RNA–Protein interactions for RNA: ENST00000460035.1

CCDC12-204, Transcript of coiled-coil domain containing 12, humanhuman

TSL 2

Gene CCDC12, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-204ENST00000460035 SOX18P35713 384 aa10.07□□□□□ -0.8
CCDC12-204ENST00000460035 CASRP41180 1078 aa10.07□□□□□ -0.8
CCDC12-204ENST00000460035 MC3RP41968 323 aa10.07□□□□□ -0.8
CCDC12-204ENST00000460035 FRKP42685 505 aaPredicted RBP10.07□□□□□ -0.8
CCDC12-204ENST00000460035 CD97P48960 835 aa10.07□□□□□ -0.8
CCDC12-204ENST00000460035 CLNS1AP54105 237 aaKnown RBP10.07□□□□□ -0.8
CCDC12-204ENST00000460035 SRSF11Q05519 484 aaKnown RBP10.07□□□□□ -0.8
CCDC12-204ENST00000460035 KLRB1Q12918 225 aa10.07□□□□□ -0.8
CCDC12-204ENST00000460035 MPEG1Q2M385 716 aa10.07□□□□□ -0.8
CCDC12-204ENST00000460035 NADK2Q4G0N4 442 aa10.07□□□□□ -0.8
CCDC12-204ENST00000460035 OR4F3Q6IEY1 312 aa10.07□□□□□ -0.8
CCDC12-204ENST00000460035 TMEM107Q6UX40 140 aa10.07□□□□□ -0.8
CCDC12-204ENST00000460035 CAMKMTQ7Z624 323 aa10.07□□□□□ -0.8
CCDC12-204ENST00000460035 C9orf40Q8IXQ3 194 aa10.07□□□□□ -0.8
CCDC12-204ENST00000460035 NATD1Q8N6N6 113 aa10.07□□□□□ -0.8
CCDC12-204ENST00000460035 RBMXL3Q8N7X1 1067 aaKnown RBP10.07□□□□□ -0.8
CCDC12-204ENST00000460035 ZNF615Q8N8J6 731 aa10.07□□□□□ -0.8
CCDC12-204ENST00000460035 SIMC1Q8NDZ2 872 aa10.07□□□□□ -0.8
CCDC12-204ENST00000460035 OR7G2Q8NG99 324 aa10.07□□□□□ -0.8
CCDC12-204ENST00000460035 HAS2Q92819 552 aa10.07□□□□□ -0.8
CCDC12-204ENST00000460035 UTP23Q9BRU9 249 aaKnown RBP10.07□□□□□ -0.8
CCDC12-204ENST00000460035 RNF32Q9H0A6 362 aa10.07□□□□□ -0.8
CCDC12-204ENST00000460035 SLAMF7Q9NQ25 335 aa10.07□□□□□ -0.8
CCDC12-204ENST00000460035 ACSS1Q9NUB1 689 aaPredicted RBP10.07□□□□□ -0.8
CCDC12-204ENST00000460035 RYDENQ9NUL5 291 aaKnown RBP10.07□□□□□ -0.8
CCDC12-204ENST00000460035 PRODH2Q9UF12 536 aa10.07□□□□□ -0.8
CCDC12-204ENST00000460035 ZNF639Q9UID6 485 aa10.07□□□□□ -0.8
CCDC12-204ENST00000460035 CFL2Q9Y281 166 aa10.07□□□□□ -0.8
CCDC12-204ENST00000460035 YARS2Q9Y2Z4 477 aaKnown RBP10.07□□□□□ -0.8
CCDC12-204ENST00000460035 GPR45Q9Y5Y3 372 aa10.07□□□□□ -0.8
CCDC12-204ENST00000460035 ZNF407Q9C0G0 2248 aa10.07□□□□□ -0.8
CCDC12-204ENST00000460035 TMEM200CA6NKL6 621 aa10.06□□□□□ -0.8
CCDC12-204ENST00000460035 C9JVG2 144 aa10.06□□□□□ -0.8
CCDC12-204ENST00000460035 PLOD3O60568 738 aa10.06□□□□□ -0.8
CCDC12-204ENST00000460035 PRAMEF2O60811 474 aa10.06□□□□□ -0.8
CCDC12-204ENST00000460035 SLC22A3O75751 556 aa10.06□□□□□ -0.8
CCDC12-204ENST00000460035 CPSF4O95639 269 aaKnown RBP10.06□□□□□ -0.8
CCDC12-204ENST00000460035 C6orf47O95873 294 aa10.06□□□□□ -0.8
CCDC12-204ENST00000460035 CBX7O95931 251 aa10.06□□□□□ -0.8
CCDC12-204ENST00000460035 PRB1P04280 392 aa10.06□□□□□ -0.8
CCDC12-204ENST00000460035 NCF2P19878 526 aaPredicted RBP10.06□□□□□ -0.8
CCDC12-204ENST00000460035 CD96P40200 585 aa10.06□□□□□ -0.8
CCDC12-204ENST00000460035 KIR3DL1P43629 444 aa10.06□□□□□ -0.8
CCDC12-204ENST00000460035 CYB561P49447 251 aa10.06□□□□□ -0.8
CCDC12-204ENST00000460035 SSR4P51571 173 aa10.06□□□□□ -0.8
CCDC12-204ENST00000460035 NR0B1P51843 470 aaKnown RBP10.06□□□□□ -0.8
CCDC12-204ENST00000460035 ARFIP2P53365 341 aa10.06□□□□□ -0.8
CCDC12-204ENST00000460035 PRKAG1P54619 331 aa10.06□□□□□ -0.8
CCDC12-204ENST00000460035 STX1BP61266 288 aa10.06□□□□□ -0.8
CCDC12-204ENST00000460035 TUBA3CQ13748 450 aa10.06□□□□□ -0.8
CCDC12-204ENST00000460035 GSTA3Q16772 222 aa10.06□□□□□ -0.8
CCDC12-204ENST00000460035 PDCD4Q53EL6 469 aaKnown RBP10.06□□□□□ -0.8
CCDC12-204ENST00000460035 ANXA8L1Q5VT79 327 aa10.06□□□□□ -0.8
CCDC12-204ENST00000460035 TUBA3EQ6PEY2 450 aa10.06□□□□□ -0.8
CCDC12-204ENST00000460035 SZRD1Q7Z422 152 aa10.06□□□□□ -0.8
CCDC12-204ENST00000460035 MIER2Q8N344 545 aa10.06□□□□□ -0.8
CCDC12-204ENST00000460035 VPS37AQ8NEZ2 397 aa10.06□□□□□ -0.8
CCDC12-204ENST00000460035 C16orf52Q8NHV5 167 aa10.06□□□□□ -0.8
CCDC12-204ENST00000460035 NUBPLQ8TB37 319 aa10.06□□□□□ -0.8
CCDC12-204ENST00000460035 ASB15Q8WXK1 588 aa10.06□□□□□ -0.8
CCDC12-204ENST00000460035 OR5P2Q8WZ92 322 aa10.06□□□□□ -0.8
CCDC12-204ENST00000460035 TESCQ96BS2 214 aa10.06□□□□□ -0.8
CCDC12-204ENST00000460035 ELP4Q96EB1 424 aa10.06□□□□□ -0.8
CCDC12-204ENST00000460035 TEX37Q96LM6 180 aa10.06□□□□□ -0.8
CCDC12-204ENST00000460035 BHLHE41Q9C0J9 482 aaPredicted RBP10.06□□□□□ -0.8
CCDC12-204ENST00000460035 WWTR1Q9GZV5 400 aa10.06□□□□□ -0.8
CCDC12-204ENST00000460035 DDX18Q9NVP1 670 aaKnown RBP10.06□□□□□ -0.8
CCDC12-204ENST00000460035 TAS2R9Q9NYW1 312 aa10.06□□□□□ -0.8
CCDC12-204ENST00000460035 LUZP4Q9P127 313 aa10.06□□□□□ -0.8
CCDC12-204ENST00000460035 PCDHGB4Q9UN71 923 aa10.06□□□□□ -0.8
CCDC12-204ENST00000460035 ERVK-11Q9UQG0 969 aa10.06□□□□□ -0.8
CCDC12-204ENST00000460035 CSAG2Q9Y5P2 127 aa10.06□□□□□ -0.8
CCDC12-204ENST00000460035 SNX8Q9Y5X2 465 aa10.06□□□□□ -0.8
CCDC12-204ENST00000460035 NCKAP5O14513 1909 aa10.05□□□□□ -0.8
CCDC12-204ENST00000460035 PRRC2CQ9Y520 2896 aaKnown RBP10.05□□□□□ -0.8
CCDC12-204ENST00000460035 CFAP46Q8IYW2 2715 aa10.05□□□□□ -0.8
CCDC12-204ENST00000460035 A0A087WV62 115 aa10.05□□□□□ -0.8
CCDC12-204ENST00000460035 OR5H15A6NDH6 313 aa10.05□□□□□ -0.8
CCDC12-204ENST00000460035 A8MVJ9 347 aa10.05□□□□□ -0.8
CCDC12-204ENST00000460035 PLOD2O00469 737 aa10.05□□□□□ -0.8
CCDC12-204ENST00000460035 COQ9O75208 318 aa10.05□□□□□ -0.8
CCDC12-204ENST00000460035 NME6O75414 186 aaPredicted RBP10.05□□□□□ -0.8
CCDC12-204ENST00000460035 IL12AP29459 219 aa10.05□□□□□ -0.8
CCDC12-204ENST00000460035 MRPL19P49406 292 aaKnown RBP10.05□□□□□ -0.8
CCDC12-204ENST00000460035 EMDP50402 254 aa10.05□□□□□ -0.8
CCDC12-204ENST00000460035 TNFSF10P50591 281 aa10.05□□□□□ -0.8
CCDC12-204ENST00000460035 HLCSP50747 726 aa10.05□□□□□ -0.8
CCDC12-204ENST00000460035 CDK9P50750 372 aaKnown RBP10.05□□□□□ -0.8
CCDC12-204ENST00000460035 DGKQP52824 942 aa10.05□□□□□ -0.8
CCDC12-204ENST00000460035 GNGT1P63211 74 aa10.05□□□□□ -0.8
CCDC12-204ENST00000460035 IRX1P78414 480 aaPredicted RBP10.05□□□□□ -0.8
CCDC12-204ENST00000460035 DUSP8Q13202 625 aa10.05□□□□□ -0.8
CCDC12-204ENST00000460035 MLC1Q15049 377 aa10.05□□□□□ -0.8
CCDC12-204ENST00000460035 EBPQ15125 230 aaKnown RBP10.05□□□□□ -0.8
CCDC12-204ENST00000460035 TLR1Q15399 786 aa10.05□□□□□ -0.8
CCDC12-204ENST00000460035 OR1C1Q15619 314 aa10.05□□□□□ -0.8
CCDC12-204ENST00000460035 DPY19L1Q2PZI1 675 aa10.05□□□□□ -0.8
CCDC12-204ENST00000460035 FAM174BQ3ZCQ3 159 aa10.05□□□□□ -0.8
CCDC12-204ENST00000460035 PLEKHN1Q494U1 663 aaPredicted RBP10.05□□□□□ -0.8
CCDC12-204ENST00000460035 SPDYE7PQ495Y7 208 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms