RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 ZNF630Q2M218 657 aaPredicted RBP14.59□□□□□ -0.07
LMNB1-203ENST00000460265 HORMAD2Q8N7B1 307 aa14.59□□□□□ -0.07
LMNB1-203ENST00000460265 WDR36Q8NI36 951 aaKnown RBP14.59□□□□□ -0.07
LMNB1-203ENST00000460265 SLC7A6Q92536 515 aa14.59□□□□□ -0.07
LMNB1-203ENST00000460265 MYDGFQ969H8 173 aa14.59□□□□□ -0.07
LMNB1-203ENST00000460265 SLC38A4Q969I6 547 aa14.59□□□□□ -0.07
LMNB1-203ENST00000460265 SFXN1Q9H9B4 322 aa14.59□□□□□ -0.07
LMNB1-203ENST00000460265 GPR34Q9UPC5 381 aa14.59□□□□□ -0.07
LMNB1-203ENST00000460265 ANHXE9PGG2 379 aa14.59□□□□□ -0.07
LMNB1-203ENST00000460265 LCMT2O60294 686 aaKnown RBP14.59□□□□□ -0.07
LMNB1-203ENST00000460265 ERP29P30040 261 aaKnown RBP14.59□□□□□ -0.07
LMNB1-203ENST00000460265 UBE3AQ05086 875 aa14.59□□□□□ -0.07
LMNB1-203ENST00000460265 GBX1Q14549 363 aa14.59□□□□□ -0.07
LMNB1-203ENST00000460265 MAD2L1BPQ15013 274 aaPredicted RBP14.59□□□□□ -0.07
LMNB1-203ENST00000460265 NDUFAF5Q5TEU4 345 aa14.59□□□□□ -0.07
LMNB1-203ENST00000460265 MSANTD1Q6ZTZ1 278 aa14.59□□□□□ -0.07
LMNB1-203ENST00000460265 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.59□□□□□ -0.072e-10■■□□□ 13
LMNB1-203ENST00000460265 SETD7Q8WTS6 366 aaKnown RBP14.59□□□□□ -0.07
LMNB1-203ENST00000460265 KAT2AQ92830 837 aa14.59□□□□□ -0.07
LMNB1-203ENST00000460265 SLC35G5Q96KT7 338 aa14.59□□□□□ -0.07
LMNB1-203ENST00000460265 Q96MT0 163 aa14.59□□□□□ -0.07
LMNB1-203ENST00000460265 MS4A12Q9NXJ0 267 aa14.59□□□□□ -0.07
LMNB1-203ENST00000460265 GLTPQ9NZD2 209 aa14.59□□□□□ -0.07
LMNB1-203ENST00000460265 DNAJC27Q9NZQ0 273 aa14.59□□□□□ -0.07
LMNB1-203ENST00000460265 RNF6Q9Y252 685 aa14.59□□□□□ -0.07
LMNB1-203ENST00000460265 WDR87Q6ZQQ6 2873 aa14.59□□□□□ -0.07
LMNB1-203ENST00000460265 TRIOBPQ9H2D6 2365 aa14.59□□□□□ -0.07
LMNB1-203ENST00000460265 FRS3O43559 492 aa14.58□□□□□ -0.07
LMNB1-203ENST00000460265 SOD1P00441 154 aa14.58□□□□□ -0.07
LMNB1-203ENST00000460265 HOXB2P14652 356 aa14.58□□□□□ -0.07
LMNB1-203ENST00000460265 CD72P21854 359 aa14.58□□□□□ -0.07
LMNB1-203ENST00000460265 BTN3A2P78410 334 aa14.58□□□□□ -0.07
LMNB1-203ENST00000460265 MLLT1Q03111 559 aaPredicted RBP14.58□□□□□ -0.07
LMNB1-203ENST00000460265 ST3GAL4Q11206 333 aa14.58□□□□□ -0.07
LMNB1-203ENST00000460265 SYPL1Q16563 259 aa14.58□□□□□ -0.07
LMNB1-203ENST00000460265 TIGD6Q17RP2 521 aa14.58□□□□□ -0.07
LMNB1-203ENST00000460265 ITPRIPL2Q3MIP1 535 aa14.58□□□□□ -0.07
LMNB1-203ENST00000460265 PARM1Q6UWI2 310 aa14.58□□□□□ -0.07
LMNB1-203ENST00000460265 TSPYL5Q86VY4 417 aaPredicted RBP14.58□□□□□ -0.07
LMNB1-203ENST00000460265 RBM45Q8IUH3 476 aaKnown RBP14.58□□□□□ -0.07
LMNB1-203ENST00000460265 AMER3Q8N944 861 aa14.58□□□□□ -0.07
LMNB1-203ENST00000460265 KBTBD8Q8NFY9 601 aa14.58□□□□□ -0.07
LMNB1-203ENST00000460265 SIPA1Q96FS4 1042 aa14.58□□□□□ -0.07
LMNB1-203ENST00000460265 C19orf43Q9BQ61 176 aa14.58□□□□□ -0.07
LMNB1-203ENST00000460265 SLC17A9Q9BYT1 436 aa14.58□□□□□ -0.07
LMNB1-203ENST00000460265 QRSL1Q9H0R6 528 aaKnown RBP14.58□□□□□ -0.07
LMNB1-203ENST00000460265 TMEM184CQ9NVA4 438 aa14.58□□□□□ -0.07
LMNB1-203ENST00000460265 ZNF224Q9NZL3 707 aa14.58□□□□□ -0.07
LMNB1-203ENST00000460265 TAAR2Q9P1P5 351 aa14.58□□□□□ -0.07
LMNB1-203ENST00000460265 SLC27A6Q9Y2P4 619 aa14.58□□□□□ -0.07
LMNB1-203ENST00000460265 LYVE1Q9Y5Y7 322 aa14.58□□□□□ -0.07
LMNB1-203ENST00000460265 PCGF2P35227 344 aa14.58□□□□□ -0.08
LMNB1-203ENST00000460265 SLC16A1P53985 500 aa14.58□□□□□ -0.08
LMNB1-203ENST00000460265 KCNJ10P78508 379 aa14.58□□□□□ -0.08
LMNB1-203ENST00000460265 FAPQ12884 760 aa14.58□□□□□ -0.08
LMNB1-203ENST00000460265 GPR50Q13585 617 aa14.58□□□□□ -0.08
LMNB1-203ENST00000460265 SOWAHCQ53LP3 525 aaPredicted RBP14.58□□□□□ -0.08
LMNB1-203ENST00000460265 C16orf62Q7Z3J2 963 aa14.58□□□□□ -0.08
LMNB1-203ENST00000460265 SYNPOQ8N3V7 929 aa14.58□□□□□ -0.08
LMNB1-203ENST00000460265 PRR14Q9BWN1 585 aa14.58□□□□□ -0.08
LMNB1-203ENST00000460265 CDADC1Q9BWV3 514 aa14.58□□□□□ -0.08
LMNB1-203ENST00000460265 ITPAQ9BY32 194 aa14.58□□□□□ -0.08
LMNB1-203ENST00000460265 PBX4Q9BYU1 374 aa14.58□□□□□ -0.08
LMNB1-203ENST00000460265 POLR2J3Q9H1A7 115 aaKnown RBP14.58□□□□□ -0.08
LMNB1-203ENST00000460265 RNF167Q9H6Y7 350 aa14.58□□□□□ -0.08
LMNB1-203ENST00000460265 TAS2R16Q9NYV7 291 aa14.58□□□□□ -0.08
LMNB1-203ENST00000460265 PCDHGB1Q9Y5G3 927 aa14.58□□□□□ -0.08
LMNB1-203ENST00000460265 M0R3H8 397 aa14.58□□□□□ -0.08
LMNB1-203ENST00000460265 UGT2B17O75795 530 aa14.58□□□□□ -0.08
LMNB1-203ENST00000460265 CSF2P04141 144 aa14.58□□□□□ -0.08
LMNB1-203ENST00000460265 UQCRC2P22695 453 aa14.58□□□□□ -0.08
LMNB1-203ENST00000460265 HOXA9P31269 272 aa14.58□□□□□ -0.08
LMNB1-203ENST00000460265 GZMMP51124 257 aa14.58□□□□□ -0.08
LMNB1-203ENST00000460265 ITGA1P56199 1179 aa14.58□□□□□ -0.08
LMNB1-203ENST00000460265 SNTA1Q13424 505 aa14.58□□□□□ -0.08
LMNB1-203ENST00000460265 DGLUCYQ7Z3D6 616 aa14.58□□□□□ -0.08
LMNB1-203ENST00000460265 HERVK_113Q902F9 699 aa14.58□□□□□ -0.08
LMNB1-203ENST00000460265 DNASE1L2Q92874 299 aa14.58□□□□□ -0.08
LMNB1-203ENST00000460265 METTL2AQ96IZ6 378 aaKnown RBP14.58□□□□□ -0.08
LMNB1-203ENST00000460265 CAMK1GQ96NX5 476 aa14.58□□□□□ -0.08
LMNB1-203ENST00000460265 TM9SF2Q99805 663 aa14.58□□□□□ -0.08
LMNB1-203ENST00000460265 C1QTNF7Q9BXJ2 289 aa14.58□□□□□ -0.08
LMNB1-203ENST00000460265 CCNB1IP1Q9NPC3 277 aa14.58□□□□□ -0.08
LMNB1-203ENST00000460265 CLN6Q9NWW5 311 aa14.58□□□□□ -0.08
LMNB1-203ENST00000460265 WBP1LQ9NX94 342 aa14.58□□□□□ -0.08
LMNB1-203ENST00000460265 NCKAP1Q9Y2A7 1128 aa14.58□□□□□ -0.08
LMNB1-203ENST00000460265 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.57□□□□□ -0.08
LMNB1-203ENST00000460265 AVPR1BP47901 424 aa14.57□□□□□ -0.08
LMNB1-203ENST00000460265 CLEC12AQ5QGZ9 265 aa14.57□□□□□ -0.08
LMNB1-203ENST00000460265 KDM4DQ6B0I6 523 aa14.57□□□□□ -0.08
LMNB1-203ENST00000460265 FRMD1Q8N878 549 aa14.57□□□□□ -0.08
LMNB1-203ENST00000460265 PLA2G2FQ9BZM2 168 aa14.57□□□□□ -0.08
LMNB1-203ENST00000460265 OR52A5Q9H2C5 316 aa14.57□□□□□ -0.08
LMNB1-203ENST00000460265 NKX2-4Q9H2Z4 354 aa14.57□□□□□ -0.08
LMNB1-203ENST00000460265 ATP6V1HQ9UI12 483 aa14.57□□□□□ -0.08
LMNB1-203ENST00000460265 NAALAD2Q9Y3Q0 740 aa14.57□□□□□ -0.08
LMNB1-203ENST00000460265 CLDN24A6NM45 220 aa14.57□□□□□ -0.08
LMNB1-203ENST00000460265 LEUTXA8MZ59 168 aa14.57□□□□□ -0.08
LMNB1-203ENST00000460265 H0Y8X5 98 aa14.57□□□□□ -0.08
LMNB1-203ENST00000460265 LINC01565O15544 149 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms