RNA–Protein interactions for RNA: ENST00000448905.6

HMGB3-204, Transcript of high mobility group box 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGB3, Length 812 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-204ENST00000448905 WDYHV1Q96HA8 205 aa12.15□□□□□ -0.46
HMGB3-204ENST00000448905 ZFP3Q96NJ6 502 aa12.15□□□□□ -0.46
HMGB3-204ENST00000448905 UGT2B28Q9BY64 529 aa12.15□□□□□ -0.46
HMGB3-204ENST00000448905 RAB17Q9H0T7 212 aa12.15□□□□□ -0.46
HMGB3-204ENST00000448905 UBQLN3Q9H347 655 aa12.15□□□□□ -0.46
HMGB3-204ENST00000448905 NMRK1Q9NWW6 199 aa12.15□□□□□ -0.46
HMGB3-204ENST00000448905 BCAP29Q9UHQ4 241 aa12.15□□□□□ -0.46
HMGB3-204ENST00000448905 ADAM29Q9UKF5 820 aa12.15□□□□□ -0.46
HMGB3-204ENST00000448905 RNF11Q9Y3C5 154 aa12.15□□□□□ -0.46
HMGB3-204ENST00000448905 GNB5O14775 395 aa12.14□□□□□ -0.47
HMGB3-204ENST00000448905 KLHL2O95198 593 aa12.14□□□□□ -0.47
HMGB3-204ENST00000448905 GBAP04062 536 aa12.14□□□□□ -0.47
HMGB3-204ENST00000448905 ABCB1P08183 1280 aaPredicted RBP12.14□□□□□ -0.47
HMGB3-204ENST00000448905 TMIGD3P0DMS9 266 aaPredicted RBP12.14□□□□□ -0.47
HMGB3-204ENST00000448905 CPMP14384 443 aa12.14□□□□□ -0.47
HMGB3-204ENST00000448905 HOXB4P17483 251 aaPredicted RBP12.14□□□□□ -0.47
HMGB3-204ENST00000448905 ABCD3P28288 659 aa12.14□□□□□ -0.47
HMGB3-204ENST00000448905 TYK2P29597 1187 aa12.14□□□□□ -0.47
HMGB3-204ENST00000448905 CCNG1P51959 295 aa12.14□□□□□ -0.47
HMGB3-204ENST00000448905 AGFG1P52594 562 aaKnown RBP12.14□□□□□ -0.47
HMGB3-204ENST00000448905 DIO3P55073 304 aa12.14□□□□□ -0.47
HMGB3-204ENST00000448905 WNT3P56703 355 aa12.14□□□□□ -0.47
HMGB3-204ENST00000448905 DCAF7P61962 342 aa12.14□□□□□ -0.47
HMGB3-204ENST00000448905 MRPS25P82663 173 aaKnown RBP12.14□□□□□ -0.47
HMGB3-204ENST00000448905 MAP4K2Q12851 820 aa12.14□□□□□ -0.47
HMGB3-204ENST00000448905 EIPR1Q53HC9 387 aa12.14□□□□□ -0.47
HMGB3-204ENST00000448905 BICRALQ6AI39 1079 aa12.14□□□□□ -0.47
HMGB3-204ENST00000448905 POMZP3Q6PJE2 187 aa12.14□□□□□ -0.47
HMGB3-204ENST00000448905 GOLGA7Q7Z5G4 137 aa12.14□□□□□ -0.47
HMGB3-204ENST00000448905 OR14L1PQ8NHC6 308 aa12.14□□□□□ -0.47
HMGB3-204ENST00000448905 WDR20Q8TBZ3 569 aa12.14□□□□□ -0.47
HMGB3-204ENST00000448905 ANP32BQ92688 251 aaKnown RBP12.14□□□□□ -0.47
HMGB3-204ENST00000448905 TMCO6Q96DC7 493 aa12.14□□□□□ -0.47
HMGB3-204ENST00000448905 DACH2Q96NX9 599 aa12.14□□□□□ -0.47
HMGB3-204ENST00000448905 RBM24Q9BX46 236 aaKnown RBP12.14□□□□□ -0.47
HMGB3-204ENST00000448905 ZNF717Q9BY31 904 aaPredicted RBP12.14□□□□□ -0.47
HMGB3-204ENST00000448905 NOL11Q9H8H0 719 aaKnown RBP12.14□□□□□ -0.47
HMGB3-204ENST00000448905 CPSF2Q9P2I0 782 aaKnown RBP12.14□□□□□ -0.47
HMGB3-204ENST00000448905 TMCO1Q9UM00 188 aa12.14□□□□□ -0.47
HMGB3-204ENST00000448905 EIF3LQ9Y262 564 aaKnown RBP12.14□□□□□ -0.47
HMGB3-204ENST00000448905 A0A096LPK6 155 aa12.13□□□□□ -0.47
HMGB3-204ENST00000448905 C1orf226A1L170 272 aa12.13□□□□□ -0.47
HMGB3-204ENST00000448905 CLCA1A8K7I4 914 aa12.13□□□□□ -0.47
HMGB3-204ENST00000448905 FAM171A2A8MVW0 826 aa12.13□□□□□ -0.47
HMGB3-204ENST00000448905 ACOX3O15254 700 aa12.13□□□□□ -0.47
HMGB3-204ENST00000448905 ARHGEF9O43307 516 aa12.13□□□□□ -0.47
HMGB3-204ENST00000448905 ICOSLGO75144 302 aa12.13□□□□□ -0.47
HMGB3-204ENST00000448905 PPM1BO75688 479 aa12.13□□□□□ -0.47
HMGB3-204ENST00000448905 ATE1O95260 518 aa12.13□□□□□ -0.47
HMGB3-204ENST00000448905 CLPSP04118 112 aa12.13□□□□□ -0.47
HMGB3-204ENST00000448905 RBP1P09455 135 aa12.13□□□□□ -0.47
HMGB3-204ENST00000448905 RHOXF2BP0C7M4 288 aa12.13□□□□□ -0.47
HMGB3-204ENST00000448905 CSNK2A2P19784 350 aaPredicted RBP12.13□□□□□ -0.47
HMGB3-204ENST00000448905 CHMP24386 653 aa12.13□□□□□ -0.47
HMGB3-204ENST00000448905 ADSLP30566 484 aaPredicted RBP12.13□□□□□ -0.47
HMGB3-204ENST00000448905 PHBP35232 272 aa12.13□□□□□ -0.47
HMGB3-204ENST00000448905 GMPRP36959 345 aa12.13□□□□□ -0.47
HMGB3-204ENST00000448905 CPA2P48052 419 aa12.13□□□□□ -0.47
HMGB3-204ENST00000448905 MAPK12P53778 367 aa12.13□□□□□ -0.47
HMGB3-204ENST00000448905 NAGLUP54802 743 aa12.13□□□□□ -0.47
HMGB3-204ENST00000448905 FNDC7Q5VTL7 733 aa12.13□□□□□ -0.47
HMGB3-204ENST00000448905 FRG2Q64ET8 278 aa12.13□□□□□ -0.47
HMGB3-204ENST00000448905 TMEM81Q6P7N7 255 aa12.13□□□□□ -0.47
HMGB3-204ENST00000448905 AAGABQ6PD74 315 aa12.13□□□□□ -0.47
HMGB3-204ENST00000448905 ANGPTL8Q6UXH0 198 aa12.13□□□□□ -0.47
HMGB3-204ENST00000448905 CHMP1BQ7LBR1 199 aa12.13□□□□□ -0.47
HMGB3-204ENST00000448905 YRDCQ86U90 279 aaKnown RBP12.13□□□□□ -0.47
HMGB3-204ENST00000448905 PRR22Q8IZ63 422 aa12.13□□□□□ -0.47
HMGB3-204ENST00000448905 VWA5B2Q8N398 1253 aa12.13□□□□□ -0.47
HMGB3-204ENST00000448905 FAM83FQ8NEG4 500 aaPredicted RBP12.13□□□□□ -0.47
HMGB3-204ENST00000448905 WNT2BQ93097 391 aa12.13□□□□□ -0.47
HMGB3-204ENST00000448905 UCN3Q969E3 161 aa12.13□□□□□ -0.47
HMGB3-204ENST00000448905 MRRFQ96E11 262 aaKnown RBP12.13□□□□□ -0.47
HMGB3-204ENST00000448905 LCORQ96JN0 433 aaPredicted RBP12.13□□□□□ -0.47
HMGB3-204ENST00000448905 FRG2BQ96QU4 278 aa12.13□□□□□ -0.47
HMGB3-204ENST00000448905 SFXN3Q9BWM7 321 aa12.13□□□□□ -0.47
HMGB3-204ENST00000448905 BRINP2Q9C0B6 783 aa12.13□□□□□ -0.47
HMGB3-204ENST00000448905 PIGMQ9H3S5 423 aa12.13□□□□□ -0.47
HMGB3-204ENST00000448905 ELOVL6Q9H5J4 265 aa12.13□□□□□ -0.47
HMGB3-204ENST00000448905 GRHL1Q9NZI5 618 aa12.13□□□□□ -0.47
HMGB3-204ENST00000448905 KLRF1Q9NZS2 232 aa12.13□□□□□ -0.47
HMGB3-204ENST00000448905 JKAMPQ9P055 326 aa12.13□□□□□ -0.47
HMGB3-204ENST00000448905 PRODH2Q9UF12 536 aa12.13□□□□□ -0.47
HMGB3-204ENST00000448905 EXO1Q9UQ84 846 aaKnown RBP12.13□□□□□ -0.47
HMGB3-204ENST00000448905 RPH3AQ9Y2J0 694 aaPredicted RBP12.13□□□□□ -0.47
HMGB3-204ENST00000448905 ZNF780BQ9Y6R6 833 aa12.13□□□□□ -0.47
HMGB3-204ENST00000448905 PRRC2AP48634 2157 aaKnown RBP12.13□□□□□ -0.47
HMGB3-204ENST00000448905 INTS1Q8N201 2190 aaKnown RBP12.13□□□□□ -0.47
HMGB3-204ENST00000448905 EML6Q6ZMW3 1958 aa12.12□□□□□ -0.47
HMGB3-204ENST00000448905 H0Y3Z8 333 aa12.12□□□□□ -0.47
HMGB3-204ENST00000448905 RAD51CO43502 376 aa12.12□□□□□ -0.47
HMGB3-204ENST00000448905 SMIM24O75264 130 aa12.12□□□□□ -0.47
HMGB3-204ENST00000448905 ERAL1O75616 437 aaKnown RBP12.12□□□□□ -0.47
HMGB3-204ENST00000448905 BCAS2O75934 225 aaPredicted RBP12.12□□□□□ -0.47
HMGB3-204ENST00000448905 RCBTB2O95199 551 aa12.12□□□□□ -0.47
HMGB3-204ENST00000448905 DRD5P21918 477 aa12.12□□□□□ -0.47
HMGB3-204ENST00000448905 PTPN6P29350 595 aa12.12□□□□□ -0.47
HMGB3-204ENST00000448905 SERPINB8P50452 374 aa12.12□□□□□ -0.47
HMGB3-204ENST00000448905 SRYQ05066 204 aa12.12□□□□□ -0.47
HMGB3-204ENST00000448905 PLCXD2Q0VAA5 305 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms