RNA–Protein interactions for RNA: ENST00000449476.6

CTC1-202, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 4,797 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-202ENST00000449476 RFT1Q96AA3 541 aa9.9□□□□□ -0.83
CTC1-202ENST00000449476 TCEAL4Q96EI5 215 aa9.9□□□□□ -0.83
CTC1-202ENST00000449476 DTD2Q96FN9 168 aa9.9□□□□□ -0.83
CTC1-202ENST00000449476 BCL7BQ9BQE9 202 aa9.9□□□□□ -0.83
CTC1-202ENST00000449476 SORBS1Q9BX66 1292 aaKnown RBP9.9□□□□□ -0.83
CTC1-202ENST00000449476 ZNF69Q9UC07 566 aa9.9□□□□□ -0.83
CTC1-202ENST00000449476 IL20RAQ9UHF4 553 aa9.9□□□□□ -0.83
CTC1-202ENST00000449476 ZNF639Q9UID6 485 aa9.9□□□□□ -0.83
CTC1-202ENST00000449476 C5orf51A6NDU8 294 aa9.89□□□□□ -0.83
CTC1-202ENST00000449476 CD8B2A6NJW9 211 aa9.89□□□□□ -0.83
CTC1-202ENST00000449476 LRRN3E7EW58 273 aa9.89□□□□□ -0.83
CTC1-202ENST00000449476 SLC19A2O60779 497 aa9.89□□□□□ -0.83
CTC1-202ENST00000449476 ZNF432O94892 652 aa9.89□□□□□ -0.83
CTC1-202ENST00000449476 S100A9P06702 114 aaKnown RBP9.89□□□□□ -0.83
CTC1-202ENST00000449476 CD8BP10966 210 aa9.89□□□□□ -0.83
CTC1-202ENST00000449476 ITGB7P26010 798 aa9.89□□□□□ -0.83
CTC1-202ENST00000449476 OC90Q02509 493 aaPredicted RBP9.89□□□□□ -0.83
CTC1-202ENST00000449476 BORAQ6PGQ7 559 aa9.89□□□□□ -0.83
CTC1-202ENST00000449476 EGFL6Q8IUX8 553 aa9.89□□□□□ -0.83
CTC1-202ENST00000449476 NRMQ8IXM6 262 aa9.89□□□□□ -0.83
CTC1-202ENST00000449476 OR4K17Q8NGC6 315 aa9.89□□□□□ -0.83
CTC1-202ENST00000449476 OR56A3Q8NH54 315 aa9.89□□□□□ -0.83
CTC1-202ENST00000449476 HS6ST2Q96MM7 605 aa9.89□□□□□ -0.83
CTC1-202ENST00000449476 LRRN3Q9H3W5 708 aa9.89□□□□□ -0.83
CTC1-202ENST00000449476 BAIAP2Q9UQB8 552 aa9.89□□□□□ -0.83
CTC1-202ENST00000449476 TCRBV21S2A2A0A5A6 115 aa9.89□□□□□ -0.83
CTC1-202ENST00000449476 OR52A4PA6NMU1 304 aa9.89□□□□□ -0.83
CTC1-202ENST00000449476 PPM1BO75688 479 aa9.89□□□□□ -0.83
CTC1-202ENST00000449476 AK1P00568 194 aa9.89□□□□□ -0.83
CTC1-202ENST00000449476 IFNA7P01567 189 aa9.89□□□□□ -0.83
CTC1-202ENST00000449476 DDCP20711 480 aa9.89□□□□□ -0.83
CTC1-202ENST00000449476 PUDPQ08623 228 aa9.89□□□□□ -0.83
CTC1-202ENST00000449476 CAMK1Q14012 370 aa9.89□□□□□ -0.83
CTC1-202ENST00000449476 HSD17B12Q53GQ0 312 aa9.89□□□□□ -0.83
CTC1-202ENST00000449476 C6orf183Q5T699 404 aa9.89□□□□□ -0.83
CTC1-202ENST00000449476 PRAMEF17Q5VTA0 474 aa9.89□□□□□ -0.83
CTC1-202ENST00000449476 FIGLAQ6QHK4 219 aa9.89□□□□□ -0.83
CTC1-202ENST00000449476 LCTLQ6UWM7 567 aa9.89□□□□□ -0.83
CTC1-202ENST00000449476 FAM217AQ8IXS0 508 aa9.89□□□□□ -0.83
CTC1-202ENST00000449476 Q8N9G6 341 aaPredicted RBP9.89□□□□□ -0.83
CTC1-202ENST00000449476 TMEM102Q8N9M5 508 aaPredicted RBP9.89□□□□□ -0.83
CTC1-202ENST00000449476 LRRC20Q8TCA0 184 aa9.89□□□□□ -0.83
CTC1-202ENST00000449476 SLC22A12Q96S37 553 aa9.89□□□□□ -0.83
CTC1-202ENST00000449476 POLE3Q9NRF9 147 aa9.89□□□□□ -0.83
CTC1-202ENST00000449476 PCDHA9Q9Y5H5 950 aa9.89□□□□□ -0.83
CTC1-202ENST00000449476 ANTXRLA6NF34 631 aa9.89□□□□□ -0.83
CTC1-202ENST00000449476 C9J4A7 227 aa9.89□□□□□ -0.83
CTC1-202ENST00000449476 C11orf98E9PRG8 122 aa9.89□□□□□ -0.83
CTC1-202ENST00000449476 EIF1AYO14602 144 aaKnown RBP9.89□□□□□ -0.83
CTC1-202ENST00000449476 PLD2O14939 933 aa9.89□□□□□ -0.83
CTC1-202ENST00000449476 RNF13O43567 381 aa9.89□□□□□ -0.83
CTC1-202ENST00000449476 RBMXL2O75526 392 aaKnown RBP9.89□□□□□ -0.83
CTC1-202ENST00000449476 JRKO75564 520 aa9.89□□□□□ -0.83
CTC1-202ENST00000449476 GABBR2O75899 941 aa9.89□□□□□ -0.83
CTC1-202ENST00000449476 CYB5AP00167 134 aa9.89□□□□□ -0.83
CTC1-202ENST00000449476 TIMP1P01033 207 aa9.89□□□□□ -0.83
CTC1-202ENST00000449476 TM4SF4P48230 202 aa9.89□□□□□ -0.83
CTC1-202ENST00000449476 SHFQ7M4L6 423 aa9.89□□□□□ -0.83
CTC1-202ENST00000449476 TMED4Q7Z7H5 227 aa9.89□□□□□ -0.83
CTC1-202ENST00000449476 PNLDC1Q8NA58 520 aaKnown RBP9.89□□□□□ -0.83
CTC1-202ENST00000449476 CHDHQ8NE62 594 aaPredicted RBP9.89□□□□□ -0.83
CTC1-202ENST00000449476 SUN5Q8TC36 379 aa9.89□□□□□ -0.83
CTC1-202ENST00000449476 ZNF431Q8TF32 576 aaPredicted RBP9.89□□□□□ -0.83
CTC1-202ENST00000449476 RBP7Q96R05 134 aa9.89□□□□□ -0.83
CTC1-202ENST00000449476 MTHFD2LQ9H903 347 aaPredicted RBP9.89□□□□□ -0.83
CTC1-202ENST00000449476 GXYLT2A0PJZ3 443 aa9.88□□□□□ -0.83
CTC1-202ENST00000449476 ACOT8O14734 319 aa9.88□□□□□ -0.83
CTC1-202ENST00000449476 KCNJ13O60928 360 aa9.88□□□□□ -0.83
CTC1-202ENST00000449476 IGFBP6P24592 240 aaPredicted RBP9.88□□□□□ -0.83
CTC1-202ENST00000449476 AK4P27144 223 aaPredicted RBP9.88□□□□□ -0.83
CTC1-202ENST00000449476 MAGEA12P43365 314 aa9.88□□□□□ -0.83
CTC1-202ENST00000449476 WDR5P61964 334 aaKnown RBP9.88□□□□□ -0.83
CTC1-202ENST00000449476 ELOCQ15369 112 aa9.88□□□□□ -0.83
CTC1-202ENST00000449476 ZNF791Q3KP31 576 aaPredicted RBP9.88□□□□□ -0.83
CTC1-202ENST00000449476 CBLL1Q75N03 491 aa9.88□□□□□ -0.83
CTC1-202ENST00000449476 PDZD3Q86UT5 571 aa9.88□□□□□ -0.83
CTC1-202ENST00000449476 FUNDC1Q8IVP5 155 aa9.88□□□□□ -0.83
CTC1-202ENST00000449476 DTX3Q8N9I9 347 aa9.88□□□□□ -0.83
CTC1-202ENST00000449476 MAELQ96JY0 434 aaKnown RBP9.88□□□□□ -0.83
CTC1-202ENST00000449476 ZNF583Q96ND8 569 aa9.88□□□□□ -0.83
CTC1-202ENST00000449476 ACTRT3Q9BYD9 372 aa9.88□□□□□ -0.83
CTC1-202ENST00000449476 SLC6A16Q9GZN6 736 aa9.88□□□□□ -0.83
CTC1-202ENST00000449476 WDR37Q9Y2I8 494 aa9.88□□□□□ -0.83
CTC1-202ENST00000449476 COL22A1Q8NFW1 1626 aaPredicted RBP9.88□□□□□ -0.83
CTC1-202ENST00000449476 IGLV3-10A0A075B6K4 115 aa9.88□□□□□ -0.83
CTC1-202ENST00000449476 PRLP01236 227 aa9.88□□□□□ -0.83
CTC1-202ENST00000449476 CDK4P11802 303 aa9.88□□□□□ -0.83
CTC1-202ENST00000449476 CRHBPP24387 322 aa9.88□□□□□ -0.83
CTC1-202ENST00000449476 GGT2P36268 569 aa9.88□□□□□ -0.83
CTC1-202ENST00000449476 CD97P48960 835 aa9.88□□□□□ -0.83
CTC1-202ENST00000449476 GPR143P51810 404 aa9.88□□□□□ -0.83
CTC1-202ENST00000449476 SHC2P98077 582 aa9.88□□□□□ -0.83
CTC1-202ENST00000449476 RASGRP3Q8IV61 690 aa9.88□□□□□ -0.83
CTC1-202ENST00000449476 TMEM156Q8N614 296 aa9.88□□□□□ -0.83
CTC1-202ENST00000449476 ZNF548Q8NEK5 533 aaPredicted RBP9.88□□□□□ -0.83
CTC1-202ENST00000449476 LKAAEAR1Q8TD35 194 aa9.88□□□□□ -0.83
CTC1-202ENST00000449476 SRA1Q9HD15 236 aaKnown RBP9.88□□□□□ -0.83
CTC1-202ENST00000449476 CHMP1AQ9HD42 196 aaPredicted RBP9.88□□□□□ -0.83
CTC1-202ENST00000449476 HSFX1Q9UBD0 423 aa9.88□□□□□ -0.83
CTC1-202ENST00000449476 ENPP5Q9UJA9 477 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms