RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 SLC22A9Q8IVM8 553 aa2.6□□□□□ -1.99
HPS3-203ENST00000460822 OR8J1Q8NGP2 316 aa2.6□□□□□ -1.99
HPS3-203ENST00000460822 ZNF671Q8TAW3 534 aa2.6□□□□□ -1.99
HPS3-203ENST00000460822 HPSE2Q8WWQ2 592 aa2.6□□□□□ -1.99
HPS3-203ENST00000460822 P3H4Q92791 437 aa2.6□□□□□ -1.99
HPS3-203ENST00000460822 SENP5Q96HI0 755 aaPredicted RBP2.6□□□□□ -1.99
HPS3-203ENST00000460822 COG3Q96JB2 828 aa2.6□□□□□ -1.99
HPS3-203ENST00000460822 LMLNQ96KR4 655 aa2.6□□□□□ -1.99
HPS3-203ENST00000460822 LRR1Q96L50 414 aa2.6□□□□□ -1.99
HPS3-203ENST00000460822 TBC1D10AQ9BXI6 508 aa2.6□□□□□ -1.99
HPS3-203ENST00000460822 GON7Q9BXV9 100 aa2.6□□□□□ -1.99
HPS3-203ENST00000460822 NLNQ9BYT8 704 aa2.6□□□□□ -1.99
HPS3-203ENST00000460822 CXXC4Q9H2H0 198 aa2.6□□□□□ -1.99
HPS3-203ENST00000460822 TRPV5Q9NQA5 729 aa2.6□□□□□ -1.99
HPS3-203ENST00000460822 ZKSCAN7Q9P0L1 754 aaPredicted RBP2.6□□□□□ -1.99
HPS3-203ENST00000460822 MIOXQ9UGB7 285 aa2.6□□□□□ -1.99
HPS3-203ENST00000460822 BCAP29Q9UHQ4 241 aa2.6□□□□□ -1.99
HPS3-203ENST00000460822 ELF5Q9UKW6 265 aaPredicted RBP2.6□□□□□ -1.99
HPS3-203ENST00000460822 ERVK-7P63135 1459 aa2.59□□□□□ -1.99
HPS3-203ENST00000460822 PTCH1Q13635 1447 aa2.59□□□□□ -1.99
HPS3-203ENST00000460822 TUBGCP6Q96RT7 1819 aa2.59□□□□□ -1.99
HPS3-203ENST00000460822 TRPM2O94759 1503 aa2.59□□□□□ -1.99
HPS3-203ENST00000460822 SYCP2Q9BX26 1530 aa2.59□□□□□ -1.99
HPS3-203ENST00000460822 NEDD4P46934 1319 aa2.59□□□□□ -1.99
HPS3-203ENST00000460822 QRICH2Q9H0J4 1663 aa2.59□□□□□ -1.99
HPS3-203ENST00000460822 ADGRL1O94910 1474 aa2.59□□□□□ -1.99
HPS3-203ENST00000460822 MAGI1Q96QZ7 1491 aaPredicted RBP2.59□□□□□ -1.99
HPS3-203ENST00000460822 IFT140Q96RY7 1462 aa2.59□□□□□ -1.99
HPS3-203ENST00000460822 KIF1BO60333 1816 aa2.59□□□□□ -2
HPS3-203ENST00000460822 SHISA7A6NL88 538 aa2.59□□□□□ -2
HPS3-203ENST00000460822 YJEFN3A6XGL0 299 aa2.59□□□□□ -2
HPS3-203ENST00000460822 ANHXE9PGG2 379 aa2.59□□□□□ -2
HPS3-203ENST00000460822 ARPC1BO15143 372 aaKnown RBP2.59□□□□□ -2
HPS3-203ENST00000460822 MBD3O95983 291 aa2.59□□□□□ -2
HPS3-203ENST00000460822 ATP1A1P05023 1023 aaKnown RBP2.59□□□□□ -2
HPS3-203ENST00000460822 UMODP07911 640 aa2.59□□□□□ -2
HPS3-203ENST00000460822 PRKAR1AP10644 381 aa2.59□□□□□ -2
HPS3-203ENST00000460822 FGF3P11487 239 aaPredicted RBP2.59□□□□□ -2
HPS3-203ENST00000460822 AADACP22760 399 aa2.59□□□□□ -2
HPS3-203ENST00000460822 DPP4P27487 766 aa2.59□□□□□ -2
HPS3-203ENST00000460822 NPY2RP49146 381 aa2.59□□□□□ -2
HPS3-203ENST00000460822 ACTR3P61158 418 aa2.59□□□□□ -2
HPS3-203ENST00000460822 CNTN2Q02246 1040 aa2.59□□□□□ -2
HPS3-203ENST00000460822 PDK3Q15120 406 aa2.59□□□□□ -2
HPS3-203ENST00000460822 IZUMO4Q1ZYL8 232 aa2.59□□□□□ -2
HPS3-203ENST00000460822 SPANXN4Q5MJ08 99 aa2.59□□□□□ -2
HPS3-203ENST00000460822 RABGAP1LQ5R372 815 aa2.59□□□□□ -2
HPS3-203ENST00000460822 ASPHD2Q6ICH7 369 aa2.59□□□□□ -2
HPS3-203ENST00000460822 LRRC8BQ6P9F7 803 aa2.59□□□□□ -2
HPS3-203ENST00000460822 SLC25A47Q6Q0C1 308 aa2.59□□□□□ -2
HPS3-203ENST00000460822 RBMS3Q6XE24 437 aaKnown RBP2.59□□□□□ -2
HPS3-203ENST00000460822 PAQR9Q6ZVX9 377 aa2.59□□□□□ -2
HPS3-203ENST00000460822 Q71RC1 249 aaPredicted RBP2.59□□□□□ -2
HPS3-203ENST00000460822 RUFY3Q7L099 469 aa2.59□□□□□ -2
HPS3-203ENST00000460822 CACUL1Q86Y37 369 aa2.59□□□□□ -2
HPS3-203ENST00000460822 CIARTQ8N365 385 aaPredicted RBP2.59□□□□□ -2
HPS3-203ENST00000460822 NIPA2Q8N8Q9 360 aa2.59□□□□□ -2
HPS3-203ENST00000460822 MAB21L3Q8N8X9 362 aa2.59□□□□□ -2
HPS3-203ENST00000460822 AKR7LQ8NHP1 331 aa2.59□□□□□ -2
HPS3-203ENST00000460822 RLN3Q8WXF3 142 aa2.59□□□□□ -2
HPS3-203ENST00000460822 TMEM37Q8WXS4 190 aa2.59□□□□□ -2
HPS3-203ENST00000460822 OSTF1Q92882 214 aa2.59□□□□□ -2
HPS3-203ENST00000460822 CD101Q93033 1021 aa2.59□□□□□ -2
HPS3-203ENST00000460822 OMA1Q96E52 524 aa2.59□□□□□ -2
HPS3-203ENST00000460822 TPD52L3Q96J77 140 aa2.59□□□□□ -2
HPS3-203ENST00000460822 RAB40CQ96S21 281 aa2.59□□□□□ -2
HPS3-203ENST00000460822 WRAP53Q9BUR4 548 aaKnown RBP2.59□□□□□ -2
HPS3-203ENST00000460822 C6orf106Q9H6K1 298 aaPredicted RBP2.59□□□□□ -2
HPS3-203ENST00000460822 COG4Q9H9E3 785 aa2.59□□□□□ -2
HPS3-203ENST00000460822 GDF3Q9NR23 364 aa2.59□□□□□ -2
HPS3-203ENST00000460822 ZFP57Q9NU63 452 aa2.59□□□□□ -2
HPS3-203ENST00000460822 MED17Q9NVC6 651 aa2.59□□□□□ -2
HPS3-203ENST00000460822 KLHL8Q9P2G9 620 aaPredicted RBP2.59□□□□□ -2
HPS3-203ENST00000460822 P2RX2Q9UBL9 471 aa2.59□□□□□ -2
HPS3-203ENST00000460822 BAIAP2L1Q9UHR4 511 aa2.59□□□□□ -2
HPS3-203ENST00000460822 B9D1Q9UPM9 204 aa2.59□□□□□ -2
HPS3-203ENST00000460822 MRPS33Q9Y291 106 aaKnown RBP2.59□□□□□ -2
HPS3-203ENST00000460822 MAP3K4Q9Y6R4 1608 aa2.59□□□□□ -2
HPS3-203ENST00000460822 PDS5BQ9NTI5 1447 aa2.59□□□□□ -2
HPS3-203ENST00000460822 ANKRD26Q9UPS8 1709 aa2.59□□□□□ -2
HPS3-203ENST00000460822 TTC21BQ7Z4L5 1316 aa2.58□□□□□ -2
HPS3-203ENST00000460822 MED14O60244 1454 aa2.58□□□□□ -2
HPS3-203ENST00000460822 ZNF518AQ6AHZ1 1483 aa2.58□□□□□ -2
HPS3-203ENST00000460822 GSAPA4D1B5 854 aa2.58□□□□□ -2
HPS3-203ENST00000460822 E9PBE3 544 aa2.58□□□□□ -2
HPS3-203ENST00000460822 LMO7DNF2Z398 122 aa2.58□□□□□ -2
HPS3-203ENST00000460822 H0Y8G0 127 aa2.58□□□□□ -2
HPS3-203ENST00000460822 CCSO14618 274 aa2.58□□□□□ -2
HPS3-203ENST00000460822 SIGLEC5O15389 551 aa2.58□□□□□ -2
HPS3-203ENST00000460822 EDN1P05305 212 aa2.58□□□□□ -2
HPS3-203ENST00000460822 ASGR1P07306 291 aa2.58□□□□□ -2
HPS3-203ENST00000460822 CCDC159P0C7I6 412 aa2.58□□□□□ -2
HPS3-203ENST00000460822 PLA2G2AP14555 144 aa2.58□□□□□ -2
HPS3-203ENST00000460822 CASQ1P31415 396 aa2.58□□□□□ -2
HPS3-203ENST00000460822 FEN1P39748 380 aaKnown RBP2.58□□□□□ -2
HPS3-203ENST00000460822 SOX3P41225 446 aa2.58□□□□□ -2
HPS3-203ENST00000460822 ACADVLP49748 655 aa2.58□□□□□ -2
HPS3-203ENST00000460822 RGS4P49798 205 aa2.58□□□□□ -2
HPS3-203ENST00000460822 AIF1P55008 147 aa2.58□□□□□ -2
HPS3-203ENST00000460822 VCPP55072 806 aaKnown RBP2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms