RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 IHHQ14623 411 aa18.18■□□□□ 0.5
HMGA1-205ENST00000447654 TCTE1Q5JU00 501 aa18.18■□□□□ 0.5
HMGA1-205ENST00000447654 TMEM91Q6ZNR0 172 aa18.18■□□□□ 0.5
HMGA1-205ENST00000447654 ANKRD46Q86W74 232 aa18.18■□□□□ 0.5
HMGA1-205ENST00000447654 PAQR7Q86WK9 346 aa18.18■□□□□ 0.5
HMGA1-205ENST00000447654 GPR65Q8IYL9 337 aa18.18■□□□□ 0.5
HMGA1-205ENST00000447654 ZNF683Q8IZ20 524 aa18.18■□□□□ 0.5
HMGA1-205ENST00000447654 DBF4BQ8NFT6 615 aa18.18■□□□□ 0.5
HMGA1-205ENST00000447654 OR56B4Q8NH76 319 aa18.18■□□□□ 0.5
HMGA1-205ENST00000447654 TREX2Q9BQ50 279 aaPredicted RBP18.18■□□□□ 0.5
HMGA1-205ENST00000447654 TSSK6Q9BXA6 273 aa18.18■□□□□ 0.5
HMGA1-205ENST00000447654 GSN-AS1Q9NRJ2 163 aa18.18■□□□□ 0.5
HMGA1-205ENST00000447654 IMP3Q9NV31 184 aaKnown RBP18.18■□□□□ 0.5
HMGA1-205ENST00000447654 EXTL2Q9UBQ6 330 aa18.18■□□□□ 0.5
HMGA1-205ENST00000447654 RAI2Q9Y5P3 530 aa18.18■□□□□ 0.5
HMGA1-205ENST00000447654 DOCK4Q8N1I0 1966 aa18.18■□□□□ 0.5
HMGA1-205ENST00000447654 TRABD2BA6NFA1 517 aa18.18■□□□□ 0.5
HMGA1-205ENST00000447654 NPIPB8E9PQR5 432 aa18.18■□□□□ 0.5
HMGA1-205ENST00000447654 MANBAO00462 879 aa18.18■□□□□ 0.5
HMGA1-205ENST00000447654 SOX30O94993 753 aa18.18■□□□□ 0.5
HMGA1-205ENST00000447654 EBLN1P0CF75 366 aa18.18■□□□□ 0.5
HMGA1-205ENST00000447654 PKMP14618 531 aaKnown RBP18.18■□□□□ 0.5
HMGA1-205ENST00000447654 GALP22466 123 aa18.18■□□□□ 0.5
HMGA1-205ENST00000447654 GDI2P50395 445 aaKnown RBP18.18■□□□□ 0.5
HMGA1-205ENST00000447654 CRYBA2P53672 197 aa18.18■□□□□ 0.5
HMGA1-205ENST00000447654 RPS25P62851 125 aaKnown RBP18.18■□□□□ 0.5
HMGA1-205ENST00000447654 HMGCS1Q01581 520 aa18.18■□□□□ 0.5
HMGA1-205ENST00000447654 ST3GAL2Q16842 350 aa18.18■□□□□ 0.5
HMGA1-205ENST00000447654 ZNF528Q3MIS6 628 aa18.18■□□□□ 0.5
HMGA1-205ENST00000447654 CCDC157Q569K6 752 aa18.18■□□□□ 0.5
HMGA1-205ENST00000447654 OR5M3Q8NGP4 307 aa18.18■□□□□ 0.5
HMGA1-205ENST00000447654 KCTD12Q96CX2 325 aaKnown RBP18.18■□□□□ 0.5
HMGA1-205ENST00000447654 MYEOVQ96EZ4 313 aa18.18■□□□□ 0.5
HMGA1-205ENST00000447654 CAPNS2Q96L46 248 aa18.18■□□□□ 0.5
HMGA1-205ENST00000447654 OR4K3Q96R72 315 aa18.18■□□□□ 0.5
HMGA1-205ENST00000447654 PDCD10Q9BUL8 212 aa18.18■□□□□ 0.5
HMGA1-205ENST00000447654 NTMT1Q9BV86 223 aa18.18■□□□□ 0.5
HMGA1-205ENST00000447654 ENAMQ9NRM1 1142 aa18.18■□□□□ 0.5
HMGA1-205ENST00000447654 MARCH5Q9NX47 278 aa18.18■□□□□ 0.5
HMGA1-205ENST00000447654 REV1Q9UBZ9 1251 aa18.18■□□□□ 0.5
HMGA1-205ENST00000447654 CBLCQ9ULV8 474 aa18.18■□□□□ 0.5
HMGA1-205ENST00000447654 PLXNA3P51805 1871 aa18.18■□□□□ 0.5
HMGA1-205ENST00000447654 SDC3O75056 442 aa18.17■□□□□ 0.5
HMGA1-205ENST00000447654 RP2O75695 350 aa18.17■□□□□ 0.5
HMGA1-205ENST00000447654 PEX11BO96011 259 aa18.17■□□□□ 0.5
HMGA1-205ENST00000447654 HNF1BP35680 557 aa18.17■□□□□ 0.5
HMGA1-205ENST00000447654 HSD17B2P37059 387 aa18.17■□□□□ 0.5
HMGA1-205ENST00000447654 RFC3P40938 356 aa18.17■□□□□ 0.5
HMGA1-205ENST00000447654 PSMD4P55036 377 aaKnown RBP18.17■□□□□ 0.5
HMGA1-205ENST00000447654 EFEMP1Q12805 493 aa18.17■□□□□ 0.5
HMGA1-205ENST00000447654 ILKQ13418 452 aa18.17■□□□□ 0.5
HMGA1-205ENST00000447654 MADCAM1Q13477 382 aa18.17■□□□□ 0.5
HMGA1-205ENST00000447654 FGL2Q14314 439 aa18.17■□□□□ 0.5
HMGA1-205ENST00000447654 CTXN3Q4LDR2 81 aa18.17■□□□□ 0.5
HMGA1-205ENST00000447654 C12orf73Q69YU5 71 aa18.17■□□□□ 0.5
HMGA1-205ENST00000447654 C5orf46Q6UWT4 87 aa18.17■□□□□ 0.5
HMGA1-205ENST00000447654 MON1AQ86VX9 555 aa18.17■□□□□ 0.5
HMGA1-205ENST00000447654 RTL3Q8N8U3 475 aaKnown RBP18.17■□□□□ 0.5
HMGA1-205ENST00000447654 ADAMTS19Q8TE59 1207 aa18.17■□□□□ 0.5
HMGA1-205ENST00000447654 POF1BQ8WVV4 589 aa18.17■□□□□ 0.5
HMGA1-205ENST00000447654 PANX1Q96RD7 426 aa18.17■□□□□ 0.5
HMGA1-205ENST00000447654 PIP5K1AQ99755 562 aa18.17■□□□□ 0.5
HMGA1-205ENST00000447654 TRIM62Q9BVG3 475 aa18.17■□□□□ 0.5
HMGA1-205ENST00000447654 CHST8Q9H2A9 424 aa18.17■□□□□ 0.5
HMGA1-205ENST00000447654 ZMYM5Q9UJ78 669 aa18.17■□□□□ 0.5
HMGA1-205ENST00000447654 LOC105369274A0A096LPK9 316 aa18.17■□□□□ 0.5
HMGA1-205ENST00000447654 ADAP00813 363 aa18.17■□□□□ 0.5
HMGA1-205ENST00000447654 S100PP25815 95 aa18.17■□□□□ 0.5
HMGA1-205ENST00000447654 GPR143P51810 404 aa18.17■□□□□ 0.5
HMGA1-205ENST00000447654 MRPL58Q14197 206 aaKnown RBP18.17■□□□□ 0.5
HMGA1-205ENST00000447654 TAS1R1Q7RTX1 841 aa18.17■□□□□ 0.5
HMGA1-205ENST00000447654 OR4N4Q8N0Y3 316 aa18.17■□□□□ 0.5
HMGA1-205ENST00000447654 OR9Q2Q8NGE9 314 aa18.17■□□□□ 0.5
HMGA1-205ENST00000447654 OR1S1Q8NH92 325 aa18.17■□□□□ 0.5
HMGA1-205ENST00000447654 CD200R1Q8TD46 325 aa18.17■□□□□ 0.5
HMGA1-205ENST00000447654 EEF1AKMT1Q8WVE0 214 aa18.17■□□□□ 0.5
HMGA1-205ENST00000447654 TMEM203Q969S6 136 aa18.17■□□□□ 0.5
HMGA1-205ENST00000447654 CDKN2AIPNLQ96HQ2 116 aa18.17■□□□□ 0.5
HMGA1-205ENST00000447654 BBS4Q96RK4 519 aa18.17■□□□□ 0.5
HMGA1-205ENST00000447654 FAM120CQ9NX05 1096 aaKnown RBP18.17■□□□□ 0.5
HMGA1-205ENST00000447654 DPP7Q9UHL4 492 aa18.17■□□□□ 0.5
HMGA1-205ENST00000447654 PPT2Q9UMR5 302 aa18.17■□□□□ 0.5
HMGA1-205ENST00000447654 ADAM12O43184 909 aa18.16■□□□□ 0.5
HMGA1-205ENST00000447654 NFYAP23511 347 aaPredicted RBP18.16■□□□□ 0.5
HMGA1-205ENST00000447654 CAPZA2P47755 286 aa18.16■□□□□ 0.5
HMGA1-205ENST00000447654 ARHGDIBP52566 201 aa18.16■□□□□ 0.5
HMGA1-205ENST00000447654 ZP1P60852 638 aa18.16■□□□□ 0.5
HMGA1-205ENST00000447654 PLD1Q13393 1074 aa18.16■□□□□ 0.5
HMGA1-205ENST00000447654 SMAD2Q15796 467 aaKnown RBP18.16■□□□□ 0.5
HMGA1-205ENST00000447654 MS4A13Q5J8X5 152 aa18.16■□□□□ 0.5
HMGA1-205ENST00000447654 ATAT1Q5SQI0 421 aa18.16■□□□□ 0.5
HMGA1-205ENST00000447654 HES5Q5TA89 166 aa18.16■□□□□ 0.5
HMGA1-205ENST00000447654 TRMT11Q7Z4G4 463 aaKnown RBP18.16■□□□□ 0.5
HMGA1-205ENST00000447654 SLITRK4Q8IW52 837 aa18.16■□□□□ 0.5
HMGA1-205ENST00000447654 SPICQ8N5J4 248 aa18.16■□□□□ 0.5
HMGA1-205ENST00000447654 SYT14Q8NB59 555 aa18.16■□□□□ 0.5
HMGA1-205ENST00000447654 DMBX1Q8NFW5 382 aa18.16■□□□□ 0.5
HMGA1-205ENST00000447654 COQ8AQ8NI60 647 aa18.16■□□□□ 0.5
HMGA1-205ENST00000447654 SFT2D1Q8WV19 159 aa18.16■□□□□ 0.5
HMGA1-205ENST00000447654 FUBP3Q96I24 572 aaKnown RBP eCLIP18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms