RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 CLDN14O95500 239 aa8.9□□□□□ -0.98
USP54-207ENST00000451492 ANXA4P09525 319 aaPredicted RBP8.9□□□□□ -0.98
USP54-207ENST00000451492 CPA3P15088 417 aa8.9□□□□□ -0.98
USP54-207ENST00000451492 CSNK2A2P19784 350 aaPredicted RBP8.9□□□□□ -0.98
USP54-207ENST00000451492 GALNSP34059 522 aa8.9□□□□□ -0.98
USP54-207ENST00000451492 CCT5P48643 541 aa8.9□□□□□ -0.98
USP54-207ENST00000451492 MASP1P48740 699 aa8.9□□□□□ -0.98
USP54-207ENST00000451492 TMED10P49755 219 aaKnown RBP8.9□□□□□ -0.98
USP54-207ENST00000451492 PLCXD2Q0VAA5 305 aa8.9□□□□□ -0.98
USP54-207ENST00000451492 FUT7Q11130 342 aa8.9□□□□□ -0.98
USP54-207ENST00000451492 FOXO1Q12778 655 aa8.9□□□□□ -0.98
USP54-207ENST00000451492 DUSP8Q13202 625 aa8.9□□□□□ -0.98
USP54-207ENST00000451492 ART3Q13508 389 aa8.9□□□□□ -0.98
USP54-207ENST00000451492 PCLAFQ15004 111 aa8.9□□□□□ -0.98
USP54-207ENST00000451492 NTRK2Q16620 822 aa8.9□□□□□ -0.98
USP54-207ENST00000451492 LIPMQ5VYY2 423 aa8.9□□□□□ -0.98
USP54-207ENST00000451492 TDRPQ86YL5 185 aa8.9□□□□□ -0.98
USP54-207ENST00000451492 C10orf107Q8IVU9 208 aa8.9□□□□□ -0.98
USP54-207ENST00000451492 SRRM1Q8IYB3 904 aaKnown RBP8.9□□□□□ -0.98
USP54-207ENST00000451492 CCDC116Q8IYX3 515 aa8.9□□□□□ -0.98
USP54-207ENST00000451492 EID3Q8N140 333 aa8.9□□□□□ -0.98
USP54-207ENST00000451492 LIX1Q8N485 282 aa8.9□□□□□ -0.98
USP54-207ENST00000451492 MARVELD2Q8N4S9 558 aa8.9□□□□□ -0.98
USP54-207ENST00000451492 SLC15A4Q8N697 577 aa8.9□□□□□ -0.98
USP54-207ENST00000451492 GBP7Q8N8V2 638 aaPredicted RBP8.9□□□□□ -0.98
USP54-207ENST00000451492 ZNF441Q8N8Z8 693 aa8.9□□□□□ -0.98
USP54-207ENST00000451492 EIF1ADQ8N9N8 165 aaKnown RBP8.9□□□□□ -0.98
USP54-207ENST00000451492 OR9A2Q8NGT5 310 aa8.9□□□□□ -0.98
USP54-207ENST00000451492 AGR3Q8TD06 166 aa8.9□□□□□ -0.98
USP54-207ENST00000451492 CA5BP1Q8WTZ4 195 aa8.9□□□□□ -0.98
USP54-207ENST00000451492 APOPT1Q96IL0 206 aa8.9□□□□□ -0.98
USP54-207ENST00000451492 RILPQ96NA2 401 aa8.9□□□□□ -0.98
USP54-207ENST00000451492 VKORC1Q9BQB6 163 aa8.9□□□□□ -0.98
USP54-207ENST00000451492 MECRQ9BV79 373 aa8.9□□□□□ -0.98
USP54-207ENST00000451492 TP63Q9H3D4 680 aaPredicted RBP8.9□□□□□ -0.98
USP54-207ENST00000451492 ZNF703Q9H7S9 590 aaPredicted RBP8.9□□□□□ -0.98
USP54-207ENST00000451492 ZDHHC11Q9H8X9 412 aa8.9□□□□□ -0.98
USP54-207ENST00000451492 GIMAP4Q9NUV9 329 aa8.9□□□□□ -0.98
USP54-207ENST00000451492 COQ3Q9NZJ6 369 aa8.9□□□□□ -0.98
USP54-207ENST00000451492 CNOT11Q9UKZ1 510 aaKnown RBP8.9□□□□□ -0.98
USP54-207ENST00000451492 PSME2Q9UL46 239 aa8.9□□□□□ -0.98
USP54-207ENST00000451492 PCNX1Q96RV3 2341 aa8.89□□□□□ -0.99
USP54-207ENST00000451492 DCHS2Q6V1P9 2916 aa8.89□□□□□ -0.99
USP54-207ENST00000451492 TRGV5A0A0B4J1U4 118 aa8.89□□□□□ -0.99
USP54-207ENST00000451492 NKX2-6A6NCS4 301 aa8.89□□□□□ -0.99
USP54-207ENST00000451492 TP53I11O14683 189 aa8.89□□□□□ -0.99
USP54-207ENST00000451492 HNRNPRO43390 633 aaKnown RBP8.89□□□□□ -0.99
USP54-207ENST00000451492 TRAPPC6AO75865 159 aa8.89□□□□□ -0.99
USP54-207ENST00000451492 CBX7O95931 251 aa8.89□□□□□ -0.99
USP54-207ENST00000451492 ATP1B1P05026 303 aa8.89□□□□□ -0.99
USP54-207ENST00000451492 PRF1P14222 555 aa8.89□□□□□ -0.99
USP54-207ENST00000451492 COX6B1P14854 86 aa8.89□□□□□ -0.99
USP54-207ENST00000451492 ENDOUP21128 410 aaKnown RBP8.89□□□□□ -0.99
USP54-207ENST00000451492 ABCD3P28288 659 aa8.89□□□□□ -0.99
USP54-207ENST00000451492 CRHR1P34998 444 aa8.89□□□□□ -0.99
USP54-207ENST00000451492 TRA2BP62995 288 aaKnown RBP8.89□□□□□ -0.99
USP54-207ENST00000451492 ZNF763Q0D2J5 394 aa8.89□□□□□ -0.99
USP54-207ENST00000451492 C2orf80Q0P641 193 aa8.89□□□□□ -0.99
USP54-207ENST00000451492 ZNF155Q12901 538 aaPredicted RBP8.89□□□□□ -0.99
USP54-207ENST00000451492 SLC10A1Q14973 349 aa8.89□□□□□ -0.99
USP54-207ENST00000451492 HEPACAMQ14CZ8 416 aa8.89□□□□□ -0.99
USP54-207ENST00000451492 GXYLT1Q4G148 440 aa8.89□□□□□ -0.99
USP54-207ENST00000451492 EMC4Q5J8M3 183 aa8.89□□□□□ -0.99
USP54-207ENST00000451492 TMEM198Q66K66 360 aa8.89□□□□□ -0.99
USP54-207ENST00000451492 XKRXQ6PP77 449 aa8.89□□□□□ -0.99
USP54-207ENST00000451492 ZCCHC23Q6ZST2 131 aa8.89□□□□□ -0.99
USP54-207ENST00000451492 SH2D5Q6ZV89 423 aa8.89□□□□□ -0.99
USP54-207ENST00000451492 TRILQ7L0X0 811 aa8.89□□□□□ -0.99
USP54-207ENST00000451492 CCDC71Q8IV32 467 aaPredicted RBP8.89□□□□□ -0.99
USP54-207ENST00000451492 MCEMP1Q8IX19 187 aa8.89□□□□□ -0.99
USP54-207ENST00000451492 OR7G1Q8NGA0 311 aa8.89□□□□□ -0.99
USP54-207ENST00000451492 OR10Q1Q8NGQ4 319 aa8.89□□□□□ -0.99
USP54-207ENST00000451492 RDH11Q8TC12 318 aa8.89□□□□□ -0.99
USP54-207ENST00000451492 GFM2Q969S9 779 aaKnown RBP8.89□□□□□ -0.99
USP54-207ENST00000451492 ADIPOR1Q96A54 375 aa8.89□□□□□ -0.99
USP54-207ENST00000451492 OMA1Q96E52 524 aa8.89□□□□□ -0.99
USP54-207ENST00000451492 FAM111AQ96PZ2 611 aa8.89□□□□□ -0.99
USP54-207ENST00000451492 BBS4Q96RK4 519 aa8.89□□□□□ -0.99
USP54-207ENST00000451492 DMRTA2Q96SC8 542 aa8.89□□□□□ -0.99
USP54-207ENST00000451492 METTL7AQ9H8H3 244 aa8.89□□□□□ -0.99
USP54-207ENST00000451492 PPCSQ9HAB8 311 aa8.89□□□□□ -0.99
USP54-207ENST00000451492 PROK2Q9HC23 129 aa8.89□□□□□ -0.99
USP54-207ENST00000451492 SH2D2AQ9NP31 389 aa8.89□□□□□ -0.99
USP54-207ENST00000451492 ZFP64Q9NPA5 681 aa8.89□□□□□ -0.99
USP54-207ENST00000451492 MIEF1Q9NQG6 463 aa8.89□□□□□ -0.99
USP54-207ENST00000451492 PLSCR2Q9NRY7 297 aa8.89□□□□□ -0.99
USP54-207ENST00000451492 OXSMQ9NWU1 459 aa8.89□□□□□ -0.99
USP54-207ENST00000451492 KLRF1Q9NZS2 232 aa8.89□□□□□ -0.99
USP54-207ENST00000451492 CNIH4Q9P003 139 aa8.89□□□□□ -0.99
USP54-207ENST00000451492 SLC17A7Q9P2U7 560 aa8.89□□□□□ -0.99
USP54-207ENST00000451492 SPRR3Q9UBC9 169 aa8.89□□□□□ -0.99
USP54-207ENST00000451492 B4GALT7Q9UBV7 327 aa8.89□□□□□ -0.99
USP54-207ENST00000451492 ACAD8Q9UKU7 415 aa8.89□□□□□ -0.99
USP54-207ENST00000451492 KLF2Q9Y5W3 355 aaPredicted RBP8.89□□□□□ -0.99
USP54-207ENST00000451492 CENPEQ02224 2701 aa8.89□□□□□ -0.99
USP54-207ENST00000451492 UNC79Q9P2D8 2635 aa8.89□□□□□ -0.99
USP54-207ENST00000451492 NAV2Q8IVL1 2488 aa8.89□□□□□ -0.99
USP54-207ENST00000451492 TEX15Q9BXT5 2789 aa8.89□□□□□ -0.99
USP54-207ENST00000451492 C15orf38-AP3S2A0A0A6YYH1 394 aa8.88□□□□□ -0.99
USP54-207ENST00000451492 CAPN14A8MX76 684 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms