RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 A8MT66 165 aa10.79□□□□□ -0.68
TTC28-203ENST00000442232 ACOX3O15254 700 aa10.79□□□□□ -0.68
TTC28-203ENST00000442232 PPM1BO75688 479 aa10.79□□□□□ -0.68
TTC28-203ENST00000442232 PDYNP01213 254 aa10.79□□□□□ -0.68
TTC28-203ENST00000442232 IL2RAP01589 272 aa10.79□□□□□ -0.68
TTC28-203ENST00000442232 KRT6AP02538 564 aa10.79□□□□□ -0.68
TTC28-203ENST00000442232 KRT6BP04259 564 aa10.79□□□□□ -0.68
TTC28-203ENST00000442232 SNRPAP09012 282 aaKnown RBP10.79□□□□□ -0.68
TTC28-203ENST00000442232 CT62P0C5K7 136 aa10.79□□□□□ -0.68
TTC28-203ENST00000442232 CTAGE8P0CG41 777 aa10.79□□□□□ -0.68
TTC28-203ENST00000442232 CSNK2A2P19784 350 aaPredicted RBP10.79□□□□□ -0.68
TTC28-203ENST00000442232 BMP5P22003 454 aa10.79□□□□□ -0.68
TTC28-203ENST00000442232 GPX3P22352 226 aa10.79□□□□□ -0.68
TTC28-203ENST00000442232 ABCD3P28288 659 aa10.79□□□□□ -0.68
TTC28-203ENST00000442232 HMOX2P30519 316 aa10.79□□□□□ -0.68
TTC28-203ENST00000442232 UQCRC1P31930 480 aa10.79□□□□□ -0.68
TTC28-203ENST00000442232 FEN1P39748 380 aaKnown RBP10.79□□□□□ -0.68
TTC28-203ENST00000442232 KIR2DL3P43628 341 aa10.79□□□□□ -0.68
TTC28-203ENST00000442232 KRT6CP48668 564 aa10.79□□□□□ -0.68
TTC28-203ENST00000442232 ASCL1P50553 236 aa10.79□□□□□ -0.68
TTC28-203ENST00000442232 CDK9P50750 372 aaKnown RBP10.79□□□□□ -0.68
TTC28-203ENST00000442232 TRA2BP62995 288 aaKnown RBP10.79□□□□□ -0.68
TTC28-203ENST00000442232 NNATQ16517 81 aa10.79□□□□□ -0.68
TTC28-203ENST00000442232 ACSF3Q4G176 576 aaPredicted RBP10.79□□□□□ -0.68
TTC28-203ENST00000442232 GLE1Q53GS7 698 aaKnown RBP10.79□□□□□ -0.68
TTC28-203ENST00000442232 BICRALQ6AI39 1079 aa10.79□□□□□ -0.68
TTC28-203ENST00000442232 ARSKQ6UWY0 536 aa10.79□□□□□ -0.68
TTC28-203ENST00000442232 CTAGE4Q8IX94 777 aa10.79□□□□□ -0.68
TTC28-203ENST00000442232 ZNF615Q8N8J6 731 aa10.79□□□□□ -0.68
TTC28-203ENST00000442232 OR1J4Q8NGS1 313 aa10.79□□□□□ -0.68
TTC28-203ENST00000442232 UHMK1Q8TAS1 419 aaKnown RBP10.79□□□□□ -0.68
TTC28-203ENST00000442232 ZNF483Q8TF39 744 aaPredicted RBP10.79□□□□□ -0.68
TTC28-203ENST00000442232 UCN3Q969E3 161 aa10.79□□□□□ -0.68
TTC28-203ENST00000442232 TMEM41AQ96HV5 264 aa10.79□□□□□ -0.68
TTC28-203ENST00000442232 PROK2Q9HC23 129 aa10.79□□□□□ -0.68
TTC28-203ENST00000442232 ZBTB26Q9HCK0 441 aa10.79□□□□□ -0.68
TTC28-203ENST00000442232 GIMAP4Q9NUV9 329 aa10.79□□□□□ -0.68
TTC28-203ENST00000442232 DNAJB12Q9NXW2 375 aaKnown RBP10.79□□□□□ -0.68
TTC28-203ENST00000442232 KLRF1Q9NZS2 232 aa10.79□□□□□ -0.68
TTC28-203ENST00000442232 PRODH2Q9UF12 536 aa10.79□□□□□ -0.68
TTC28-203ENST00000442232 NFU1Q9UMS0 254 aa10.79□□□□□ -0.68
TTC28-203ENST00000442232 STK38LQ9Y2H1 464 aa10.79□□□□□ -0.68
TTC28-203ENST00000442232 CELSR1Q9NYQ6 3014 aa10.79□□□□□ -0.68
TTC28-203ENST00000442232 ANKHD1Q8IWZ3 2542 aaKnown RBP10.78□□□□□ -0.68
TTC28-203ENST00000442232 GNB5O14775 395 aa10.78□□□□□ -0.68
TTC28-203ENST00000442232 BCAS2O75934 225 aaPredicted RBP10.78□□□□□ -0.68
TTC28-203ENST00000442232 EPPINO95925 133 aa10.78□□□□□ -0.68
TTC28-203ENST00000442232 ATP1B1P05026 303 aa10.78□□□□□ -0.68
TTC28-203ENST00000442232 HPNP05981 417 aa10.78□□□□□ -0.68
TTC28-203ENST00000442232 HSD3B1P14060 373 aa10.78□□□□□ -0.68
TTC28-203ENST00000442232 NAGAP17050 411 aa10.78□□□□□ -0.68
TTC28-203ENST00000442232 TSPAN8P19075 237 aa10.78□□□□□ -0.68
TTC28-203ENST00000442232 HSD3B2P26439 372 aa10.78□□□□□ -0.68
TTC28-203ENST00000442232 KRT20P35900 424 aa10.78□□□□□ -0.68
TTC28-203ENST00000442232 CASP3P42574 277 aa10.78□□□□□ -0.68
TTC28-203ENST00000442232 ART1P52961 327 aa10.78□□□□□ -0.68
TTC28-203ENST00000442232 CDH13P55290 713 aa10.78□□□□□ -0.68
TTC28-203ENST00000442232 DCAF7P61962 342 aa10.78□□□□□ -0.68
TTC28-203ENST00000442232 CRYZQ08257 329 aaKnown RBP10.78□□□□□ -0.68
TTC28-203ENST00000442232 MAP4K2Q12851 820 aa10.78□□□□□ -0.68
TTC28-203ENST00000442232 CSTF3Q12996 717 aaKnown RBP10.78□□□□□ -0.68
TTC28-203ENST00000442232 RCAN2Q14206 197 aa10.78□□□□□ -0.68
TTC28-203ENST00000442232 RASA2Q15283 850 aa10.78□□□□□ -0.68
TTC28-203ENST00000442232 ERCC6LQ2NKX8 1250 aa10.78□□□□□ -0.68
TTC28-203ENST00000442232 UBAP2Q5T6F2 1119 aaKnown RBP10.78□□□□□ -0.68
TTC28-203ENST00000442232 FBXW10Q5XX13 1052 aa10.78□□□□□ -0.68
TTC28-203ENST00000442232 SLC30A6Q6NXT4 461 aa10.78□□□□□ -0.68
TTC28-203ENST00000442232 LETMD1Q6P1Q0 360 aa10.78□□□□□ -0.68
TTC28-203ENST00000442232 ANGPTL8Q6UXH0 198 aa10.78□□□□□ -0.68
TTC28-203ENST00000442232 SPNS3Q6ZMD2 512 aa10.78□□□□□ -0.68
TTC28-203ENST00000442232 NUP54Q7Z3B4 507 aa10.78□□□□□ -0.68
TTC28-203ENST00000442232 LIX1LQ8IVB5 337 aa10.78□□□□□ -0.68
TTC28-203ENST00000442232 ZZZ3Q8IYH5 903 aa10.78□□□□□ -0.68
TTC28-203ENST00000442232 SAMD14Q8IZD0 417 aaPredicted RBP10.78□□□□□ -0.68
TTC28-203ENST00000442232 C1orf52Q8N6N3 182 aaKnown RBP10.78□□□□□ -0.68
TTC28-203ENST00000442232 ADCY4Q8NFM4 1077 aa10.78□□□□□ -0.68
TTC28-203ENST00000442232 DCAKDQ8WVC6 231 aa10.78□□□□□ -0.68
TTC28-203ENST00000442232 ADIPOR1Q96A54 375 aa10.78□□□□□ -0.68
TTC28-203ENST00000442232 MTBPQ96DY7 904 aa10.78□□□□□ -0.68
TTC28-203ENST00000442232 OMA1Q96E52 524 aa10.78□□□□□ -0.68
TTC28-203ENST00000442232 LCORQ96JN0 433 aaPredicted RBP10.78□□□□□ -0.68
TTC28-203ENST00000442232 OSBPL11Q9BXB4 747 aa10.78□□□□□ -0.68
TTC28-203ENST00000442232 ITPAQ9BY32 194 aa10.78□□□□□ -0.68
TTC28-203ENST00000442232 POLDIP3Q9BY77 421 aaKnown RBP10.78□□□□□ -0.68
TTC28-203ENST00000442232 NXF5Q9H1B4 397 aaKnown RBP10.78□□□□□ -0.68
TTC28-203ENST00000442232 FARSBQ9NSD9 589 aaKnown RBP10.78□□□□□ -0.68
TTC28-203ENST00000442232 SENP1Q9P0U3 644 aa10.78□□□□□ -0.68
TTC28-203ENST00000442232 VPS29Q9UBQ0 182 aa10.78□□□□□ -0.68
TTC28-203ENST00000442232 FOXD3Q9UJU5 478 aaPredicted RBP10.78□□□□□ -0.68
TTC28-203ENST00000442232 UTS2RQ9UKP6 389 aa10.78□□□□□ -0.68
TTC28-203ENST00000442232 L3MBTL1Q9Y468 752 aa10.78□□□□□ -0.68
TTC28-203ENST00000442232 C2CD3Q4AC94 2353 aa10.78□□□□□ -0.68
TTC28-203ENST00000442232 GNG14A0A1W2PPG7 69 aa10.77□□□□□ -0.69
TTC28-203ENST00000442232 SUPT7LO94864 414 aa10.77□□□□□ -0.69
TTC28-203ENST00000442232 OR4F21O95013 312 aa10.77□□□□□ -0.69
TTC28-203ENST00000442232 ABCB1P08183 1280 aaPredicted RBP10.77□□□□□ -0.69
TTC28-203ENST00000442232 RHOXF2BP0C7M4 288 aa10.77□□□□□ -0.69
TTC28-203ENST00000442232 CLCQ05315 142 aa10.77□□□□□ -0.69
TTC28-203ENST00000442232 SNTA1Q13424 505 aa10.77□□□□□ -0.69
TTC28-203ENST00000442232 EXOSC7Q15024 291 aaKnown RBP10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms