RNA–Protein interactions for RNA: ENST00000458591.6

SCFD1-203, Transcript of sec1 family domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD1, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-203ENST00000458591 A0A0B4J293 547 aa13.35□□□□□ -0.27
SCFD1-203ENST00000458591 DVL2O14641 736 aa13.35□□□□□ -0.27
SCFD1-203ENST00000458591 HOXC11O43248 304 aaPredicted RBP13.35□□□□□ -0.27
SCFD1-203ENST00000458591 ERAL1O75616 437 aaKnown RBP13.35□□□□□ -0.27
SCFD1-203ENST00000458591 LALBAP00709 142 aa13.35□□□□□ -0.27
SCFD1-203ENST00000458591 CEBPBP17676 345 aa13.35□□□□□ -0.27
SCFD1-203ENST00000458591 ENDOUP21128 410 aaKnown RBP13.35□□□□□ -0.27
SCFD1-203ENST00000458591 GPC1P35052 558 aa13.35□□□□□ -0.27
SCFD1-203ENST00000458591 DDOSTP39656 456 aa13.35□□□□□ -0.27
SCFD1-203ENST00000458591 MNX1P50219 401 aaPredicted RBP13.35□□□□□ -0.27
SCFD1-203ENST00000458591 SNAPC1Q16533 368 aa13.35□□□□□ -0.27
SCFD1-203ENST00000458591 CLPPQ16740 277 aaPredicted RBP13.35□□□□□ -0.27
SCFD1-203ENST00000458591 C9orf64Q5T6V5 341 aa13.35□□□□□ -0.27
SCFD1-203ENST00000458591 MEDAGQ5VYS4 303 aa13.35□□□□□ -0.27
SCFD1-203ENST00000458591 ZNF793Q6ZN11 406 aa13.35□□□□□ -0.27
SCFD1-203ENST00000458591 LHFPL3Q86UP9 236 aa13.35□□□□□ -0.27
SCFD1-203ENST00000458591 TBC1D19Q8N5T2 526 aa13.35□□□□□ -0.27
SCFD1-203ENST00000458591 LINC01555Q8NAE3 123 aa13.35□□□□□ -0.27
SCFD1-203ENST00000458591 PROKR2Q8NFJ6 384 aa13.35□□□□□ -0.27
SCFD1-203ENST00000458591 NLGN4YQ8NFZ3 816 aaPredicted RBP13.35□□□□□ -0.27
SCFD1-203ENST00000458591 OR8D4Q8NGM9 314 aa13.35□□□□□ -0.27
SCFD1-203ENST00000458591 CREB3L4Q8TEY5 395 aa13.35□□□□□ -0.27
SCFD1-203ENST00000458591 RAD51AP1Q96B01 352 aa13.35□□□□□ -0.27
SCFD1-203ENST00000458591 RNF31Q96EP0 1072 aa13.35□□□□□ -0.27
SCFD1-203ENST00000458591 DIRAS2Q96HU8 199 aa13.35□□□□□ -0.27
SCFD1-203ENST00000458591 DEPDC7Q96QD5 511 aa13.35□□□□□ -0.27
SCFD1-203ENST00000458591 DPH7Q9BTV6 452 aa13.35□□□□□ -0.27
SCFD1-203ENST00000458591 FNDC11Q9BVV2 318 aa13.35□□□□□ -0.27
SCFD1-203ENST00000458591 EPHX3Q9H6B9 360 aa13.35□□□□□ -0.27
SCFD1-203ENST00000458591 ZCCHC3Q9NUD5 404 aaKnown RBP13.35□□□□□ -0.27
SCFD1-203ENST00000458591 NDOR1Q9UHB4 597 aa13.35□□□□□ -0.27
SCFD1-203ENST00000458591 TBX21Q9UL17 535 aa13.35□□□□□ -0.27
SCFD1-203ENST00000458591 LRRK1Q38SD2 2015 aa13.34□□□□□ -0.27
SCFD1-203ENST00000458591 A0A1W2PPV9 198 aa13.34□□□□□ -0.27
SCFD1-203ENST00000458591 PGRMC2O15173 223 aa13.34□□□□□ -0.27
SCFD1-203ENST00000458591 PCCBP05166 539 aa13.34□□□□□ -0.27
SCFD1-203ENST00000458591 EPCAMP16422 314 aa13.34□□□□□ -0.27
SCFD1-203ENST00000458591 ST8SIA6P61647 398 aa13.34□□□□□ -0.27
SCFD1-203ENST00000458591 RUNX1T1Q06455 604 aa13.34□□□□□ -0.27
SCFD1-203ENST00000458591 DMPKQ09013 629 aa13.34□□□□□ -0.27
SCFD1-203ENST00000458591 MLLT11Q13015 90 aaPredicted RBP13.34□□□□□ -0.27
SCFD1-203ENST00000458591 LASP1Q14847 261 aaKnown RBP13.34□□□□□ -0.27
SCFD1-203ENST00000458591 GLYR1Q49A26 553 aaPredicted RBP13.34□□□□□ -0.27
SCFD1-203ENST00000458591 FNDC3BQ53EP0 1204 aaKnown RBP13.34□□□□□ -0.27
SCFD1-203ENST00000458591 B3GLCTQ6Y288 498 aa13.34□□□□□ -0.27
SCFD1-203ENST00000458591 PRICKLE2Q7Z3G6 844 aa13.34□□□□□ -0.27
SCFD1-203ENST00000458591 GALNT6Q8NCL4 622 aa13.34□□□□□ -0.27
SCFD1-203ENST00000458591 SETD7Q8WTS6 366 aaKnown RBP13.34□□□□□ -0.27
SCFD1-203ENST00000458591 FGF11Q92914 225 aa13.34□□□□□ -0.27
SCFD1-203ENST00000458591 SLC25A46Q96AG3 418 aa13.34□□□□□ -0.27
SCFD1-203ENST00000458591 PHOX2BQ99453 314 aa13.34□□□□□ -0.27
SCFD1-203ENST00000458591 RANGRFQ9HD47 186 aaPredicted RBP13.34□□□□□ -0.27
SCFD1-203ENST00000458591 TESQ9UGI8 421 aaKnown RBP13.34□□□□□ -0.27
SCFD1-203ENST00000458591 ACAD8Q9UKU7 415 aa13.34□□□□□ -0.27
SCFD1-203ENST00000458591 MTCL1Q9Y4B5 1905 aaKnown RBP13.34□□□□□ -0.27
SCFD1-203ENST00000458591 FABP12A6NFH5 140 aa13.34□□□□□ -0.27
SCFD1-203ENST00000458591 KIAA0355O15063 1070 aa13.34□□□□□ -0.27
SCFD1-203ENST00000458591 TRAPPC2P0DI81 140 aa13.34□□□□□ -0.27
SCFD1-203ENST00000458591 TRAPPC2BP0DI82 140 aa13.34□□□□□ -0.27
SCFD1-203ENST00000458591 ADRB3P13945 408 aa13.34□□□□□ -0.27
SCFD1-203ENST00000458591 APEX1P27695 318 aaKnown RBP13.34□□□□□ -0.27
SCFD1-203ENST00000458591 OCLNQ16625 522 aa13.34□□□□□ -0.27
SCFD1-203ENST00000458591 CRTC2Q53ET0 693 aaPredicted RBP13.34□□□□□ -0.27
SCFD1-203ENST00000458591 Q5BKY6 102 aa13.34□□□□□ -0.27
SCFD1-203ENST00000458591 MORN4Q8NDC4 146 aa13.34□□□□□ -0.27
SCFD1-203ENST00000458591 OR52P1PQ8NH57 321 aa13.34□□□□□ -0.27
SCFD1-203ENST00000458591 UBE2E3Q969T4 207 aa13.34□□□□□ -0.27
SCFD1-203ENST00000458591 RNFT2Q96EX2 444 aa13.34□□□□□ -0.27
SCFD1-203ENST00000458591 SLC35G5Q96KT7 338 aa13.34□□□□□ -0.27
SCFD1-203ENST00000458591 NECTIN4Q96NY8 510 aa13.34□□□□□ -0.27
SCFD1-203ENST00000458591 SYNPO2LQ9H987 977 aa13.34□□□□□ -0.27
SCFD1-203ENST00000458591 AHSPQ9NZD4 102 aa13.34□□□□□ -0.27
SCFD1-203ENST00000458591 COMMD3Q9UBI1 195 aa13.34□□□□□ -0.27
SCFD1-203ENST00000458591 IGKV1-8A0A0C4DH67 115 aa13.33□□□□□ -0.28
SCFD1-203ENST00000458591 SHISA3A0PJX4 238 aa13.33□□□□□ -0.28
SCFD1-203ENST00000458591 NDUFS4O43181 175 aa13.33□□□□□ -0.28
SCFD1-203ENST00000458591 TMCC2O75069 709 aa13.33□□□□□ -0.28
SCFD1-203ENST00000458591 RAB36O95755 333 aa13.33□□□□□ -0.28
SCFD1-203ENST00000458591 TSPAN19P0C672 248 aa13.33□□□□□ -0.28
SCFD1-203ENST00000458591 KELP23276 732 aa13.33□□□□□ -0.28
SCFD1-203ENST00000458591 ITGB7P26010 798 aa13.33□□□□□ -0.28
SCFD1-203ENST00000458591 MAPK9P45984 424 aa13.33□□□□□ -0.28
SCFD1-203ENST00000458591 NCBP2P52298 156 aaKnown RBP eCLIP13.33□□□□□ -0.286e-13■■□□□ 13
SCFD1-203ENST00000458591 FABP5Q01469 135 aa13.33□□□□□ -0.28
SCFD1-203ENST00000458591 CDK10Q15131 360 aa13.33□□□□□ -0.28
SCFD1-203ENST00000458591 TCEA2Q15560 299 aa13.33□□□□□ -0.28
SCFD1-203ENST00000458591 NDUFAF5Q5TEU4 345 aa13.33□□□□□ -0.28
SCFD1-203ENST00000458591 PAMR1Q6UXH9 720 aa13.33□□□□□ -0.28
SCFD1-203ENST00000458591 GDPGP1Q6ZNW5 385 aa13.33□□□□□ -0.28
SCFD1-203ENST00000458591 VASH1Q7L8A9 365 aaPredicted RBP13.33□□□□□ -0.28
SCFD1-203ENST00000458591 DGLUCYQ7Z3D6 616 aa13.33□□□□□ -0.28
SCFD1-203ENST00000458591 PDZD3Q86UT5 571 aa13.33□□□□□ -0.28
SCFD1-203ENST00000458591 CCDC116Q8IYX3 515 aa13.33□□□□□ -0.28
SCFD1-203ENST00000458591 DTX3Q8N9I9 347 aa13.33□□□□□ -0.28
SCFD1-203ENST00000458591 AMDHD1Q96NU7 426 aa13.33□□□□□ -0.28
SCFD1-203ENST00000458591 ZNF607Q96SK3 696 aa13.33□□□□□ -0.28
SCFD1-203ENST00000458591 MENTQ9BUN1 341 aa13.33□□□□□ -0.28
SCFD1-203ENST00000458591 TRMT61BQ9BVS5 477 aaKnown RBP13.33□□□□□ -0.28
SCFD1-203ENST00000458591 EQTNQ9NQ60 294 aa13.33□□□□□ -0.28
SCFD1-203ENST00000458591 PLA2G10O15496 165 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms