RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 CTSBP07858 339 aa16.39■□□□□ 0.21
SMC6-206ENST00000446852 TTKP33981 857 aa16.39■□□□□ 0.21
SMC6-206ENST00000446852 SOX18P35713 384 aa16.39■□□□□ 0.21
SMC6-206ENST00000446852 ANXA11P50995 505 aaKnown RBP16.39■□□□□ 0.21
SMC6-206ENST00000446852 VSX2P58304 361 aaPredicted RBP16.39■□□□□ 0.21
SMC6-206ENST00000446852 COLEC12Q5KU26 742 aa16.39■□□□□ 0.21
SMC6-206ENST00000446852 C6orf132Q5T0Z8 1188 aa16.39■□□□□ 0.21
SMC6-206ENST00000446852 GTF2IRD2BQ6EKJ0 949 aa16.39■□□□□ 0.21
SMC6-206ENST00000446852 GTF2IRD2Q86UP8 949 aa16.39■□□□□ 0.21
SMC6-206ENST00000446852 OR4K14Q8NGD5 310 aa16.39■□□□□ 0.21
SMC6-206ENST00000446852 OR5T3Q8NGG3 340 aa16.39■□□□□ 0.21
SMC6-206ENST00000446852 FAM174AQ8TBP5 190 aa16.39■□□□□ 0.21
SMC6-206ENST00000446852 GTPBP3Q969Y2 492 aaKnown RBP16.39■□□□□ 0.21
SMC6-206ENST00000446852 C12orf43Q96C57 262 aaKnown RBP16.39■□□□□ 0.21
SMC6-206ENST00000446852 NODALQ96S42 347 aa16.39■□□□□ 0.21
SMC6-206ENST00000446852 LHPPQ9H008 270 aa16.39■□□□□ 0.21
SMC6-206ENST00000446852 VCX3AQ9NNX9 186 aa16.39■□□□□ 0.21
SMC6-206ENST00000446852 TRMUO75648 421 aaKnown RBP16.39■□□□□ 0.21
SMC6-206ENST00000446852 SEC14L2O76054 403 aa16.39■□□□□ 0.21
SMC6-206ENST00000446852 ZNF10P21506 573 aaPredicted RBP16.39■□□□□ 0.21
SMC6-206ENST00000446852 DCKP27707 260 aa16.39■□□□□ 0.21
SMC6-206ENST00000446852 CD38P28907 300 aa16.39■□□□□ 0.21
SMC6-206ENST00000446852 KRT20P35900 424 aa16.39■□□□□ 0.21
SMC6-206ENST00000446852 GGT2P36268 569 aa16.39■□□□□ 0.21
SMC6-206ENST00000446852 NUP107P57740 925 aa16.39■□□□□ 0.21
SMC6-206ENST00000446852 CXCR4P61073 352 aa16.39■□□□□ 0.21
SMC6-206ENST00000446852 SLC35A2P78381 396 aa16.39■□□□□ 0.21
SMC6-206ENST00000446852 DEFB110Q30KQ9 67 aa16.39■□□□□ 0.21
SMC6-206ENST00000446852 GPAT3Q53EU6 434 aa16.39■□□□□ 0.21
SMC6-206ENST00000446852 RBM12BQ8IXT5 1001 aaKnown RBP16.39■□□□□ 0.21
SMC6-206ENST00000446852 TAGAPQ8N103 731 aa16.39■□□□□ 0.21
SMC6-206ENST00000446852 CSNK1A1LQ8N752 337 aa16.39■□□□□ 0.21
SMC6-206ENST00000446852 AQP11Q8NBQ7 271 aa16.39■□□□□ 0.21
SMC6-206ENST00000446852 TMEM52Q8NDY8 209 aa16.39■□□□□ 0.21
SMC6-206ENST00000446852 DHRS1Q96LJ7 313 aa16.39■□□□□ 0.21
SMC6-206ENST00000446852 RNF6Q9Y252 685 aa16.39■□□□□ 0.21
SMC6-206ENST00000446852 ZNF701M0R085 212 aaPredicted RBP16.38■□□□□ 0.21
SMC6-206ENST00000446852 GASTP01350 101 aa16.38■□□□□ 0.21
SMC6-206ENST00000446852 NME1P15531 152 aaKnown RBP16.38■□□□□ 0.21
SMC6-206ENST00000446852 PCMT1P22061 227 aa16.38■□□□□ 0.21
SMC6-206ENST00000446852 ROR2Q01974 943 aaKnown RBP16.38■□□□□ 0.21
SMC6-206ENST00000446852 ID2Q02363 134 aa16.38■□□□□ 0.21
SMC6-206ENST00000446852 SEC23BQ15437 767 aa16.38■□□□□ 0.21
SMC6-206ENST00000446852 PROX2Q3B8N5 592 aa16.38■□□□□ 0.21
SMC6-206ENST00000446852 CHRDQ9H2X0 955 aa16.38■□□□□ 0.21
SMC6-206ENST00000446852 DUSP21Q9H596 190 aa16.38■□□□□ 0.21
SMC6-206ENST00000446852 LYRM4Q9HD34 91 aa16.38■□□□□ 0.21
SMC6-206ENST00000446852 MS4A12Q9NXJ0 267 aa16.38■□□□□ 0.21
SMC6-206ENST00000446852 ERVK-18Q9QC07 812 aa16.38■□□□□ 0.21
SMC6-206ENST00000446852 ACAD8Q9UKU7 415 aa16.38■□□□□ 0.21
SMC6-206ENST00000446852 MRPS17Q9Y2R5 130 aaKnown RBP16.38■□□□□ 0.21
SMC6-206ENST00000446852 PCDH15Q96QU1 1955 aa16.38■□□□□ 0.21
SMC6-206ENST00000446852 ARRDC5A6NEK1 342 aa16.38■□□□□ 0.21
SMC6-206ENST00000446852 ELAVL4P26378 380 aaKnown RBP16.38■□□□□ 0.21
SMC6-206ENST00000446852 TLX1P31314 330 aaPredicted RBP16.38■□□□□ 0.21
SMC6-206ENST00000446852 FGD3Q5JSP0 725 aa16.38■□□□□ 0.21
SMC6-206ENST00000446852 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.38■□□□□ 0.21
SMC6-206ENST00000446852 BTBD2Q9BX70 525 aa16.38■□□□□ 0.21
SMC6-206ENST00000446852 SLC38A1Q9H2H9 487 aa16.38■□□□□ 0.21
SMC6-206ENST00000446852 SEMA6CQ9H3T2 930 aa16.38■□□□□ 0.21
SMC6-206ENST00000446852 NTMQ9P121 344 aa16.38■□□□□ 0.21
SMC6-206ENST00000446852 A0A0G2JPF8 293 aa16.37■□□□□ 0.21
SMC6-206ENST00000446852 HNRNPCL2B2RXH8 293 aa16.37■□□□□ 0.21
SMC6-206ENST00000446852 HNRNPCL3B7ZW38 293 aa16.37■□□□□ 0.21
SMC6-206ENST00000446852 H3BMQ9 156 aa16.37■□□□□ 0.21
SMC6-206ENST00000446852 ASNA1O43681 348 aa16.37■□□□□ 0.21
SMC6-206ENST00000446852 GALR3O60755 368 aaPredicted RBP16.37■□□□□ 0.21
SMC6-206ENST00000446852 HNRNPCL4P0DMR1 293 aa16.37■□□□□ 0.21
SMC6-206ENST00000446852 CPMP14384 443 aa16.37■□□□□ 0.21
SMC6-206ENST00000446852 STARD6P59095 220 aa16.37■□□□□ 0.21
SMC6-206ENST00000446852 GNA13Q14344 377 aa16.37■□□□□ 0.21
SMC6-206ENST00000446852 USP53Q70EK8 1073 aa16.37■□□□□ 0.21
SMC6-206ENST00000446852 ZNF655Q8N720 491 aaPredicted RBP16.37■□□□□ 0.21
SMC6-206ENST00000446852 FAM81AQ8TBF8 368 aa16.37■□□□□ 0.21
SMC6-206ENST00000446852 COG8Q96MW5 612 aa16.37■□□□□ 0.21
SMC6-206ENST00000446852 DOK1Q99704 481 aa16.37■□□□□ 0.21
SMC6-206ENST00000446852 ACTRT3Q9BYD9 372 aa16.37■□□□□ 0.21
SMC6-206ENST00000446852 CCDC90BQ9GZT6 254 aa16.37■□□□□ 0.21
SMC6-206ENST00000446852 ZNF556Q9HAH1 456 aa16.37■□□□□ 0.21
SMC6-206ENST00000446852 A4GNTQ9UNA3 340 aa16.37■□□□□ 0.21
SMC6-206ENST00000446852 SNX5Q9Y5X3 404 aa16.37■□□□□ 0.21
SMC6-206ENST00000446852 DSPPQ9NZW4 1301 aa16.37■□□□□ 0.21
SMC6-206ENST00000446852 LDB3O75112 727 aa16.37■□□□□ 0.21
SMC6-206ENST00000446852 ZIC2O95409 532 aaPredicted RBP16.37■□□□□ 0.21
SMC6-206ENST00000446852 SHC2P98077 582 aa16.37■□□□□ 0.21
SMC6-206ENST00000446852 PIN1Q13526 163 aaPredicted RBP16.37■□□□□ 0.21
SMC6-206ENST00000446852 LEXMQ3ZCV2 418 aa16.37■□□□□ 0.21
SMC6-206ENST00000446852 MANEAQ5SRI9 462 aa16.37■□□□□ 0.21
SMC6-206ENST00000446852 MFSD12Q6NUT3 480 aa16.37■□□□□ 0.21
SMC6-206ENST00000446852 ARMC6Q6NXE6 501 aa16.37■□□□□ 0.21
SMC6-206ENST00000446852 KLHL17Q6TDP4 642 aa16.37■□□□□ 0.21
SMC6-206ENST00000446852 ERI1Q8IV48 349 aaKnown RBP16.37■□□□□ 0.21
SMC6-206ENST00000446852 NLGN4XQ8N0W4 816 aa16.37■□□□□ 0.21
SMC6-206ENST00000446852 OR2L13Q8N349 312 aa16.37■□□□□ 0.21
SMC6-206ENST00000446852 PARP8Q8N3A8 854 aa16.37■□□□□ 0.21
SMC6-206ENST00000446852 ARL14Q8N4G2 192 aa16.37■□□□□ 0.21
SMC6-206ENST00000446852 SLC16A11Q8NCK7 471 aa16.37■□□□□ 0.21
SMC6-206ENST00000446852 ZNF420Q8TAQ5 688 aaPredicted RBP16.37■□□□□ 0.21
SMC6-206ENST00000446852 ZG16BQ96DA0 208 aa16.37■□□□□ 0.21
SMC6-206ENST00000446852 MS4A4EQ96PG1 132 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms