RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 SIRT5Q9NXA8 310 aa8.41□□□□□ -1.06
BRCA1-207ENST00000461798 VPS29Q9UBQ0 182 aa8.41□□□□□ -1.06
BRCA1-207ENST00000461798 ACAD8Q9UKU7 415 aa8.41□□□□□ -1.06
BRCA1-207ENST00000461798 PSME2Q9UL46 239 aa8.41□□□□□ -1.06
BRCA1-207ENST00000461798 CFL2Q9Y281 166 aa8.41□□□□□ -1.06
BRCA1-207ENST00000461798 FAM215AQ9Y5M1 114 aa8.41□□□□□ -1.06
BRCA1-207ENST00000461798 FBN2P35556 2912 aa8.4□□□□□ -1.06
BRCA1-207ENST00000461798 DNAJC13O75165 2243 aa8.4□□□□□ -1.06
BRCA1-207ENST00000461798 GOLGA6L10A6NI86 522 aa8.4□□□□□ -1.06
BRCA1-207ENST00000461798 FOXO6A8MYZ6 492 aa8.4□□□□□ -1.06
BRCA1-207ENST00000461798 FAM47E-STBD1D6RA91 191 aa8.4□□□□□ -1.06
BRCA1-207ENST00000461798 CDH16O75309 829 aa8.4□□□□□ -1.06
BRCA1-207ENST00000461798 ULK1O75385 1050 aa8.4□□□□□ -1.06
BRCA1-207ENST00000461798 SUPT7LO94864 414 aa8.4□□□□□ -1.06
BRCA1-207ENST00000461798 HPNP05981 417 aa8.4□□□□□ -1.06
BRCA1-207ENST00000461798 ABCB1P08183 1280 aaPredicted RBP8.4□□□□□ -1.06
BRCA1-207ENST00000461798 DRD2P14416 443 aa8.4□□□□□ -1.06
BRCA1-207ENST00000461798 GABRA1P14867 456 aa8.4□□□□□ -1.06
BRCA1-207ENST00000461798 TSPAN8P19075 237 aa8.4□□□□□ -1.06
BRCA1-207ENST00000461798 ENDOUP21128 410 aaKnown RBP8.4□□□□□ -1.06
BRCA1-207ENST00000461798 NT5EP21589 574 aa8.4□□□□□ -1.06
BRCA1-207ENST00000461798 GPX3P22352 226 aa8.4□□□□□ -1.06
BRCA1-207ENST00000461798 DEKP35659 375 aaKnown RBP8.4□□□□□ -1.06
BRCA1-207ENST00000461798 TMED10P49755 219 aaKnown RBP8.4□□□□□ -1.06
BRCA1-207ENST00000461798 SMCPP49901 116 aaPredicted RBP8.4□□□□□ -1.06
BRCA1-207ENST00000461798 PKNOX1P55347 436 aa8.4□□□□□ -1.06
BRCA1-207ENST00000461798 NRG3P56975 720 aa8.4□□□□□ -1.06
BRCA1-207ENST00000461798 NAA20P61599 178 aa8.4□□□□□ -1.06
BRCA1-207ENST00000461798 RPP38P78345 283 aaKnown RBP8.4□□□□□ -1.06
BRCA1-207ENST00000461798 CSTF3Q12996 717 aaKnown RBP8.4□□□□□ -1.06
BRCA1-207ENST00000461798 SLC29A2Q14542 456 aa8.4□□□□□ -1.06
BRCA1-207ENST00000461798 WLSQ5T9L3 541 aa8.4□□□□□ -1.06
BRCA1-207ENST00000461798 PRAMEF20Q5VT98 475 aa8.4□□□□□ -1.06
BRCA1-207ENST00000461798 FNDC7Q5VTL7 733 aa8.4□□□□□ -1.06
BRCA1-207ENST00000461798 TMEM198Q66K66 360 aa8.4□□□□□ -1.06
BRCA1-207ENST00000461798 ZNF585AQ6P3V2 769 aa8.4□□□□□ -1.06
BRCA1-207ENST00000461798 GALNT18Q6P9A2 607 aa8.4□□□□□ -1.06
BRCA1-207ENST00000461798 TMEM64Q6YI46 380 aa8.4□□□□□ -1.06
BRCA1-207ENST00000461798 MEX3BQ6ZN04 569 aaKnown RBP8.4□□□□□ -1.06
BRCA1-207ENST00000461798 SH2D5Q6ZV89 423 aa8.4□□□□□ -1.06
BRCA1-207ENST00000461798 GPRIN3Q6ZVF9 776 aa8.4□□□□□ -1.06
BRCA1-207ENST00000461798 NUP54Q7Z3B4 507 aa8.4□□□□□ -1.06
BRCA1-207ENST00000461798 CCDC71Q8IV32 467 aaPredicted RBP8.4□□□□□ -1.06
BRCA1-207ENST00000461798 SLC22A9Q8IVM8 553 aa8.4□□□□□ -1.06
BRCA1-207ENST00000461798 C1orf52Q8N6N3 182 aaKnown RBP8.4□□□□□ -1.06
BRCA1-207ENST00000461798 EIF1ADQ8N9N8 165 aaKnown RBP8.4□□□□□ -1.06
BRCA1-207ENST00000461798 OR5M3Q8NGP4 307 aa8.4□□□□□ -1.06
BRCA1-207ENST00000461798 NEIL3Q8TAT5 605 aa8.4□□□□□ -1.06
BRCA1-207ENST00000461798 METTL6Q8TCB7 284 aa8.4□□□□□ -1.06
BRCA1-207ENST00000461798 MZB1Q8WU39 189 aa8.4□□□□□ -1.06
BRCA1-207ENST00000461798 DIO2Q92813 273 aa8.4□□□□□ -1.06
BRCA1-207ENST00000461798 L3HYPDHQ96EM0 354 aa8.4□□□□□ -1.06
BRCA1-207ENST00000461798 HSPBAP1Q96EW2 488 aa8.4□□□□□ -1.06
BRCA1-207ENST00000461798 TMEM237Q96Q45 408 aa8.4□□□□□ -1.06
BRCA1-207ENST00000461798 DOHHQ9BU89 302 aa8.4□□□□□ -1.06
BRCA1-207ENST00000461798 FAIM2Q9BWQ8 316 aa8.4□□□□□ -1.06
BRCA1-207ENST00000461798 UCK2Q9BZX2 261 aa8.4□□□□□ -1.06
BRCA1-207ENST00000461798 EPB41L4BQ9H329 900 aa8.4□□□□□ -1.06
BRCA1-207ENST00000461798 UBQLN3Q9H347 655 aa8.4□□□□□ -1.06
BRCA1-207ENST00000461798 LDAHQ9H6V9 325 aa8.4□□□□□ -1.06
BRCA1-207ENST00000461798 MCCC2Q9HCC0 563 aa8.4□□□□□ -1.06
BRCA1-207ENST00000461798 NPDC1Q9NQX5 325 aaPredicted RBP8.4□□□□□ -1.06
BRCA1-207ENST00000461798 MAT2BQ9NZL9 334 aa8.4□□□□□ -1.06
BRCA1-207ENST00000461798 SPRR3Q9UBC9 169 aa8.4□□□□□ -1.06
BRCA1-207ENST00000461798 B4GALT7Q9UBV7 327 aa8.4□□□□□ -1.06
BRCA1-207ENST00000461798 DCDC2Q9UHG0 476 aa8.4□□□□□ -1.06
BRCA1-207ENST00000461798 MCM8Q9UJA3 840 aa8.4□□□□□ -1.06
BRCA1-207ENST00000461798 STK38LQ9Y2H1 464 aa8.4□□□□□ -1.06
BRCA1-207ENST00000461798 PDZD2O15018 2839 aa8.4□□□□□ -1.06
BRCA1-207ENST00000461798 CACNA1CQ13936 2221 aa8.39□□□□□ -1.07
BRCA1-207ENST00000461798 A0A0G2JNJ9 132 aa8.39□□□□□ -1.07
BRCA1-207ENST00000461798 AHRRA9YTQ3 701 aa8.39□□□□□ -1.07
BRCA1-207ENST00000461798 TO15178 435 aa8.39□□□□□ -1.07
BRCA1-207ENST00000461798 ACOX3O15254 700 aa8.39□□□□□ -1.07
BRCA1-207ENST00000461798 PPM1BO75688 479 aa8.39□□□□□ -1.07
BRCA1-207ENST00000461798 CBX7O95931 251 aa8.39□□□□□ -1.07
BRCA1-207ENST00000461798 FAM153BP0C7A2 387 aa8.39□□□□□ -1.07
BRCA1-207ENST00000461798 CHN1P15882 459 aa8.39□□□□□ -1.07
BRCA1-207ENST00000461798 DRD5P21918 477 aa8.39□□□□□ -1.07
BRCA1-207ENST00000461798 LORP23490 312 aaPredicted RBP8.39□□□□□ -1.07
BRCA1-207ENST00000461798 ABCD3P28288 659 aa8.39□□□□□ -1.07
BRCA1-207ENST00000461798 MSX1P28360 303 aa8.39□□□□□ -1.07
BRCA1-207ENST00000461798 FEN1P39748 380 aaKnown RBP8.39□□□□□ -1.07
BRCA1-207ENST00000461798 CASP3P42574 277 aa8.39□□□□□ -1.07
BRCA1-207ENST00000461798 PPICP45877 212 aa8.39□□□□□ -1.07
BRCA1-207ENST00000461798 ZFP36L2P47974 494 aaKnown RBP8.39□□□□□ -1.07
BRCA1-207ENST00000461798 CDK9P50750 372 aaKnown RBP8.39□□□□□ -1.07
BRCA1-207ENST00000461798 FBXW4P57775 412 aa8.39□□□□□ -1.07
BRCA1-207ENST00000461798 DCAF7P61962 342 aa8.39□□□□□ -1.07
BRCA1-207ENST00000461798 LCP2Q13094 533 aa8.39□□□□□ -1.07
BRCA1-207ENST00000461798 DUSP8Q13202 625 aa8.39□□□□□ -1.07
BRCA1-207ENST00000461798 CEBPEQ15744 281 aa8.39□□□□□ -1.07
BRCA1-207ENST00000461798 FAM153CQ494X1 144 aa8.39□□□□□ -1.07
BRCA1-207ENST00000461798 NHSL2Q5HYW2 709 aa8.39□□□□□ -1.07
BRCA1-207ENST00000461798 TEX35Q5T0J7 233 aa8.39□□□□□ -1.07
BRCA1-207ENST00000461798 C1orf185Q5T7R7 199 aa8.39□□□□□ -1.07
BRCA1-207ENST00000461798 RIPPLY2Q5TAB7 128 aa8.39□□□□□ -1.07
BRCA1-207ENST00000461798 C6orf163Q5TEZ5 329 aa8.39□□□□□ -1.07
BRCA1-207ENST00000461798 FAM111BQ6SJ93 734 aa8.39□□□□□ -1.07
BRCA1-207ENST00000461798 DMRTC2Q8IXT2 367 aaPredicted RBP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms