RNA–Protein interactions for RNA: ENST00000460514.1

ABCA4-202, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 5

Gene ABCA4, Length 690 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-202ENST00000460514 VMP1Q96GC9 406 aa7.08□□□□□ -1.28
ABCA4-202ENST00000460514 NSL1Q96IY1 281 aa7.08□□□□□ -1.28
ABCA4-202ENST00000460514 SH3GL1Q99961 368 aa7.08□□□□□ -1.28
ABCA4-202ENST00000460514 CNPPD1Q9BV87 410 aa7.08□□□□□ -1.28
ABCA4-202ENST00000460514 RAD21L1Q9H4I0 556 aa7.08□□□□□ -1.28
ABCA4-202ENST00000460514 SLAMF7Q9NQ25 335 aa7.08□□□□□ -1.28
ABCA4-202ENST00000460514 P4HTMQ9NXG6 502 aa7.08□□□□□ -1.28
ABCA4-202ENST00000460514 MAT2BQ9NZL9 334 aa7.08□□□□□ -1.28
ABCA4-202ENST00000460514 IL17BQ9UHF5 180 aa7.08□□□□□ -1.28
ABCA4-202ENST00000460514 CORO2BQ9UQ03 480 aa7.08□□□□□ -1.28
ABCA4-202ENST00000460514 ERVK-19Q9WJR5 959 aa7.08□□□□□ -1.28
ABCA4-202ENST00000460514 POLHQ9Y253 713 aa7.08□□□□□ -1.28
ABCA4-202ENST00000460514 MAN2B2Q9Y2E5 1009 aa7.08□□□□□ -1.28
ABCA4-202ENST00000460514 CLDN16Q9Y5I7 305 aa7.08□□□□□ -1.28
ABCA4-202ENST00000460514 MRPS18BQ9Y676 258 aaKnown RBP7.08□□□□□ -1.28
ABCA4-202ENST00000460514 CCDC88CQ9P219 2028 aa7.08□□□□□ -1.28
ABCA4-202ENST00000460514 C15orf38-AP3S2A0A0A6YYH1 394 aa7.07□□□□□ -1.28
ABCA4-202ENST00000460514 RNF103-CHMP3A0A140T963 221 aa7.07□□□□□ -1.28
ABCA4-202ENST00000460514 MYOCOSA0A1B0GUC4 107 aa7.07□□□□□ -1.28
ABCA4-202ENST00000460514 EVPLLA8MZ36 301 aa7.07□□□□□ -1.28
ABCA4-202ENST00000460514 SOCS6O14544 535 aa7.07□□□□□ -1.28
ABCA4-202ENST00000460514 HNRNPCL1O60812 293 aaKnown RBP7.07□□□□□ -1.28
ABCA4-202ENST00000460514 SCN2BO60939 215 aa7.07□□□□□ -1.28
ABCA4-202ENST00000460514 ATP5HO75947 161 aa7.07□□□□□ -1.28
ABCA4-202ENST00000460514 SEC24DO94855 1032 aaPredicted RBP7.07□□□□□ -1.28
ABCA4-202ENST00000460514 COX6A1P12074 109 aa7.07□□□□□ -1.28
ABCA4-202ENST00000460514 EFNA1P20827 205 aaPredicted RBP7.07□□□□□ -1.28
ABCA4-202ENST00000460514 MC3RP41968 323 aa7.07□□□□□ -1.28
ABCA4-202ENST00000460514 RASSF2P50749 326 aa7.07□□□□□ -1.28
ABCA4-202ENST00000460514 CLCN2P51788 898 aa7.07□□□□□ -1.28
ABCA4-202ENST00000460514 SLC26A5P58743 744 aa7.07□□□□□ -1.28
ABCA4-202ENST00000460514 PSPHP78330 225 aa7.07□□□□□ -1.28
ABCA4-202ENST00000460514 PHC1P78364 1004 aa7.07□□□□□ -1.28
ABCA4-202ENST00000460514 MXRA7P84157 204 aa7.07□□□□□ -1.28
ABCA4-202ENST00000460514 FUT7Q11130 342 aa7.07□□□□□ -1.28
ABCA4-202ENST00000460514 CDC20Q12834 499 aa7.07□□□□□ -1.28
ABCA4-202ENST00000460514 AIMP2Q13155 320 aaKnown RBP7.07□□□□□ -1.28
ABCA4-202ENST00000460514 IL10RAQ13651 578 aa7.07□□□□□ -1.28
ABCA4-202ENST00000460514 PCOLCEQ15113 449 aa7.07□□□□□ -1.28
ABCA4-202ENST00000460514 TLR1Q15399 786 aa7.07□□□□□ -1.28
ABCA4-202ENST00000460514 ZNHIT3Q15649 155 aaPredicted RBP7.07□□□□□ -1.28
ABCA4-202ENST00000460514 LTB4RQ15722 352 aa7.07□□□□□ -1.28
ABCA4-202ENST00000460514 PRSS53Q2L4Q9 553 aa7.07□□□□□ -1.28
ABCA4-202ENST00000460514 BTBD16Q32M84 506 aa7.07□□□□□ -1.28
ABCA4-202ENST00000460514 TRMT5Q32P41 509 aaKnown RBP7.07□□□□□ -1.28
ABCA4-202ENST00000460514 ZNF628Q5EBL2 1059 aa7.07□□□□□ -1.28
ABCA4-202ENST00000460514 LRIF1Q5T3J3 769 aa7.07□□□□□ -1.28
ABCA4-202ENST00000460514 HLA-DQA1Q5Y7H0 255 aa7.07□□□□□ -1.28
ABCA4-202ENST00000460514 REP15Q6BDI9 236 aa7.07□□□□□ -1.28
ABCA4-202ENST00000460514 PLAG1Q6DJT9 500 aa7.07□□□□□ -1.28
ABCA4-202ENST00000460514 JMJD6Q6NYC1 403 aaPredicted RBP7.07□□□□□ -1.28
ABCA4-202ENST00000460514 ZCCHC12Q6PEW1 402 aa7.07□□□□□ -1.28
ABCA4-202ENST00000460514 SLC2A7Q6PXP3 512 aa7.07□□□□□ -1.28
ABCA4-202ENST00000460514 TMEM107Q6UX40 140 aa7.07□□□□□ -1.28
ABCA4-202ENST00000460514 HSDL2Q6YN16 418 aa7.07□□□□□ -1.28
ABCA4-202ENST00000460514 CCDC81Q6ZN84 652 aa7.07□□□□□ -1.28
ABCA4-202ENST00000460514 SLC29A4Q7RTT9 530 aa7.07□□□□□ -1.28
ABCA4-202ENST00000460514 ARPINQ7Z6K5 226 aa7.07□□□□□ -1.28
ABCA4-202ENST00000460514 DHDDSQ86SQ9 333 aa7.07□□□□□ -1.28
ABCA4-202ENST00000460514 TREML1Q86YW5 311 aa7.07□□□□□ -1.28
ABCA4-202ENST00000460514 SPACA3Q8IXA5 215 aa7.07□□□□□ -1.28
ABCA4-202ENST00000460514 KBTBD2Q8IY47 623 aa7.07□□□□□ -1.28
ABCA4-202ENST00000460514 CLECL1Q8IZS7 167 aa7.07□□□□□ -1.28
ABCA4-202ENST00000460514 SHISA5Q8N114 240 aa7.07□□□□□ -1.28
ABCA4-202ENST00000460514 OR2L13Q8N349 312 aa7.07□□□□□ -1.28
ABCA4-202ENST00000460514 POU5F2Q8N7G0 328 aa7.07□□□□□ -1.28
ABCA4-202ENST00000460514 TMEM102Q8N9M5 508 aaPredicted RBP7.07□□□□□ -1.28
ABCA4-202ENST00000460514 CLEC1AQ8NC01 280 aa7.07□□□□□ -1.28
ABCA4-202ENST00000460514 NUP43Q8NFH3 380 aa7.07□□□□□ -1.28
ABCA4-202ENST00000460514 ADCY4Q8NFM4 1077 aa7.07□□□□□ -1.28
ABCA4-202ENST00000460514 OR5L2Q8NGL0 311 aa7.07□□□□□ -1.28
ABCA4-202ENST00000460514 OR1N1Q8NGS0 311 aa7.07□□□□□ -1.28
ABCA4-202ENST00000460514 OR8K3Q8NH51 312 aa7.07□□□□□ -1.28
ABCA4-202ENST00000460514 SLC2A12Q8TD20 617 aa7.07□□□□□ -1.28
ABCA4-202ENST00000460514 ADAMTS17Q8TE56 1095 aa7.07□□□□□ -1.28
ABCA4-202ENST00000460514 PTPMT1Q8WUK0 201 aaPredicted RBP7.07□□□□□ -1.28
ABCA4-202ENST00000460514 ZCCHC14Q8WYQ9 949 aaKnown RBP7.07□□□□□ -1.28
ABCA4-202ENST00000460514 GTF2H4Q92759 462 aa7.07□□□□□ -1.28
ABCA4-202ENST00000460514 KAT2AQ92830 837 aa7.07□□□□□ -1.28
ABCA4-202ENST00000460514 C8orf44Q96CB5 159 aa7.07□□□□□ -1.28
ABCA4-202ENST00000460514 CTHRC1Q96CG8 243 aa7.07□□□□□ -1.28
ABCA4-202ENST00000460514 SENP5Q96HI0 755 aaPredicted RBP7.07□□□□□ -1.28
ABCA4-202ENST00000460514 MS4A4EQ96PG1 132 aa7.07□□□□□ -1.28
ABCA4-202ENST00000460514 SLC35A5Q9BS91 424 aa7.07□□□□□ -1.28
ABCA4-202ENST00000460514 KRTAP4-7Q9BYR0 210 aa7.07□□□□□ -1.28
ABCA4-202ENST00000460514 OR8D2Q9GZM6 311 aa7.07□□□□□ -1.28
ABCA4-202ENST00000460514 MMP25Q9NPA2 562 aa7.07□□□□□ -1.28
ABCA4-202ENST00000460514 ZCCHC3Q9NUD5 404 aaKnown RBP7.07□□□□□ -1.28
ABCA4-202ENST00000460514 NTMQ9P121 344 aa7.07□□□□□ -1.28
ABCA4-202ENST00000460514 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.07□□□□□ -1.28
ABCA4-202ENST00000460514 BCAP29Q9UHQ4 241 aa7.07□□□□□ -1.28
ABCA4-202ENST00000460514 FBXL4Q9UKA2 621 aa7.07□□□□□ -1.28
ABCA4-202ENST00000460514 FAF1Q9UNN5 650 aaPredicted RBP7.07□□□□□ -1.28
ABCA4-202ENST00000460514 PPIEQ9UNP9 301 aaKnown RBP7.07□□□□□ -1.28
ABCA4-202ENST00000460514 C19orf53Q9UNZ5 99 aaPredicted RBP7.07□□□□□ -1.28
ABCA4-202ENST00000460514 AP3M1Q9Y2T2 418 aa7.07□□□□□ -1.28
ABCA4-202ENST00000460514 IGHV3-20A0A0C4DH32 117 aa7.06□□□□□ -1.28
ABCA4-202ENST00000460514 A0A1W2PS29 197 aa7.06□□□□□ -1.28
ABCA4-202ENST00000460514 TMEM247A6NEH6 219 aa7.06□□□□□ -1.28
ABCA4-202ENST00000460514 DUXAA6NLW8 204 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms