RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 KIAA0040Q15053 153 aa12.78□□□□□ -0.36
SYNGAP1-204ENST00000449372 GTDC1Q4AE62 458 aa12.78□□□□□ -0.36
SYNGAP1-204ENST00000449372 DBX2Q6ZNG2 339 aa12.78□□□□□ -0.36
SYNGAP1-204ENST00000449372 STX12Q86Y82 276 aa12.78□□□□□ -0.36
SYNGAP1-204ENST00000449372 ADGRF3Q8IZF5 1079 aa12.78□□□□□ -0.36
SYNGAP1-204ENST00000449372 ERMAPQ96PL5 475 aaPredicted RBP12.78□□□□□ -0.36
SYNGAP1-204ENST00000449372 TMEM43Q9BTV4 400 aa12.78□□□□□ -0.36
SYNGAP1-204ENST00000449372 BIN3Q9NQY0 253 aa12.78□□□□□ -0.36
SYNGAP1-204ENST00000449372 SPG21Q9NZD8 308 aa12.78□□□□□ -0.36
SYNGAP1-204ENST00000449372 TSR3Q9UJK0 312 aaKnown RBP12.78□□□□□ -0.36
SYNGAP1-204ENST00000449372 STUB1Q9UNE7 303 aa12.78□□□□□ -0.36
SYNGAP1-204ENST00000449372 ERVK-19Q9WJR5 959 aa12.78□□□□□ -0.36
SYNGAP1-204ENST00000449372 MTCL1Q9Y4B5 1905 aaKnown RBP12.78□□□□□ -0.36
SYNGAP1-204ENST00000449372 M0R129 80 aa12.77□□□□□ -0.36
SYNGAP1-204ENST00000449372 SELLP14151 372 aa12.77□□□□□ -0.36
SYNGAP1-204ENST00000449372 MAPK9P45984 424 aa12.77□□□□□ -0.36
SYNGAP1-204ENST00000449372 VSX2P58304 361 aaPredicted RBP12.77□□□□□ -0.36
SYNGAP1-204ENST00000449372 RPS7P62081 194 aaKnown RBP12.77□□□□□ -0.36
SYNGAP1-204ENST00000449372 CAMK2DQ13557 499 aa12.77□□□□□ -0.36
SYNGAP1-204ENST00000449372 C16orf59Q7L2K0 433 aa12.77□□□□□ -0.36
SYNGAP1-204ENST00000449372 TMEM169Q96HH4 297 aa12.77□□□□□ -0.36
SYNGAP1-204ENST00000449372 GABARAPL3Q9BY60 117 aa12.77□□□□□ -0.36
SYNGAP1-204ENST00000449372 ZBP1Q9H171 429 aa12.77□□□□□ -0.36
SYNGAP1-204ENST00000449372 ZFYVE1Q9HBF4 777 aa12.77□□□□□ -0.36
SYNGAP1-204ENST00000449372 BPIFA1Q9NP55 256 aa12.77□□□□□ -0.36
SYNGAP1-204ENST00000449372 ZNF282Q9UDV7 671 aaPredicted RBP12.77□□□□□ -0.36
SYNGAP1-204ENST00000449372 DTX4Q9Y2E6 619 aa12.77□□□□□ -0.36
SYNGAP1-204ENST00000449372 LGI1O95970 557 aa12.77□□□□□ -0.37
SYNGAP1-204ENST00000449372 ADRA2AP08913 450 aa12.77□□□□□ -0.37
SYNGAP1-204ENST00000449372 ENGP17813 658 aa12.77□□□□□ -0.37
SYNGAP1-204ENST00000449372 NSG1P42857 185 aa12.77□□□□□ -0.37
SYNGAP1-204ENST00000449372 VLDLRP98155 873 aa12.77□□□□□ -0.37
SYNGAP1-204ENST00000449372 ZNF124Q15973 351 aa12.77□□□□□ -0.37
SYNGAP1-204ENST00000449372 IFI44LQ53G44 452 aa12.77□□□□□ -0.37
SYNGAP1-204ENST00000449372 CNIH2Q6PI25 160 aa12.77□□□□□ -0.37
SYNGAP1-204ENST00000449372 LILRA6Q6PI73 481 aa12.77□□□□□ -0.37
SYNGAP1-204ENST00000449372 GPR155Q7Z3F1 870 aa12.77□□□□□ -0.37
SYNGAP1-204ENST00000449372 JAZF1Q86VZ6 243 aa12.77□□□□□ -0.37
SYNGAP1-204ENST00000449372 MSRB3Q8IXL7 192 aa12.77□□□□□ -0.37
SYNGAP1-204ENST00000449372 OTUB1Q96FW1 271 aaPredicted RBP12.77□□□□□ -0.37
SYNGAP1-204ENST00000449372 P2RY12Q9H244 342 aa12.77□□□□□ -0.37
SYNGAP1-204ENST00000449372 PPP1R3EQ9H7J1 279 aa12.77□□□□□ -0.37
SYNGAP1-204ENST00000449372 SYNDIG1Q9H7V2 258 aa12.77□□□□□ -0.37
SYNGAP1-204ENST00000449372 ZNF226Q9NYT6 803 aa12.77□□□□□ -0.37
SYNGAP1-204ENST00000449372 CFAP20Q9Y6A4 193 aaKnown RBP12.77□□□□□ -0.37
SYNGAP1-204ENST00000449372 FAM170BA6NMN3 283 aa12.77□□□□□ -0.37
SYNGAP1-204ENST00000449372 SLC16A5O15375 505 aa12.77□□□□□ -0.37
SYNGAP1-204ENST00000449372 TOXO94900 526 aa12.77□□□□□ -0.37
SYNGAP1-204ENST00000449372 TIMP1P01033 207 aa12.77□□□□□ -0.37
SYNGAP1-204ENST00000449372 IRF1P10914 325 aa12.77□□□□□ -0.37
SYNGAP1-204ENST00000449372 HSD3B1P14060 373 aa12.77□□□□□ -0.37
SYNGAP1-204ENST00000449372 HSD3B2P26439 372 aa12.77□□□□□ -0.37
SYNGAP1-204ENST00000449372 SPAM1P38567 509 aa12.77□□□□□ -0.37
SYNGAP1-204ENST00000449372 RPIAP49247 311 aa12.77□□□□□ -0.37
SYNGAP1-204ENST00000449372 BCL2L1Q07817 233 aa12.77□□□□□ -0.37
SYNGAP1-204ENST00000449372 RBBP4Q09028 425 aa12.77□□□□□ -0.37
SYNGAP1-204ENST00000449372 UGT8Q16880 541 aa12.77□□□□□ -0.37
SYNGAP1-204ENST00000449372 MPEG1Q2M385 716 aa12.77□□□□□ -0.37
SYNGAP1-204ENST00000449372 SBSNQ6UWP8 590 aa12.77□□□□□ -0.37
SYNGAP1-204ENST00000449372 GAREM2Q75VX8 874 aa12.77□□□□□ -0.37
SYNGAP1-204ENST00000449372 PIANPQ8IYJ0 282 aa12.77□□□□□ -0.37
SYNGAP1-204ENST00000449372 CLDN22Q8N7P3 220 aa12.77□□□□□ -0.37
SYNGAP1-204ENST00000449372 CHTF18Q8WVB6 975 aa12.77□□□□□ -0.37
SYNGAP1-204ENST00000449372 EID2BQ96D98 161 aa12.77□□□□□ -0.37
SYNGAP1-204ENST00000449372 CNOT2Q9NZN8 540 aaKnown RBP12.77□□□□□ -0.37
SYNGAP1-204ENST00000449372 IL17CQ9P0M4 197 aa12.77□□□□□ -0.37
SYNGAP1-204ENST00000449372 PCDHGC4Q9Y5F7 938 aa12.77□□□□□ -0.37
SYNGAP1-204ENST00000449372 MGAT4DA6NG13 374 aa12.76□□□□□ -0.37
SYNGAP1-204ENST00000449372 A8MVJ9 347 aa12.76□□□□□ -0.37
SYNGAP1-204ENST00000449372 OR1I1O60431 355 aa12.76□□□□□ -0.37
SYNGAP1-204ENST00000449372 LPLP06858 475 aa12.76□□□□□ -0.37
SYNGAP1-204ENST00000449372 PRPH2P23942 346 aa12.76□□□□□ -0.37
SYNGAP1-204ENST00000449372 ZNF628Q5EBL2 1059 aa12.76□□□□□ -0.37
SYNGAP1-204ENST00000449372 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.76□□□□□ -0.37
SYNGAP1-204ENST00000449372 MACC1Q6ZN28 852 aa12.76□□□□□ -0.37
SYNGAP1-204ENST00000449372 LMLNQ96KR4 655 aa12.76□□□□□ -0.37
SYNGAP1-204ENST00000449372 MND1Q9BWT6 205 aa12.76□□□□□ -0.37
SYNGAP1-204ENST00000449372 MED9Q9NWA0 146 aa12.76□□□□□ -0.37
SYNGAP1-204ENST00000449372 HYKKA2RU49 373 aa12.76□□□□□ -0.37
SYNGAP1-204ENST00000449372 POM121CA8CG34 1229 aa12.76□□□□□ -0.37
SYNGAP1-204ENST00000449372 STMND1H3BQB6 276 aa12.76□□□□□ -0.37
SYNGAP1-204ENST00000449372 IL1AP01583 271 aa12.76□□□□□ -0.37
SYNGAP1-204ENST00000449372 CKMT1AP12532 417 aa12.76□□□□□ -0.37
SYNGAP1-204ENST00000449372 CSF2RAP15509 400 aa12.76□□□□□ -0.37
SYNGAP1-204ENST00000449372 ITGB7P26010 798 aa12.76□□□□□ -0.37
SYNGAP1-204ENST00000449372 SDC2P34741 201 aa12.76□□□□□ -0.37
SYNGAP1-204ENST00000449372 DEFA5Q01523 94 aa12.76□□□□□ -0.37
SYNGAP1-204ENST00000449372 FGL1Q08830 312 aa12.76□□□□□ -0.37
SYNGAP1-204ENST00000449372 SMAD2Q15796 467 aaKnown RBP12.76□□□□□ -0.37
SYNGAP1-204ENST00000449372 C5orf46Q6UWT4 87 aa12.76□□□□□ -0.37
SYNGAP1-204ENST00000449372 UNC5DQ6UXZ4 953 aa12.76□□□□□ -0.37
SYNGAP1-204ENST00000449372 C3P1Q6ZMU1 363 aa12.76□□□□□ -0.37
SYNGAP1-204ENST00000449372 NLRC3Q7RTR2 1065 aa12.76□□□□□ -0.37
SYNGAP1-204ENST00000449372 C10orf111Q8N326 155 aa12.76□□□□□ -0.37
SYNGAP1-204ENST00000449372 FTMTQ8N4E7 242 aa12.76□□□□□ -0.37
SYNGAP1-204ENST00000449372 BVESQ8NE79 360 aa12.76□□□□□ -0.37
SYNGAP1-204ENST00000449372 OR10G2Q8NGC3 310 aa12.76□□□□□ -0.37
SYNGAP1-204ENST00000449372 NSMAFQ92636 917 aa12.76□□□□□ -0.37
SYNGAP1-204ENST00000449372 PURGQ9UJV8 347 aaKnown RBP12.76□□□□□ -0.37
SYNGAP1-204ENST00000449372 PCDHB9Q9Y5E1 797 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms