4B-204ENST00000462658 DDX39BQ13838 428 aaKnown RBP6.94□□□□□ -1.3
UBE4B-204ENST00000462658 HERC3Q15034 1050 aa6.94□□□□□ -1.3
UBE4B-204ENST00000462658 RBBP5Q15291 538 aaKnown RBP6.94□□□□□ -1.3
UBE4B-204ENST00000462658 MAPKAPK3Q16644 382 aa6.94□□□□□ -1.3
UBE4B-204ENST00000462658 PLK5Q496M5 336 aa6.94□□□□□ -1.3
UBE4B-204ENST00000462658 RFTN2Q52LD8 501 aaPredicted RBP6.94□□□□□ -1.3
UBE4B-204ENST00000462658 AGKQ53H12 422 aa6.94□□□□□ -1.3
UBE4B-204ENST00000462658 IL23RQ5VWK5 629 aa6.94□□□□□ -1.3
UBE4B-204ENST00000462658 PMS2CLQ68D20 193 aa6.94□□□□□ -1.3
UBE4B-204ENST00000462658 RINLQ6ZS11 566 aa6.94□□□□□ -1.3
UBE4B-204ENST00000462658 ASRGL1Q7L266 308 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms