RNA–Protein interactions for RNA: ENST00000454569.5

SCN9A-205, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,585 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-205ENST00000454569 HOPXQ9BPY8 73 aaPredicted RBP10.25□□□□□ -0.77
SCN9A-205ENST00000454569 DPH2Q9BQC3 489 aaPredicted RBP10.25□□□□□ -0.77
SCN9A-205ENST00000454569 GIMAP4Q9NUV9 329 aa10.25□□□□□ -0.77
SCN9A-205ENST00000454569 ZNF639Q9UID6 485 aa10.25□□□□□ -0.77
SCN9A-205ENST00000454569 PADI1Q9ULC6 663 aa10.25□□□□□ -0.77
SCN9A-205ENST00000454569 PCDHGB4Q9UN71 923 aa10.25□□□□□ -0.77
SCN9A-205ENST00000454569 MMACHCQ9Y4U1 282 aa10.25□□□□□ -0.77
SCN9A-205ENST00000454569 MRPS18BQ9Y676 258 aaKnown RBP10.25□□□□□ -0.77
SCN9A-205ENST00000454569 KCNE3Q9Y6H6 103 aa10.25□□□□□ -0.77
SCN9A-205ENST00000454569 EXPH5Q8NEV8 1989 aa10.24□□□□□ -0.77
SCN9A-205ENST00000454569 RNF103-CHMP3A0A140T963 221 aa10.24□□□□□ -0.77
SCN9A-205ENST00000454569 PRAMEF27A3QJZ7 478 aa10.24□□□□□ -0.77
SCN9A-205ENST00000454569 A8MUI8 341 aa10.24□□□□□ -0.77
SCN9A-205ENST00000454569 DNAJA2O60884 412 aa10.24□□□□□ -0.77
SCN9A-205ENST00000454569 NPPAP01160 153 aa10.24□□□□□ -0.77
SCN9A-205ENST00000454569 ALBP02768 609 aa10.24□□□□□ -0.77
SCN9A-205ENST00000454569 IFNA16P05015 189 aa10.24□□□□□ -0.77
SCN9A-205ENST00000454569 HEXBP07686 556 aa10.24□□□□□ -0.77
SCN9A-205ENST00000454569 ETFAP13804 333 aa10.24□□□□□ -0.77
SCN9A-205ENST00000454569 GPX2P18283 190 aa10.24□□□□□ -0.77
SCN9A-205ENST00000454569 IL10P22301 178 aa10.24□□□□□ -0.77
SCN9A-205ENST00000454569 EMP2P54851 167 aa10.24□□□□□ -0.77
SCN9A-205ENST00000454569 LIPEQ05469 1076 aa10.24□□□□□ -0.77
SCN9A-205ENST00000454569 SRSF6Q13247 344 aaKnown RBP10.24□□□□□ -0.77
SCN9A-205ENST00000454569 MAP7Q14244 749 aa10.24□□□□□ -0.77
SCN9A-205ENST00000454569 ZNF267Q14586 743 aaPredicted RBP10.24□□□□□ -0.77
SCN9A-205ENST00000454569 RGNQ15493 299 aa10.24□□□□□ -0.77
SCN9A-205ENST00000454569 ADRM1Q16186 407 aa10.24□□□□□ -0.77
SCN9A-205ENST00000454569 BNC2Q6ZN30 1099 aaPredicted RBP10.24□□□□□ -0.77
SCN9A-205ENST00000454569 ANKRD37Q7Z713 158 aa10.24□□□□□ -0.77
SCN9A-205ENST00000454569 IFNEQ86WN2 208 aa10.24□□□□□ -0.77
SCN9A-205ENST00000454569 CALHM3Q86XJ0 350 aa10.24□□□□□ -0.77
SCN9A-205ENST00000454569 RNF130Q86XS8 419 aa10.24□□□□□ -0.77
SCN9A-205ENST00000454569 ULK2Q8IYT8 1036 aa10.24□□□□□ -0.77
SCN9A-205ENST00000454569 NATD1Q8N6N6 113 aa10.24□□□□□ -0.77
SCN9A-205ENST00000454569 HORMAD2Q8N7B1 307 aa10.24□□□□□ -0.77
SCN9A-205ENST00000454569 NUP43Q8NFH3 380 aa10.24□□□□□ -0.77
SCN9A-205ENST00000454569 FKBP10Q96AY3 582 aa10.24□□□□□ -0.77
SCN9A-205ENST00000454569 DGAT2Q96PD7 388 aa10.24□□□□□ -0.77
SCN9A-205ENST00000454569 WDR77Q9BQA1 342 aaPredicted RBP10.24□□□□□ -0.77
SCN9A-205ENST00000454569 THUMPD3Q9BV44 507 aaKnown RBP10.24□□□□□ -0.77
SCN9A-205ENST00000454569 PCDHAC1Q9H158 963 aa10.24□□□□□ -0.77
SCN9A-205ENST00000454569 MMADHCQ9H3L0 296 aaPredicted RBP10.24□□□□□ -0.77
SCN9A-205ENST00000454569 KAT8Q9H7Z6 458 aaKnown RBP10.24□□□□□ -0.77
SCN9A-205ENST00000454569 ZCCHC3Q9NUD5 404 aaKnown RBP10.24□□□□□ -0.77
SCN9A-205ENST00000454569 C3orf18Q9UK00 162 aa10.24□□□□□ -0.77
SCN9A-205ENST00000454569 DTX4Q9Y2E6 619 aa10.24□□□□□ -0.77
SCN9A-205ENST00000454569 PTRH2Q9Y3E5 179 aaKnown RBP10.24□□□□□ -0.77
SCN9A-205ENST00000454569 PCNX3Q9H6A9 2034 aa10.24□□□□□ -0.77
SCN9A-205ENST00000454569 BLACEA4D250 179 aa10.23□□□□□ -0.77
SCN9A-205ENST00000454569 TRABD2BA6NFA1 517 aa10.23□□□□□ -0.77
SCN9A-205ENST00000454569 C17orf105B2RV13 164 aa10.23□□□□□ -0.77
SCN9A-205ENST00000454569 PLOD2O00469 737 aa10.23□□□□□ -0.77
SCN9A-205ENST00000454569 EMC8O43402 210 aa10.23□□□□□ -0.77
SCN9A-205ENST00000454569 OR10H2O60403 315 aa10.23□□□□□ -0.77
SCN9A-205ENST00000454569 BRINP1O60477 761 aa10.23□□□□□ -0.77
SCN9A-205ENST00000454569 RAD1O60671 282 aa10.23□□□□□ -0.77
SCN9A-205ENST00000454569 ALOX12BO75342 701 aa10.23□□□□□ -0.77
SCN9A-205ENST00000454569 PSMG1O95456 288 aa10.23□□□□□ -0.77
SCN9A-205ENST00000454569 DDAH2O95865 285 aa10.23□□□□□ -0.77
SCN9A-205ENST00000454569 HMGN2P05204 90 aaKnown RBP10.23□□□□□ -0.77
SCN9A-205ENST00000454569 GSK3BP49841 420 aa10.23□□□□□ -0.77
SCN9A-205ENST00000454569 ERFP50548 548 aa10.23□□□□□ -0.77
SCN9A-205ENST00000454569 PGDP52209 483 aa10.23□□□□□ -0.77
SCN9A-205ENST00000454569 ELF3P78545 371 aaPredicted RBP10.23□□□□□ -0.77
SCN9A-205ENST00000454569 MAP4K2Q12851 820 aa10.23□□□□□ -0.77
SCN9A-205ENST00000454569 TP53BP2Q13625 1128 aa10.23□□□□□ -0.77
SCN9A-205ENST00000454569 MAPK11Q15759 364 aa10.23□□□□□ -0.77
SCN9A-205ENST00000454569 TNFAIP8L2Q6P589 184 aaPredicted RBP10.23□□□□□ -0.77
SCN9A-205ENST00000454569 TMEM205Q6UW68 189 aa10.23□□□□□ -0.77
SCN9A-205ENST00000454569 SZRD1Q7Z422 152 aa10.23□□□□□ -0.77
SCN9A-205ENST00000454569 PTOV1Q86YD1 416 aa10.23□□□□□ -0.77
SCN9A-205ENST00000454569 OR2L13Q8N349 312 aa10.23□□□□□ -0.77
SCN9A-205ENST00000454569 OR8J3Q8NGG0 315 aa10.23□□□□□ -0.77
SCN9A-205ENST00000454569 OR5D16Q8NGK9 328 aa10.23□□□□□ -0.77
SCN9A-205ENST00000454569 ZFP28Q8NHY6 868 aa10.23□□□□□ -0.77
SCN9A-205ENST00000454569 ZNF675Q8TD23 568 aa10.23□□□□□ -0.77
SCN9A-205ENST00000454569 RAB8BQ92930 207 aa10.23□□□□□ -0.77
SCN9A-205ENST00000454569 RIT1Q92963 219 aa10.23□□□□□ -0.77
SCN9A-205ENST00000454569 NKD1Q969G9 470 aa10.23□□□□□ -0.77
SCN9A-205ENST00000454569 MAL2Q969L2 176 aa10.23□□□□□ -0.77
SCN9A-205ENST00000454569 NEURL3Q96EH8 262 aa10.23□□□□□ -0.77
SCN9A-205ENST00000454569 RBM18Q96H35 190 aaKnown RBP10.23□□□□□ -0.77
SCN9A-205ENST00000454569 CRB3Q9BUF7 120 aa10.23□□□□□ -0.77
SCN9A-205ENST00000454569 SPAG4Q9NPE6 437 aa10.23□□□□□ -0.77
SCN9A-205ENST00000454569 EQTNQ9NQ60 294 aa10.23□□□□□ -0.77
SCN9A-205ENST00000454569 C14orf105Q9NVL8 296 aa10.23□□□□□ -0.77
SCN9A-205ENST00000454569 NTMQ9P121 344 aa10.23□□□□□ -0.77
SCN9A-205ENST00000454569 EGFL7Q9UHF1 273 aa10.23□□□□□ -0.77
SCN9A-205ENST00000454569 IL17BQ9UHF5 180 aa10.23□□□□□ -0.77
SCN9A-205ENST00000454569 SLC7A8Q9UHI5 535 aa10.23□□□□□ -0.77
SCN9A-205ENST00000454569 GPN3Q9UHW5 284 aaPredicted RBP10.23□□□□□ -0.77
SCN9A-205ENST00000454569 ERVK-19Q9WJR5 959 aa10.23□□□□□ -0.77
SCN9A-205ENST00000454569 LOC400499M0QZD8 3231 aa10.23□□□□□ -0.77
SCN9A-205ENST00000454569 CFAP47Q6ZTR5 3102 aa10.23□□□□□ -0.77
SCN9A-205ENST00000454569 PLOD3O60568 738 aa10.22□□□□□ -0.77
SCN9A-205ENST00000454569 TNFRSF21O75509 655 aa10.22□□□□□ -0.77
SCN9A-205ENST00000454569 NCK1P16333 377 aa10.22□□□□□ -0.77
SCN9A-205ENST00000454569 TNNI3P19429 210 aa10.22□□□□□ -0.77
SCN9A-205ENST00000454569 CHI3L1P36222 383 aaPredicted RBP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms