RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 C1orf61Q13536 156 aa8.14□□□□□ -1.11
PTPN3-204ENST00000446349 ZNF169Q14929 603 aaPredicted RBP8.14□□□□□ -1.11
PTPN3-204ENST00000446349 MARCH9Q86YJ5 346 aa8.14□□□□□ -1.11
PTPN3-204ENST00000446349 OR8S1Q8NH09 359 aa8.14□□□□□ -1.11
PTPN3-204ENST00000446349 RFT1Q96AA3 541 aa8.14□□□□□ -1.11
PTPN3-204ENST00000446349 TMEM41AQ96HV5 264 aa8.14□□□□□ -1.11
PTPN3-204ENST00000446349 MYADMQ96S97 322 aa8.14□□□□□ -1.11
PTPN3-204ENST00000446349 DNTTIP1Q9H147 329 aa8.14□□□□□ -1.11
PTPN3-204ENST00000446349 PTRH2Q9Y3E5 179 aaKnown RBP8.14□□□□□ -1.11
PTPN3-204ENST00000446349 E7ENX8 843 aa8.14□□□□□ -1.11
PTPN3-204ENST00000446349 ERP29P30040 261 aaKnown RBP8.14□□□□□ -1.11
PTPN3-204ENST00000446349 EPHA4P54764 986 aa8.14□□□□□ -1.11
PTPN3-204ENST00000446349 JAG1P78504 1218 aa8.14□□□□□ -1.11
PTPN3-204ENST00000446349 PTGR1Q14914 329 aa8.14□□□□□ -1.11
PTPN3-204ENST00000446349 ZNF704Q6ZNC4 412 aaPredicted RBP8.14□□□□□ -1.11
PTPN3-204ENST00000446349 MS4A15Q8N5U1 240 aa8.14□□□□□ -1.11
PTPN3-204ENST00000446349 PEX11GQ96HA9 241 aa8.14□□□□□ -1.11
PTPN3-204ENST00000446349 TPSD1Q9BZJ3 242 aa8.14□□□□□ -1.11
PTPN3-204ENST00000446349 TRNAU1APQ9NX07 287 aaKnown RBP8.14□□□□□ -1.11
PTPN3-204ENST00000446349 GIN1Q9NXP7 522 aa8.14□□□□□ -1.11
PTPN3-204ENST00000446349 TAS2R10Q9NYW0 307 aa8.14□□□□□ -1.11
PTPN3-204ENST00000446349 CDC40O60508 579 aaKnown RBP eCLIP8.13□□□□□ -1.11
PTPN3-204ENST00000446349 GALR3O60755 368 aaPredicted RBP8.13□□□□□ -1.11
PTPN3-204ENST00000446349 ACTL6BO94805 426 aa8.13□□□□□ -1.11
PTPN3-204ENST00000446349 C8orf89P0DMQ9 161 aa8.13□□□□□ -1.11
PTPN3-204ENST00000446349 F3P13726 295 aa8.13□□□□□ -1.11
PTPN3-204ENST00000446349 RACK1P63244 317 aaKnown RBP8.13□□□□□ -1.11
PTPN3-204ENST00000446349 DCAF12L1Q5VU92 463 aa8.13□□□□□ -1.11
PTPN3-204ENST00000446349 ERMP1Q7Z2K6 904 aa8.13□□□□□ -1.11
PTPN3-204ENST00000446349 UBE2Q1Q7Z7E8 422 aa8.13□□□□□ -1.11
PTPN3-204ENST00000446349 OR6N2Q8NGY6 317 aa8.13□□□□□ -1.11
PTPN3-204ENST00000446349 MUCL1Q96DR8 90 aa8.13□□□□□ -1.11
PTPN3-204ENST00000446349 MKLN1Q9UL63 735 aa8.13□□□□□ -1.11
PTPN3-204ENST00000446349 PSMD9O00233 223 aa8.13□□□□□ -1.11
PTPN3-204ENST00000446349 FMO6PO60774 539 aa8.13□□□□□ -1.11
PTPN3-204ENST00000446349 ABOP16442 354 aa8.13□□□□□ -1.11
PTPN3-204ENST00000446349 HYAL2Q12891 473 aa8.13□□□□□ -1.11
PTPN3-204ENST00000446349 FAM205BPQ63HN1 556 aa8.13□□□□□ -1.11
PTPN3-204ENST00000446349 USP53Q70EK8 1073 aa8.13□□□□□ -1.11
PTPN3-204ENST00000446349 SSX6Q7RTT6 188 aa8.13□□□□□ -1.11
PTPN3-204ENST00000446349 TOMM5Q8N4H5 51 aa8.13□□□□□ -1.11
PTPN3-204ENST00000446349 MINDY1Q8N5J2 469 aa8.13□□□□□ -1.11
PTPN3-204ENST00000446349 OR8J1Q8NGP2 316 aa8.13□□□□□ -1.11
PTPN3-204ENST00000446349 TRUB1Q8WWH5 349 aaKnown RBP8.13□□□□□ -1.11
PTPN3-204ENST00000446349 TMBIM1Q969X1 311 aa8.13□□□□□ -1.11
PTPN3-204ENST00000446349 CNN2Q99439 309 aaKnown RBP8.13□□□□□ -1.11
PTPN3-204ENST00000446349 POTEKPQ9BYX7 375 aa8.13□□□□□ -1.11
PTPN3-204ENST00000446349 OR51I1Q9H343 314 aa8.13□□□□□ -1.11
PTPN3-204ENST00000446349 A0A0U1RQJ8 604 aa8.13□□□□□ -1.11
PTPN3-204ENST00000446349 PCDH17O14917 1159 aa8.13□□□□□ -1.11
PTPN3-204ENST00000446349 ITGB2P05107 769 aa8.13□□□□□ -1.11
PTPN3-204ENST00000446349 GNAO1P09471 354 aa8.13□□□□□ -1.11
PTPN3-204ENST00000446349 SLC2A2P11168 524 aaPredicted RBP8.13□□□□□ -1.11
PTPN3-204ENST00000446349 GALK1P51570 392 aa8.13□□□□□ -1.11
PTPN3-204ENST00000446349 ARF5P84085 180 aa8.13□□□□□ -1.11
PTPN3-204ENST00000446349 PRKCDQ05655 676 aa8.13□□□□□ -1.11
PTPN3-204ENST00000446349 GPR149Q86SP6 731 aa8.13□□□□□ -1.11
PTPN3-204ENST00000446349 OR9A2Q8NGT5 310 aa8.13□□□□□ -1.11
PTPN3-204ENST00000446349 HHIPQ96QV1 700 aa8.13□□□□□ -1.11
PTPN3-204ENST00000446349 PTTG2Q9NZH5 202 aa8.13□□□□□ -1.11
PTPN3-204ENST00000446349 BTNL2Q9UIR0 455 aa8.13□□□□□ -1.11
PTPN3-204ENST00000446349 TCRBV7S3A2A0A539 114 aa8.13□□□□□ -1.11
PTPN3-204ENST00000446349 A6NLC8 198 aa8.13□□□□□ -1.11
PTPN3-204ENST00000446349 GRXCR1A8MXD5 290 aa8.13□□□□□ -1.11
PTPN3-204ENST00000446349 AQP9O43315 295 aa8.13□□□□□ -1.11
PTPN3-204ENST00000446349 TLX2O43763 284 aaPredicted RBP8.13□□□□□ -1.11
PTPN3-204ENST00000446349 IFNGR1P15260 489 aa8.13□□□□□ -1.11
PTPN3-204ENST00000446349 VWA5B2Q8N398 1253 aa8.13□□□□□ -1.11
PTPN3-204ENST00000446349 ADAMTS16Q8TE57 1224 aa8.13□□□□□ -1.11
PTPN3-204ENST00000446349 PINK1Q9BXM7 581 aa8.13□□□□□ -1.11
PTPN3-204ENST00000446349 hCG_1809904A0A1W2PP81 198 aa8.13□□□□□ -1.11
PTPN3-204ENST00000446349 A0A1W2PPE2 198 aa8.13□□□□□ -1.11
PTPN3-204ENST00000446349 A0A1W2PR64 198 aa8.13□□□□□ -1.11
PTPN3-204ENST00000446349 A0A1W2PRV1 198 aa8.13□□□□□ -1.11
PTPN3-204ENST00000446349 EIF1AYO14602 144 aaKnown RBP8.13□□□□□ -1.11
PTPN3-204ENST00000446349 VILLO15195 856 aa8.13□□□□□ -1.11
PTPN3-204ENST00000446349 BPNT1O95861 308 aa8.13□□□□□ -1.11
PTPN3-204ENST00000446349 S100A1P23297 94 aa8.13□□□□□ -1.11
PTPN3-204ENST00000446349 GDF5P43026 501 aa8.13□□□□□ -1.11
PTPN3-204ENST00000446349 EIF1AXP47813 144 aaKnown RBP8.13□□□□□ -1.11
PTPN3-204ENST00000446349 VMACQ2NL98 169 aa8.13□□□□□ -1.11
PTPN3-204ENST00000446349 BCL2L15Q5TBC7 163 aa8.13□□□□□ -1.11
PTPN3-204ENST00000446349 LPCAT4Q643R3 524 aa8.13□□□□□ -1.11
PTPN3-204ENST00000446349 GPR139Q6DWJ6 353 aa8.13□□□□□ -1.11
PTPN3-204ENST00000446349 RSPO2Q6UXX9 243 aaPredicted RBP8.13□□□□□ -1.11
PTPN3-204ENST00000446349 TRIM74Q86UV6 250 aa8.13□□□□□ -1.11
PTPN3-204ENST00000446349 LRRN4CLQ8ND94 238 aa8.13□□□□□ -1.11
PTPN3-204ENST00000446349 PITX2Q99697 317 aa8.13□□□□□ -1.11
PTPN3-204ENST00000446349 AKAP11Q9UKA4 1901 aa8.13□□□□□ -1.11
PTPN3-204ENST00000446349 PLSCR5A0PG75 271 aa8.13□□□□□ -1.11
PTPN3-204ENST00000446349 CXorf49A8MYA2 514 aaPredicted RBP8.13□□□□□ -1.11
PTPN3-204ENST00000446349 H3BQ06 376 aaPredicted RBP8.13□□□□□ -1.11
PTPN3-204ENST00000446349 EFNA1P20827 205 aaPredicted RBP8.13□□□□□ -1.11
PTPN3-204ENST00000446349 DGKQP52824 942 aa8.13□□□□□ -1.11
PTPN3-204ENST00000446349 TLE3Q04726 772 aa8.13□□□□□ -1.11
PTPN3-204ENST00000446349 EXT1Q16394 746 aa8.13□□□□□ -1.11
PTPN3-204ENST00000446349 HSD17B12Q53GQ0 312 aa8.13□□□□□ -1.11
PTPN3-204ENST00000446349 FCAMRQ8WWV6 532 aa8.13□□□□□ -1.11
PTPN3-204ENST00000446349 ECHDC3Q96DC8 303 aa8.13□□□□□ -1.11
PTPN3-204ENST00000446349 SYT3Q9BQG1 590 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms