RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 ASF1AQ9Y294 204 aa18.02■□□□□ 0.47
SDCBP-204ENST00000447182 YARS2Q9Y2Z4 477 aaKnown RBP18.02■□□□□ 0.47
SDCBP-204ENST00000447182 EXOSC1Q9Y3B2 195 aaKnown RBP18.02■□□□□ 0.47
SDCBP-204ENST00000447182 ALX3O95076 343 aa18.01■□□□□ 0.47
SDCBP-204ENST00000447182 GAAP10253 952 aa18.01■□□□□ 0.47
SDCBP-204ENST00000447182 PPP2R1BP30154 601 aa18.01■□□□□ 0.47
SDCBP-204ENST00000447182 CHRNEQ04844 493 aa18.01■□□□□ 0.47
SDCBP-204ENST00000447182 CRTC2Q53ET0 693 aaPredicted RBP18.01■□□□□ 0.47
SDCBP-204ENST00000447182 OR2G6Q5TZ20 316 aa18.01■□□□□ 0.47
SDCBP-204ENST00000447182 METAP1DQ6UB28 335 aaPredicted RBP18.01■□□□□ 0.47
SDCBP-204ENST00000447182 SLC36A4Q6YBV0 504 aa18.01■□□□□ 0.47
SDCBP-204ENST00000447182 TMCO2Q7Z6W1 182 aaPredicted RBP18.01■□□□□ 0.47
SDCBP-204ENST00000447182 NUDT13Q86X67 352 aa18.01■□□□□ 0.47
SDCBP-204ENST00000447182 OR52P1PQ8NH57 321 aa18.01■□□□□ 0.47
SDCBP-204ENST00000447182 NUS1Q96E22 293 aa18.01■□□□□ 0.47
SDCBP-204ENST00000447182 RNFT2Q96EX2 444 aa18.01■□□□□ 0.47
SDCBP-204ENST00000447182 SLC35G5Q96KT7 338 aa18.01■□□□□ 0.47
SDCBP-204ENST00000447182 SPATA5L1Q9BVQ7 753 aa18.01■□□□□ 0.47
SDCBP-204ENST00000447182 ACAT2Q9BWD1 397 aa18.01■□□□□ 0.47
SDCBP-204ENST00000447182 BCL2L10Q9HD36 194 aa18.01■□□□□ 0.47
SDCBP-204ENST00000447182 TDP1Q9NUW8 608 aa18.01■□□□□ 0.47
SDCBP-204ENST00000447182 MARK1Q9P0L2 795 aa18.01■□□□□ 0.47
SDCBP-204ENST00000447182 ADAM29Q9UKF5 820 aa18.01■□□□□ 0.47
SDCBP-204ENST00000447182 TRIM3O75382 744 aaPredicted RBP18.01■□□□□ 0.47
SDCBP-204ENST00000447182 NR2F1P10589 423 aa18.01■□□□□ 0.47
SDCBP-204ENST00000447182 DDX6P26196 483 aaKnown RBP eCLIP18.01■□□□□ 0.474e-7■□□□□ 9.8
SDCBP-204ENST00000447182 PTBP1P26599 531 aaKnown RBP eCLIP18.01■□□□□ 0.47
SDCBP-204ENST00000447182 GPR1P46091 355 aa18.01■□□□□ 0.47
SDCBP-204ENST00000447182 ARHGAP19Q14CB8 494 aa18.01■□□□□ 0.47
SDCBP-204ENST00000447182 MINDY4Q4G0A6 757 aa18.01■□□□□ 0.47
SDCBP-204ENST00000447182 TIGD3Q6B0B8 471 aa18.01■□□□□ 0.47
SDCBP-204ENST00000447182 RAET1GQ6H3X3 334 aa18.01■□□□□ 0.47
SDCBP-204ENST00000447182 PDZD3Q86UT5 571 aa18.01■□□□□ 0.47
SDCBP-204ENST00000447182 KIF18BQ86Y91 864 aa18.01■□□□□ 0.47
SDCBP-204ENST00000447182 DCUN1D3Q8IWE4 304 aa18.01■□□□□ 0.47
SDCBP-204ENST00000447182 ATP6V1C2Q8NEY4 427 aa18.01■□□□□ 0.47
SDCBP-204ENST00000447182 OR5AR1Q8NGP9 310 aa18.01■□□□□ 0.47
SDCBP-204ENST00000447182 BBS10Q8TAM1 723 aa18.01■□□□□ 0.47
SDCBP-204ENST00000447182 ENKURQ8TC29 256 aa18.01■□□□□ 0.47
SDCBP-204ENST00000447182 ARHGAP9Q9BRR9 750 aa18.01■□□□□ 0.47
SDCBP-204ENST00000447182 PPP1R3EQ9H7J1 279 aa18.01■□□□□ 0.47
SDCBP-204ENST00000447182 KLHL21Q9UJP4 597 aa18.01■□□□□ 0.47
SDCBP-204ENST00000447182 PLAGL1Q9UM63 463 aa18.01■□□□□ 0.47
SDCBP-204ENST00000447182 NDRG2Q9UN36 371 aaKnown RBP18.01■□□□□ 0.47
SDCBP-204ENST00000447182 TRDV1A0A1B0GX56 115 aa18■□□□□ 0.47
SDCBP-204ENST00000447182 KPNA3O00505 521 aaPredicted RBP18■□□□□ 0.47
SDCBP-204ENST00000447182 PROM1O43490 865 aa18■□□□□ 0.47
SDCBP-204ENST00000447182 EPPINO95925 133 aa18■□□□□ 0.47
SDCBP-204ENST00000447182 CA8P35219 290 aa18■□□□□ 0.47
SDCBP-204ENST00000447182 MTNR1AP48039 350 aa18■□□□□ 0.47
SDCBP-204ENST00000447182 FAM83HQ6ZRV2 1179 aaPredicted RBP18■□□□□ 0.47
SDCBP-204ENST00000447182 C11orf96Q7Z7L8 435 aa18■□□□□ 0.47
SDCBP-204ENST00000447182 C2orf73Q8N5S3 287 aaPredicted RBP18■□□□□ 0.47
SDCBP-204ENST00000447182 CAMKK1Q8N5S9 505 aa18■□□□□ 0.47
SDCBP-204ENST00000447182 SYT14Q8NB59 555 aa18■□□□□ 0.47
SDCBP-204ENST00000447182 ZNF485Q8NCK3 441 aa18■□□□□ 0.47
SDCBP-204ENST00000447182 KREMEN2Q8NCW0 462 aa18■□□□□ 0.47
SDCBP-204ENST00000447182 OR6T1Q8NGN1 323 aa18■□□□□ 0.47
SDCBP-204ENST00000447182 XAGE5Q8WWM1 108 aa18■□□□□ 0.47
SDCBP-204ENST00000447182 GATAD2BQ8WXI9 593 aa18■□□□□ 0.47
SDCBP-204ENST00000447182 VWCEQ96DN2 955 aa18■□□□□ 0.47
SDCBP-204ENST00000447182 NT5DC2Q9H857 520 aa18■□□□□ 0.47
SDCBP-204ENST00000447182 HCFC1R1Q9NWW0 138 aa18■□□□□ 0.47
SDCBP-204ENST00000447182 TAC3Q9UHF0 121 aa18■□□□□ 0.47
SDCBP-204ENST00000447182 CCL16O15467 120 aa17.99■□□□□ 0.47
SDCBP-204ENST00000447182 VEGFDO43915 354 aa17.99■□□□□ 0.47
SDCBP-204ENST00000447182 TMPRSS11DO60235 418 aa17.99■□□□□ 0.47
SDCBP-204ENST00000447182 CSF2P04141 144 aa17.99■□□□□ 0.47
SDCBP-204ENST00000447182 HOXC5Q00444 222 aa17.99■□□□□ 0.47
SDCBP-204ENST00000447182 REEP5Q00765 189 aa17.99■□□□□ 0.47
SDCBP-204ENST00000447182 FABP5Q01469 135 aa17.99■□□□□ 0.47
SDCBP-204ENST00000447182 DPTQ07507 201 aa17.99■□□□□ 0.47
SDCBP-204ENST00000447182 DMPKQ09013 629 aa17.99■□□□□ 0.47
SDCBP-204ENST00000447182 Q5BKY6 102 aa17.99■□□□□ 0.47
SDCBP-204ENST00000447182 SLC27A4Q6P1M0 643 aa17.99■□□□□ 0.47
SDCBP-204ENST00000447182 DUSP18Q8NEJ0 188 aa17.99■□□□□ 0.47
SDCBP-204ENST00000447182 OR5D16Q8NGK9 328 aa17.99■□□□□ 0.47
SDCBP-204ENST00000447182 TRIM63Q969Q1 353 aa17.99■□□□□ 0.47
SDCBP-204ENST00000447182 RGMAQ96B86 450 aa17.99■□□□□ 0.47
SDCBP-204ENST00000447182 TCEAL4Q96EI5 215 aa17.99■□□□□ 0.47
SDCBP-204ENST00000447182 TM9SF2Q99805 663 aa17.99■□□□□ 0.47
SDCBP-204ENST00000447182 COQ7Q99807 217 aa17.99■□□□□ 0.47
SDCBP-204ENST00000447182 PLA2G12AQ9BZM1 189 aa17.99■□□□□ 0.47
SDCBP-204ENST00000447182 PITHD1Q9GZP4 211 aaPredicted RBP17.99■□□□□ 0.47
SDCBP-204ENST00000447182 RERGLQ9H628 205 aa17.99■□□□□ 0.47
SDCBP-204ENST00000447182 TEX10Q9NXF1 929 aaPredicted RBP17.99■□□□□ 0.47
SDCBP-204ENST00000447182 PCDHGB7Q9Y5F8 929 aa17.99■□□□□ 0.47
SDCBP-204ENST00000447182 KDM4EB2RXH2 506 aaPredicted RBP17.99■□□□□ 0.47
SDCBP-204ENST00000447182 CHRM5P08912 532 aaPredicted RBP17.99■□□□□ 0.47
SDCBP-204ENST00000447182 LIMS3P0CW19 117 aa17.99■□□□□ 0.47
SDCBP-204ENST00000447182 LIMS4P0CW20 117 aa17.99■□□□□ 0.47
SDCBP-204ENST00000447182 PRKCAP17252 672 aa17.99■□□□□ 0.47
SDCBP-204ENST00000447182 PPM1AP35813 382 aa17.99■□□□□ 0.47
SDCBP-204ENST00000447182 MAP2K3P46734 347 aa17.99■□□□□ 0.47
SDCBP-204ENST00000447182 CCR8P51685 355 aa17.99■□□□□ 0.47
SDCBP-204ENST00000447182 LSM11P83369 360 aaKnown RBP eCLIP17.99■□□□□ 0.47
SDCBP-204ENST00000447182 RPA4Q13156 261 aa17.99■□□□□ 0.47
SDCBP-204ENST00000447182 RIN1Q13671 783 aa17.99■□□□□ 0.47
SDCBP-204ENST00000447182 GPR19Q15760 415 aa17.99■□□□□ 0.47
SDCBP-204ENST00000447182 ZNF77Q15935 545 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms