RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 APOA1P02647 267 aa11.73□□□□□ -0.53
LINC00959-201ENST00000456581 TBC1D3HP0C7X1 549 aa11.73□□□□□ -0.53
LINC00959-201ENST00000456581 HSD3B1P14060 373 aa11.73□□□□□ -0.53
LINC00959-201ENST00000456581 HOXB3P14651 431 aaPredicted RBP11.73□□□□□ -0.53
LINC00959-201ENST00000456581 S100A1P23297 94 aa11.73□□□□□ -0.53
LINC00959-201ENST00000456581 HSD3B2P26439 372 aa11.73□□□□□ -0.53
LINC00959-201ENST00000456581 ASMTP46597 345 aa11.73□□□□□ -0.53
LINC00959-201ENST00000456581 SNRPD2P62316 118 aaKnown RBP11.73□□□□□ -0.53
LINC00959-201ENST00000456581 PIN1Q13526 163 aaPredicted RBP11.73□□□□□ -0.53
LINC00959-201ENST00000456581 GPR50Q13585 617 aa11.73□□□□□ -0.53
LINC00959-201ENST00000456581 ENPP2Q13822 863 aa11.73□□□□□ -0.53
LINC00959-201ENST00000456581 E2F2Q14209 437 aa11.73□□□□□ -0.53
LINC00959-201ENST00000456581 SPIN4Q56A73 249 aa11.73□□□□□ -0.53
LINC00959-201ENST00000456581 TBC1D3GQ6DHY5 549 aa11.73□□□□□ -0.53
LINC00959-201ENST00000456581 C22orf42Q6IC83 251 aa11.73□□□□□ -0.53
LINC00959-201ENST00000456581 TBC1D3CQ6IPX1 549 aa11.73□□□□□ -0.53
LINC00959-201ENST00000456581 TBC1D3Q8IZP1 549 aaPredicted RBP11.73□□□□□ -0.53
LINC00959-201ENST00000456581 BMPERQ8N8U9 685 aa11.73□□□□□ -0.53
LINC00959-201ENST00000456581 IL17RCQ8NAC3 791 aa11.73□□□□□ -0.53
LINC00959-201ENST00000456581 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.73□□□□□ -0.53
LINC00959-201ENST00000456581 GEMIN6Q8WXD5 167 aaKnown RBP11.73□□□□□ -0.53
LINC00959-201ENST00000456581 C12orf66Q96MD2 445 aa11.73□□□□□ -0.53
LINC00959-201ENST00000456581 F2RL3Q96RI0 385 aa11.73□□□□□ -0.53
LINC00959-201ENST00000456581 MENTQ9BUN1 341 aa11.73□□□□□ -0.53
LINC00959-201ENST00000456581 ANKHQ9HCJ1 492 aa11.73□□□□□ -0.53
LINC00959-201ENST00000456581 ANKDD1BA6NHY2 528 aa11.73□□□□□ -0.53
LINC00959-201ENST00000456581 M0R3H8 397 aa11.73□□□□□ -0.53
LINC00959-201ENST00000456581 DVL2O14641 736 aa11.73□□□□□ -0.53
LINC00959-201ENST00000456581 CDRT1O95170 752 aa11.73□□□□□ -0.53
LINC00959-201ENST00000456581 SNX4O95219 450 aa11.73□□□□□ -0.53
LINC00959-201ENST00000456581 HOXB6P17509 224 aaKnown RBP11.73□□□□□ -0.53
LINC00959-201ENST00000456581 C5AR1P21730 350 aa11.73□□□□□ -0.53
LINC00959-201ENST00000456581 CD72P21854 359 aa11.73□□□□□ -0.53
LINC00959-201ENST00000456581 CRYBB2P43320 205 aa11.73□□□□□ -0.53
LINC00959-201ENST00000456581 ZNF33BQ06732 778 aa11.73□□□□□ -0.53
LINC00959-201ENST00000456581 CAMK2BQ13554 666 aa11.73□□□□□ -0.53
LINC00959-201ENST00000456581 FBXO43Q4G163 708 aa11.73□□□□□ -0.53
LINC00959-201ENST00000456581 ARMC4Q5T2S8 1044 aa11.73□□□□□ -0.53
LINC00959-201ENST00000456581 OR2G6Q5TZ20 316 aa11.73□□□□□ -0.53
LINC00959-201ENST00000456581 DCUN1D3Q8IWE4 304 aa11.73□□□□□ -0.53
LINC00959-201ENST00000456581 CADM2Q8N3J6 435 aa11.73□□□□□ -0.53
LINC00959-201ENST00000456581 OR9Q1Q8NGQ5 310 aa11.73□□□□□ -0.53
LINC00959-201ENST00000456581 OR5K2Q8NHB8 316 aa11.73□□□□□ -0.53
LINC00959-201ENST00000456581 SLC38A5Q8WUX1 472 aa11.73□□□□□ -0.53
LINC00959-201ENST00000456581 REPS1Q96D71 796 aa11.73□□□□□ -0.53
LINC00959-201ENST00000456581 CDCA3Q99618 268 aaPredicted RBP11.73□□□□□ -0.53
LINC00959-201ENST00000456581 CDCA4Q9BXL8 241 aa11.73□□□□□ -0.53
LINC00959-201ENST00000456581 TEX101Q9BY14 249 aa11.73□□□□□ -0.53
LINC00959-201ENST00000456581 LMAN2LQ9H0V9 348 aa11.73□□□□□ -0.53
LINC00959-201ENST00000456581 CLN6Q9NWW5 311 aa11.73□□□□□ -0.53
LINC00959-201ENST00000456581 TVP23BQ9NYZ1 205 aa11.73□□□□□ -0.53
LINC00959-201ENST00000456581 REV1Q9UBZ9 1251 aa11.73□□□□□ -0.53
LINC00959-201ENST00000456581 CFL2Q9Y281 166 aa11.73□□□□□ -0.53
LINC00959-201ENST00000456581 KLHL20Q9Y2M5 609 aa11.73□□□□□ -0.53
LINC00959-201ENST00000456581 KLK4Q9Y5K2 254 aa11.73□□□□□ -0.53
LINC00959-201ENST00000456581 ENPP4Q9Y6X5 453 aa11.73□□□□□ -0.53
LINC00959-201ENST00000456581 POM121BA6NF01 834 aa11.72□□□□□ -0.53
LINC00959-201ENST00000456581 IFNW1P05000 195 aa11.72□□□□□ -0.53
LINC00959-201ENST00000456581 ALPPL2P10696 532 aa11.72□□□□□ -0.53
LINC00959-201ENST00000456581 DEFA1P59665 94 aa11.72□□□□□ -0.53
LINC00959-201ENST00000456581 DEFA3P59666 94 aa11.72□□□□□ -0.53
LINC00959-201ENST00000456581 PCDH1Q08174 1060 aa11.72□□□□□ -0.53
LINC00959-201ENST00000456581 ADAM15Q13444 863 aa11.72□□□□□ -0.53
LINC00959-201ENST00000456581 ZNF517Q6ZMY9 492 aaPredicted RBP11.72□□□□□ -0.53
LINC00959-201ENST00000456581 FAM129CQ86XR2 697 aa11.72□□□□□ -0.53
LINC00959-201ENST00000456581 GALNT12Q8IXK2 581 aa11.72□□□□□ -0.53
LINC00959-201ENST00000456581 CAMKK1Q8N5S9 505 aa11.72□□□□□ -0.53
LINC00959-201ENST00000456581 OR5D16Q8NGK9 328 aa11.72□□□□□ -0.53
LINC00959-201ENST00000456581 FERD3LQ96RJ6 166 aa11.72□□□□□ -0.53
LINC00959-201ENST00000456581 EFCAB11Q9BUY7 163 aa11.72□□□□□ -0.53
LINC00959-201ENST00000456581 POLR2J2Q9GZM3 115 aaKnown RBP11.72□□□□□ -0.53
LINC00959-201ENST00000456581 TOR4AQ9NXH8 423 aa11.72□□□□□ -0.53
LINC00959-201ENST00000456581 GPR52Q9Y2T5 361 aa11.72□□□□□ -0.53
LINC00959-201ENST00000456581 LSM2Q9Y333 95 aaKnown RBP11.72□□□□□ -0.53
LINC00959-201ENST00000456581 TDRD6O60522 2096 aaKnown RBP11.72□□□□□ -0.53
LINC00959-201ENST00000456581 SPTBP11277 2137 aa11.72□□□□□ -0.53
LINC00959-201ENST00000456581 A0A0X1KG70 313 aa11.72□□□□□ -0.53
LINC00959-201ENST00000456581 A0A1W2PPV9 198 aa11.72□□□□□ -0.53
LINC00959-201ENST00000456581 A0A1W2PQF6 199 aa11.72□□□□□ -0.53
LINC00959-201ENST00000456581 MEIOCA2RUB1 952 aa11.72□□□□□ -0.53
LINC00959-201ENST00000456581 ERVH48-1M5A8F1 160 aa11.72□□□□□ -0.53
LINC00959-201ENST00000456581 AKR7A2O43488 359 aa11.72□□□□□ -0.53
LINC00959-201ENST00000456581 PI15O43692 258 aa11.72□□□□□ -0.53
LINC00959-201ENST00000456581 TLX2O43763 284 aaPredicted RBP11.72□□□□□ -0.53
LINC00959-201ENST00000456581 PRKYO43930 277 aa11.72□□□□□ -0.53
LINC00959-201ENST00000456581 SH3BP5O60239 455 aa11.72□□□□□ -0.53
LINC00959-201ENST00000456581 LCMT2O60294 686 aaKnown RBP11.72□□□□□ -0.53
LINC00959-201ENST00000456581 GPR37L1O60883 481 aa11.72□□□□□ -0.53
LINC00959-201ENST00000456581 PRKRAO75569 313 aaKnown RBP11.72□□□□□ -0.53
LINC00959-201ENST00000456581 SLITRK5O94991 958 aa11.72□□□□□ -0.53
LINC00959-201ENST00000456581 KLF8O95600 359 aaPredicted RBP11.72□□□□□ -0.53
LINC00959-201ENST00000456581 SLC35G4P0C7Q5 338 aa11.72□□□□□ -0.53
LINC00959-201ENST00000456581 IL7P13232 177 aa11.72□□□□□ -0.53
LINC00959-201ENST00000456581 PRKCAP17252 672 aa11.72□□□□□ -0.53
LINC00959-201ENST00000456581 KELP23276 732 aa11.72□□□□□ -0.53
LINC00959-201ENST00000456581 HOXD11P31277 338 aaPredicted RBP11.72□□□□□ -0.53
LINC00959-201ENST00000456581 IGFALSP35858 605 aa11.72□□□□□ -0.53
LINC00959-201ENST00000456581 TRIM23P36406 574 aa11.72□□□□□ -0.53
LINC00959-201ENST00000456581 PXNP49023 591 aaPredicted RBP11.72□□□□□ -0.53
LINC00959-201ENST00000456581 GALK2Q01415 458 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms