RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 LIPT1Q9Y234 373 aa13.35□□□□□ -0.27
USP39-207ENST00000450066 DLGAP1O14490 977 aa13.35□□□□□ -0.27
USP39-207ENST00000450066 ZNF749O43361 778 aa13.35□□□□□ -0.27
USP39-207ENST00000450066 SERPINB7O75635 380 aa13.35□□□□□ -0.27
USP39-207ENST00000450066 MFN2O95140 757 aa13.35□□□□□ -0.27
USP39-207ENST00000450066 AGR2O95994 175 aa13.35□□□□□ -0.27
USP39-207ENST00000450066 DCTP40126 519 aa13.35□□□□□ -0.27
USP39-207ENST00000450066 DUSP3P51452 185 aaPredicted RBP13.35□□□□□ -0.27
USP39-207ENST00000450066 IST1P53990 364 aa13.35□□□□□ -0.27
USP39-207ENST00000450066 ARSFP54793 590 aa13.35□□□□□ -0.27
USP39-207ENST00000450066 HSD17B7P56937 341 aa13.35□□□□□ -0.27
USP39-207ENST00000450066 IGLV3-21P80748 117 aaPredicted RBP13.35□□□□□ -0.27
USP39-207ENST00000450066 MGAT2Q10469 447 aa13.35□□□□□ -0.27
USP39-207ENST00000450066 FUT5Q11128 374 aa13.35□□□□□ -0.27
USP39-207ENST00000450066 SYT16Q17RD7 645 aa13.35□□□□□ -0.27
USP39-207ENST00000450066 NHSL2Q5HYW2 709 aa13.35□□□□□ -0.27
USP39-207ENST00000450066 C6orf52Q5T4I8 152 aa13.35□□□□□ -0.27
USP39-207ENST00000450066 YOD1Q5VVQ6 348 aaPredicted RBP13.35□□□□□ -0.27
USP39-207ENST00000450066 CDC73Q6P1J9 531 aa13.35□□□□□ -0.27
USP39-207ENST00000450066 TBPL2Q6SJ96 375 aa13.35□□□□□ -0.27
USP39-207ENST00000450066 KRT73Q86Y46 540 aa13.35□□□□□ -0.27
USP39-207ENST00000450066 METTL27Q8N6F8 245 aaPredicted RBP13.35□□□□□ -0.27
USP39-207ENST00000450066 SMYD1Q8NB12 490 aa13.35□□□□□ -0.27
USP39-207ENST00000450066 OR5K1Q8NHB7 308 aa13.35□□□□□ -0.27
USP39-207ENST00000450066 BBS10Q8TAM1 723 aa13.35□□□□□ -0.27
USP39-207ENST00000450066 RASSF5Q8WWW0 418 aa13.35□□□□□ -0.27
USP39-207ENST00000450066 GEMIN6Q8WXD5 167 aaKnown RBP13.35□□□□□ -0.27
USP39-207ENST00000450066 CTHRC1Q96CG8 243 aa13.35□□□□□ -0.27
USP39-207ENST00000450066 OTUB1Q96FW1 271 aaPredicted RBP13.35□□□□□ -0.27
USP39-207ENST00000450066 NDC1Q9BTX1 674 aa13.35□□□□□ -0.27
USP39-207ENST00000450066 MAT2BQ9NZL9 334 aa13.35□□□□□ -0.27
USP39-207ENST00000450066 PCDHGA5Q9Y5G8 931 aa13.35□□□□□ -0.27
USP39-207ENST00000450066 MYOCOSA0A1B0GUC4 107 aa13.34□□□□□ -0.27
USP39-207ENST00000450066 OR10H2O60403 315 aa13.34□□□□□ -0.27
USP39-207ENST00000450066 E2F6O75461 281 aa13.34□□□□□ -0.27
USP39-207ENST00000450066 ALDH3A2P51648 485 aa13.34□□□□□ -0.27
USP39-207ENST00000450066 STX4Q12846 297 aa13.34□□□□□ -0.27
USP39-207ENST00000450066 CLPPQ16740 277 aaPredicted RBP13.34□□□□□ -0.27
USP39-207ENST00000450066 DUSP7Q16829 419 aa13.34□□□□□ -0.27
USP39-207ENST00000450066 OTUD3Q5T2D3 398 aaPredicted RBP13.34□□□□□ -0.27
USP39-207ENST00000450066 MED25Q71SY5 747 aa13.34□□□□□ -0.27
USP39-207ENST00000450066 STK32CQ86UX6 486 aa13.34□□□□□ -0.27
USP39-207ENST00000450066 HIPK1Q86Z02 1210 aa13.34□□□□□ -0.27
USP39-207ENST00000450066 ST13P4Q8IZP2 240 aaPredicted RBP13.34□□□□□ -0.27
USP39-207ENST00000450066 MARVELD2Q8N4S9 558 aa13.34□□□□□ -0.27
USP39-207ENST00000450066 IFI44Q8TCB0 444 aa13.34□□□□□ -0.27
USP39-207ENST00000450066 MAGEE2Q8TD90 523 aaPredicted RBP13.34□□□□□ -0.27
USP39-207ENST00000450066 ADAMTS15Q8TE58 950 aa13.34□□□□□ -0.27
USP39-207ENST00000450066 TRNT1Q96Q11 434 aaKnown RBP13.34□□□□□ -0.27
USP39-207ENST00000450066 BTBD2Q9BX70 525 aa13.34□□□□□ -0.27
USP39-207ENST00000450066 ARRDC1-AS1Q9H2J1 176 aa13.34□□□□□ -0.27
USP39-207ENST00000450066 RUBCNLQ9H714 662 aa13.34□□□□□ -0.27
USP39-207ENST00000450066 PRTFDC1Q9NRG1 225 aa13.34□□□□□ -0.27
USP39-207ENST00000450066 THSD1Q9NS62 852 aa13.34□□□□□ -0.27
USP39-207ENST00000450066 NDUFAF4Q9P032 175 aa13.34□□□□□ -0.27
USP39-207ENST00000450066 CDC14AQ9UNH5 594 aa13.34□□□□□ -0.27
USP39-207ENST00000450066 GPC6Q9Y625 555 aaPredicted RBP13.34□□□□□ -0.27
USP39-207ENST00000450066 KCNE3Q9Y6H6 103 aa13.34□□□□□ -0.27
USP39-207ENST00000450066 A0A0G2JPF8 293 aa13.33□□□□□ -0.27
USP39-207ENST00000450066 IGHV5-10-1A0A0J9YXX1 117 aa13.33□□□□□ -0.27
USP39-207ENST00000450066 HNRNPCL2B2RXH8 293 aa13.33□□□□□ -0.27
USP39-207ENST00000450066 HNRNPCL3B7ZW38 293 aa13.33□□□□□ -0.27
USP39-207ENST00000450066 HPRP00739 348 aa13.33□□□□□ -0.27
USP39-207ENST00000450066 ALPLP05186 524 aa13.33□□□□□ -0.27
USP39-207ENST00000450066 CHRM4P08173 479 aa13.33□□□□□ -0.27
USP39-207ENST00000450066 ZNF883P0CG24 379 aa13.33□□□□□ -0.27
USP39-207ENST00000450066 HNRNPCL4P0DMR1 293 aa13.33□□□□□ -0.27
USP39-207ENST00000450066 ETS2P15036 469 aa13.33□□□□□ -0.27
USP39-207ENST00000450066 ITGA2P17301 1181 aa13.33□□□□□ -0.27
USP39-207ENST00000450066 CD247P20963 164 aa13.33□□□□□ -0.27
USP39-207ENST00000450066 ALAS2P22557 587 aa13.33□□□□□ -0.27
USP39-207ENST00000450066 XCR1P46094 333 aa13.33□□□□□ -0.27
USP39-207ENST00000450066 DAB2P98082 770 aa13.33□□□□□ -0.27
USP39-207ENST00000450066 MAP4K2Q12851 820 aa13.33□□□□□ -0.27
USP39-207ENST00000450066 DAG1Q14118 895 aa13.33□□□□□ -0.27
USP39-207ENST00000450066 ATAD3BQ5T9A4 648 aa13.33□□□□□ -0.27
USP39-207ENST00000450066 ZCCHC12Q6PEW1 402 aa13.33□□□□□ -0.27
USP39-207ENST00000450066 SHQ1Q6PI26 577 aaKnown RBP13.33□□□□□ -0.27
USP39-207ENST00000450066 TSEN54Q7Z6J9 526 aaKnown RBP13.33□□□□□ -0.27
USP39-207ENST00000450066 SLC16A11Q8NCK7 471 aa13.33□□□□□ -0.27
USP39-207ENST00000450066 SIMC1Q8NDZ2 872 aa13.33□□□□□ -0.27
USP39-207ENST00000450066 RBM18Q96H35 190 aaKnown RBP13.33□□□□□ -0.27
USP39-207ENST00000450066 COL21A1Q96P44 957 aa13.33□□□□□ -0.27
USP39-207ENST00000450066 ZNF347Q96SE7 839 aa13.33□□□□□ -0.27
USP39-207ENST00000450066 SPATA5L1Q9BVQ7 753 aa13.33□□□□□ -0.27
USP39-207ENST00000450066 EXD2Q9NVH0 621 aa13.33□□□□□ -0.27
USP39-207ENST00000450066 GIN1Q9NXP7 522 aa13.33□□□□□ -0.27
USP39-207ENST00000450066 SMPD3Q9NY59 655 aaPredicted RBP13.33□□□□□ -0.27
USP39-207ENST00000450066 CALML5Q9NZT1 146 aa13.33□□□□□ -0.27
USP39-207ENST00000450066 SCN2AQ99250 2005 aa13.33□□□□□ -0.28
USP39-207ENST00000450066 TGFBR3LH3BV60 316 aa13.33□□□□□ -0.28
USP39-207ENST00000450066 DSCR3O14972 297 aa13.33□□□□□ -0.28
USP39-207ENST00000450066 KHNYNO15037 678 aaKnown RBP13.33□□□□□ -0.28
USP39-207ENST00000450066 CDC123O75794 336 aaPredicted RBP13.33□□□□□ -0.28
USP39-207ENST00000450066 DIRAS1O95057 198 aa13.33□□□□□ -0.28
USP39-207ENST00000450066 ACY1Q03154 408 aa13.33□□□□□ -0.28
USP39-207ENST00000450066 ERV3-1Q14264 604 aa13.33□□□□□ -0.28
USP39-207ENST00000450066 GPAT3Q53EU6 434 aa13.33□□□□□ -0.28
USP39-207ENST00000450066 HEPHL1Q6MZM0 1159 aa13.33□□□□□ -0.28
USP39-207ENST00000450066 TMEM179BQ7Z7N9 219 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms