RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 MCM8Q9UJA3 840 aa17.39■□□□□ 0.37
VARS-220ENST00000461874 DTX4Q9Y2E6 619 aa17.39■□□□□ 0.37
VARS-220ENST00000461874 NINQ8N4C6 2090 aa17.39■□□□□ 0.37
VARS-220ENST00000461874 WDR1O75083 606 aa17.38■□□□□ 0.37
VARS-220ENST00000461874 TOXO94900 526 aa17.38■□□□□ 0.37
VARS-220ENST00000461874 SNX4O95219 450 aa17.38■□□□□ 0.37
VARS-220ENST00000461874 ENO1P06733 434 aaKnown RBP17.38■□□□□ 0.37
VARS-220ENST00000461874 GLI4P10075 376 aa17.38■□□□□ 0.37
VARS-220ENST00000461874 ABCD3P28288 659 aa17.38■□□□□ 0.37
VARS-220ENST00000461874 HMOX2P30519 316 aa17.38■□□□□ 0.37
VARS-220ENST00000461874 SSTR2P30874 369 aa17.38■□□□□ 0.37
VARS-220ENST00000461874 ALDH9A1P49189 494 aa17.38■□□□□ 0.37
VARS-220ENST00000461874 HTR6P50406 440 aa17.38■□□□□ 0.37
VARS-220ENST00000461874 PKNOX1P55347 436 aa17.38■□□□□ 0.37
VARS-220ENST00000461874 DUSP2Q05923 314 aa17.38■□□□□ 0.37
VARS-220ENST00000461874 TFF3Q07654 80 aa17.38■□□□□ 0.37
VARS-220ENST00000461874 DUSP8Q13202 625 aa17.38■□□□□ 0.37
VARS-220ENST00000461874 WLSQ5T9L3 541 aa17.38■□□□□ 0.37
VARS-220ENST00000461874 TMEM198Q66K66 360 aa17.38■□□□□ 0.37
VARS-220ENST00000461874 BICRALQ6AI39 1079 aa17.38■□□□□ 0.37
VARS-220ENST00000461874 B3GNT6Q6ZMB0 384 aa17.38■□□□□ 0.37
VARS-220ENST00000461874 MEX3BQ6ZN04 569 aaKnown RBP17.38■□□□□ 0.37
VARS-220ENST00000461874 GSPT2Q8IYD1 628 aaKnown RBP17.38■□□□□ 0.37
VARS-220ENST00000461874 PRR22Q8IZ63 422 aa17.38■□□□□ 0.37
VARS-220ENST00000461874 LRRN4CLQ8ND94 238 aa17.38■□□□□ 0.37
VARS-220ENST00000461874 ADCY4Q8NFM4 1077 aa17.38■□□□□ 0.37
VARS-220ENST00000461874 CTHRC1Q96CG8 243 aa17.38■□□□□ 0.37
VARS-220ENST00000461874 LURAP1Q96LR2 239 aa17.38■□□□□ 0.37
VARS-220ENST00000461874 ZNF597Q96LX8 424 aa17.38■□□□□ 0.37
VARS-220ENST00000461874 ANGPTL4Q9BY76 406 aa17.38■□□□□ 0.37
VARS-220ENST00000461874 ACPTQ9BZG2 426 aa17.38■□□□□ 0.37
VARS-220ENST00000461874 NXF5Q9H1B4 397 aaKnown RBP17.38■□□□□ 0.37
VARS-220ENST00000461874 SLC6A15Q9H2J7 730 aa17.38■□□□□ 0.37
VARS-220ENST00000461874 KCNJ16Q9NPI9 418 aa17.38■□□□□ 0.37
VARS-220ENST00000461874 HEY2Q9UBP5 337 aa17.38■□□□□ 0.37
VARS-220ENST00000461874 EMCNQ9ULC0 261 aa17.38■□□□□ 0.37
VARS-220ENST00000461874 CFL2Q9Y281 166 aa17.38■□□□□ 0.37
VARS-220ENST00000461874 ZNF780BQ9Y6R6 833 aa17.38■□□□□ 0.37
VARS-220ENST00000461874 POLQO75417 2590 aa17.37■□□□□ 0.37
VARS-220ENST00000461874 A0A1W2PPM1 405 aa17.37■□□□□ 0.37
VARS-220ENST00000461874 NKX2-6A6NCS4 301 aa17.37■□□□□ 0.37
VARS-220ENST00000461874 FAM90A27PA6NNH2 459 aa17.37■□□□□ 0.37
VARS-220ENST00000461874 ESRRBO95718 433 aa17.37■□□□□ 0.37
VARS-220ENST00000461874 CBX7O95931 251 aa17.37■□□□□ 0.37
VARS-220ENST00000461874 ABCB1P08183 1280 aaPredicted RBP17.37■□□□□ 0.37
VARS-220ENST00000461874 HOXD4P09016 255 aaPredicted RBP17.37■□□□□ 0.37
VARS-220ENST00000461874 NAGAP17050 411 aa17.37■□□□□ 0.37
VARS-220ENST00000461874 IGFBP2P18065 325 aa17.37■□□□□ 0.37
VARS-220ENST00000461874 RPP38P78345 283 aaKnown RBP17.37■□□□□ 0.37
VARS-220ENST00000461874 RAE1P78406 368 aaKnown RBP17.37■□□□□ 0.37
VARS-220ENST00000461874 EXOSC7Q15024 291 aaKnown RBP17.37■□□□□ 0.37
VARS-220ENST00000461874 FAM180BQ6P0A1 224 aa17.37■□□□□ 0.37
VARS-220ENST00000461874 SH2D5Q6ZV89 423 aa17.37■□□□□ 0.37
VARS-220ENST00000461874 EIF1ADQ8N9N8 165 aaKnown RBP17.37■□□□□ 0.37
VARS-220ENST00000461874 SIMC1Q8NDZ2 872 aa17.37■□□□□ 0.37
VARS-220ENST00000461874 OR10Q1Q8NGQ4 319 aa17.37■□□□□ 0.37
VARS-220ENST00000461874 NEIL3Q8TAT5 605 aa17.37■□□□□ 0.37
VARS-220ENST00000461874 NTNG2Q96CW9 530 aa17.37■□□□□ 0.37
VARS-220ENST00000461874 C14orf79Q96F83 325 aa17.37■□□□□ 0.37
VARS-220ENST00000461874 RILPQ96NA2 401 aa17.37■□□□□ 0.37
VARS-220ENST00000461874 GSTO2Q9H4Y5 243 aa17.37■□□□□ 0.37
VARS-220ENST00000461874 BCAP29Q9UHQ4 241 aa17.37■□□□□ 0.37
VARS-220ENST00000461874 UTS2RQ9UKP6 389 aa17.37■□□□□ 0.37
VARS-220ENST00000461874 DLGAP4Q9Y2H0 992 aa17.37■□□□□ 0.37
VARS-220ENST00000461874 TIMM22Q9Y584 194 aa17.37■□□□□ 0.37
VARS-220ENST00000461874 PDZD2O15018 2839 aa17.37■□□□□ 0.37
VARS-220ENST00000461874 TACC2O95359 2948 aa17.37■□□□□ 0.37
VARS-220ENST00000461874 PHF3Q92576 2039 aaKnown RBP17.37■□□□□ 0.37
VARS-220ENST00000461874 CCDC151A5D8V7 595 aa17.36■□□□□ 0.37
VARS-220ENST00000461874 G3V2L1 256 aa17.36■□□□□ 0.37
VARS-220ENST00000461874 PCDH7O60245 1069 aa17.36■□□□□ 0.37
VARS-220ENST00000461874 IL3P08700 152 aa17.36■□□□□ 0.37
VARS-220ENST00000461874 DRD2P14416 443 aa17.36■□□□□ 0.37
VARS-220ENST00000461874 KRT15P19012 456 aa17.36■□□□□ 0.37
VARS-220ENST00000461874 GDF1P27539 372 aa17.36■□□□□ 0.37
VARS-220ENST00000461874 CASP3P42574 277 aa17.36■□□□□ 0.37
VARS-220ENST00000461874 HMGCS1Q01581 520 aa17.36■□□□□ 0.37
VARS-220ENST00000461874 ACSM2AQ08AH3 577 aa17.36■□□□□ 0.37
VARS-220ENST00000461874 LTB4RQ15722 352 aa17.36■□□□□ 0.37
VARS-220ENST00000461874 TRMT12Q53H54 448 aaKnown RBP17.36■□□□□ 0.37
VARS-220ENST00000461874 SPIN4Q56A73 249 aa17.36■□□□□ 0.37
VARS-220ENST00000461874 C1orf185Q5T7R7 199 aa17.36■□□□□ 0.37
VARS-220ENST00000461874 FNDC7Q5VTL7 733 aa17.36■□□□□ 0.37
VARS-220ENST00000461874 ACSM2BQ68CK6 577 aa17.36■□□□□ 0.37
VARS-220ENST00000461874 ZYG11AQ6WRX3 759 aa17.36■□□□□ 0.37
VARS-220ENST00000461874 PACS2Q86VP3 889 aa17.36■□□□□ 0.37
VARS-220ENST00000461874 LIX1Q8N485 282 aa17.36■□□□□ 0.37
VARS-220ENST00000461874 CCDC126Q96EE4 140 aa17.36■□□□□ 0.37
VARS-220ENST00000461874 C11orf24Q96F05 449 aaPredicted RBP17.36■□□□□ 0.37
VARS-220ENST00000461874 APIPQ96GX9 242 aa17.36■□□□□ 0.37
VARS-220ENST00000461874 LCORQ96JN0 433 aaPredicted RBP17.36■□□□□ 0.37
VARS-220ENST00000461874 KCNA7Q96RP8 456 aa17.36■□□□□ 0.37
VARS-220ENST00000461874 ITPAQ9BY32 194 aa17.36■□□□□ 0.37
VARS-220ENST00000461874 NPDC1Q9NQX5 325 aaPredicted RBP17.36■□□□□ 0.37
VARS-220ENST00000461874 ALKBH4Q9NXW9 302 aa17.36■□□□□ 0.37
VARS-220ENST00000461874 PLLPQ9Y342 182 aa17.36■□□□□ 0.37
VARS-220ENST00000461874 PCDHGB3Q9Y5G1 929 aa17.36■□□□□ 0.37
VARS-220ENST00000461874 CSMD2Q7Z408 3487 aa17.36■□□□□ 0.37
VARS-220ENST00000461874 INTS1Q8N201 2190 aaKnown RBP17.35■□□□□ 0.37
VARS-220ENST00000461874 CCDC168Q8NDH2 2452 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms