RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 PARP8Q8N3A8 854 aa6.96□□□□□ -1.29
CDC42BPA-208ENST00000442054 SVOPLQ8N434 492 aa6.96□□□□□ -1.29
CDC42BPA-208ENST00000442054 KRTCAP2Q8N6L1 136 aa6.96□□□□□ -1.29
CDC42BPA-208ENST00000442054 CDYL2Q8N8U2 506 aa6.96□□□□□ -1.29
CDC42BPA-208ENST00000442054 PIK3C3Q8NEB9 887 aa6.96□□□□□ -1.29
CDC42BPA-208ENST00000442054 THAP3Q8WTV1 239 aaPredicted RBP6.96□□□□□ -1.29
CDC42BPA-208ENST00000442054 COX4I2Q96KJ9 171 aa6.96□□□□□ -1.29
CDC42BPA-208ENST00000442054 IP6K3Q96PC2 410 aa6.96□□□□□ -1.29
CDC42BPA-208ENST00000442054 PITX2Q99697 317 aa6.96□□□□□ -1.29
CDC42BPA-208ENST00000442054 DCUN1D5Q9BTE7 237 aa6.96□□□□□ -1.29
CDC42BPA-208ENST00000442054 BDH2Q9BUT1 245 aa6.96□□□□□ -1.29
CDC42BPA-208ENST00000442054 TRPS1Q9UHF7 1281 aa6.96□□□□□ -1.29
CDC42BPA-208ENST00000442054 NDRG4Q9ULP0 352 aaKnown RBP6.96□□□□□ -1.29
CDC42BPA-208ENST00000442054 PCDHGA10Q9Y5H3 936 aa6.96□□□□□ -1.29
CDC42BPA-208ENST00000442054 MYO18BQ8IUG5 2567 aa6.96□□□□□ -1.29
CDC42BPA-208ENST00000442054 H0YGG7 62 aa6.96□□□□□ -1.3
CDC42BPA-208ENST00000442054 TOX3O15405 576 aaPredicted RBP6.96□□□□□ -1.3
CDC42BPA-208ENST00000442054 WBP4O75554 376 aaKnown RBP6.96□□□□□ -1.3
CDC42BPA-208ENST00000442054 OPRL1P41146 370 aa6.96□□□□□ -1.3
CDC42BPA-208ENST00000442054 SLC6A12P48065 614 aa6.96□□□□□ -1.3
CDC42BPA-208ENST00000442054 HNMTP50135 292 aa6.96□□□□□ -1.3
CDC42BPA-208ENST00000442054 DAPP51397 102 aa6.96□□□□□ -1.3
CDC42BPA-208ENST00000442054 ARF3P61204 181 aaPredicted RBP6.96□□□□□ -1.3
CDC42BPA-208ENST00000442054 KCNAB2Q13303 367 aa6.96□□□□□ -1.3
CDC42BPA-208ENST00000442054 CDK5R2Q13319 367 aa6.96□□□□□ -1.3
CDC42BPA-208ENST00000442054 SP140Q13342 867 aa6.96□□□□□ -1.3
CDC42BPA-208ENST00000442054 LAPTM5Q13571 262 aa6.96□□□□□ -1.3
CDC42BPA-208ENST00000442054 TOR1AIP1Q5JTV8 583 aa6.96□□□□□ -1.3
CDC42BPA-208ENST00000442054 SYT6Q5T7P8 510 aaPredicted RBP6.96□□□□□ -1.3
CDC42BPA-208ENST00000442054 FAHD1Q6P587 224 aa6.96□□□□□ -1.3
CDC42BPA-208ENST00000442054 PTOV1Q86YD1 416 aa6.96□□□□□ -1.3
CDC42BPA-208ENST00000442054 VRK3Q8IV63 474 aa6.96□□□□□ -1.3
CDC42BPA-208ENST00000442054 JSRP1Q96MG2 331 aaPredicted RBP6.96□□□□□ -1.3
CDC42BPA-208ENST00000442054 BBS4Q96RK4 519 aa6.96□□□□□ -1.3
CDC42BPA-208ENST00000442054 EFCAB11Q9BUY7 163 aa6.96□□□□□ -1.3
CDC42BPA-208ENST00000442054 ACPTQ9BZG2 426 aa6.96□□□□□ -1.3
CDC42BPA-208ENST00000442054 TMEM184CQ9NVA4 438 aa6.96□□□□□ -1.3
CDC42BPA-208ENST00000442054 NXT1Q9UKK6 140 aaKnown RBP6.96□□□□□ -1.3
CDC42BPA-208ENST00000442054 POMT2Q9UKY4 750 aa6.96□□□□□ -1.3
CDC42BPA-208ENST00000442054 SGTAO43765 313 aa6.96□□□□□ -1.3
CDC42BPA-208ENST00000442054 INMTO95050 263 aa6.96□□□□□ -1.3
CDC42BPA-208ENST00000442054 ADRA2AP08913 450 aa6.96□□□□□ -1.3
CDC42BPA-208ENST00000442054 CCDC159P0C7I6 412 aa6.96□□□□□ -1.3
CDC42BPA-208ENST00000442054 HPGDP15428 266 aa6.96□□□□□ -1.3
CDC42BPA-208ENST00000442054 BCAP31P51572 246 aa6.96□□□□□ -1.3
CDC42BPA-208ENST00000442054 RPS18P62269 152 aaKnown RBP6.96□□□□□ -1.3
CDC42BPA-208ENST00000442054 PRDX1Q06830 199 aaKnown RBP6.96□□□□□ -1.3
CDC42BPA-208ENST00000442054 PIGFQ07326 219 aa6.96□□□□□ -1.3
CDC42BPA-208ENST00000442054 BCL2A1Q16548 175 aa6.96□□□□□ -1.3
CDC42BPA-208ENST00000442054 SHQ1Q6PI26 577 aaKnown RBP6.96□□□□□ -1.3
CDC42BPA-208ENST00000442054 PRSS48Q7RTY5 328 aa6.96□□□□□ -1.3
CDC42BPA-208ENST00000442054 ZBTB8BQ8NAP8 495 aaPredicted RBP6.96□□□□□ -1.3
CDC42BPA-208ENST00000442054 GIPC3Q8TF64 312 aa6.96□□□□□ -1.3
CDC42BPA-208ENST00000442054 TESCQ96BS2 214 aa6.96□□□□□ -1.3
CDC42BPA-208ENST00000442054 LINC00615Q96LM1 132 aaPredicted RBP6.96□□□□□ -1.3
CDC42BPA-208ENST00000442054 RNF145Q96MT1 663 aa6.96□□□□□ -1.3
CDC42BPA-208ENST00000442054 RHNO1Q9BSD3 238 aa6.96□□□□□ -1.3
CDC42BPA-208ENST00000442054 CD244Q9BZW8 370 aa6.96□□□□□ -1.3
CDC42BPA-208ENST00000442054 ROGDIQ9GZN7 287 aa6.96□□□□□ -1.3
CDC42BPA-208ENST00000442054 SLIRPQ9GZT3 109 aaKnown RBP6.96□□□□□ -1.3
CDC42BPA-208ENST00000442054 OR52A5Q9H2C5 316 aa6.96□□□□□ -1.3
CDC42BPA-208ENST00000442054 RHBDL2Q9NX52 303 aa6.96□□□□□ -1.3
CDC42BPA-208ENST00000442054 CHCHD3Q9NX63 227 aaKnown RBP6.96□□□□□ -1.3
CDC42BPA-208ENST00000442054 SIRT5Q9NXA8 310 aa6.96□□□□□ -1.3
CDC42BPA-208ENST00000442054 GIN1Q9NXP7 522 aa6.96□□□□□ -1.3
CDC42BPA-208ENST00000442054 ANKMY1Q9P2S6 941 aa6.96□□□□□ -1.3
CDC42BPA-208ENST00000442054 OSGIN1Q9UJX0 560 aa6.96□□□□□ -1.3
CDC42BPA-208ENST00000442054 ENTPD4Q9Y227 616 aa6.96□□□□□ -1.3
CDC42BPA-208ENST00000442054 DLGAP4Q9Y2H0 992 aa6.96□□□□□ -1.3
CDC42BPA-208ENST00000442054 ARHGEF17Q96PE2 2063 aaPredicted RBP6.96□□□□□ -1.3
CDC42BPA-208ENST00000442054 TRANK1O15050 2925 aa6.96□□□□□ -1.3
CDC42BPA-208ENST00000442054 A0A1B0GX78 115 aa6.95□□□□□ -1.3
CDC42BPA-208ENST00000442054 SLC5A10A0PJK1 596 aa6.95□□□□□ -1.3
CDC42BPA-208ENST00000442054 SOD1P00441 154 aa6.95□□□□□ -1.3
CDC42BPA-208ENST00000442054 TGFB1P01137 390 aa6.95□□□□□ -1.3
CDC42BPA-208ENST00000442054 GABRB1P18505 474 aa6.95□□□□□ -1.3
CDC42BPA-208ENST00000442054 CCNA2P20248 432 aa6.95□□□□□ -1.3
CDC42BPA-208ENST00000442054 MC2RQ01718 297 aa6.95□□□□□ -1.3
CDC42BPA-208ENST00000442054 IL18R1Q13478 541 aa6.95□□□□□ -1.3
CDC42BPA-208ENST00000442054 ARHGAP19Q14CB8 494 aa6.95□□□□□ -1.3
CDC42BPA-208ENST00000442054 ATP6AP1LQ52LC2 224 aa6.95□□□□□ -1.3
CDC42BPA-208ENST00000442054 ZCCHC7Q8N3Z6 543 aaKnown RBP6.95□□□□□ -1.3
CDC42BPA-208ENST00000442054 FNDC5Q8NAU1 212 aa6.95□□□□□ -1.3
CDC42BPA-208ENST00000442054 LSM14AQ8ND56 463 aaKnown RBP6.95□□□□□ -1.3
CDC42BPA-208ENST00000442054 C7orf34Q96L11 122 aa6.95□□□□□ -1.3
CDC42BPA-208ENST00000442054 C5orf34Q96MH7 638 aa6.95□□□□□ -1.3
CDC42BPA-208ENST00000442054 FCRL4Q96PJ5 515 aa6.95□□□□□ -1.3
CDC42BPA-208ENST00000442054 SEPHS2Q99611 448 aa6.95□□□□□ -1.3
CDC42BPA-208ENST00000442054 MACROD1Q9BQ69 325 aa6.95□□□□□ -1.3
CDC42BPA-208ENST00000442054 FAIM2Q9BWQ8 316 aa6.95□□□□□ -1.3
CDC42BPA-208ENST00000442054 RSPO3Q9BXY4 272 aaPredicted RBP6.95□□□□□ -1.3
CDC42BPA-208ENST00000442054 GPR83Q9NYM4 423 aa6.95□□□□□ -1.3
CDC42BPA-208ENST00000442054 POLR3HQ9Y535 204 aaPredicted RBP6.95□□□□□ -1.3
CDC42BPA-208ENST00000442054 LOC100130705A0A1B0GUX0 176 aa6.95□□□□□ -1.3
CDC42BPA-208ENST00000442054 SAP18O00422 153 aaKnown RBP6.95□□□□□ -1.3
CDC42BPA-208ENST00000442054 PRMT3O60678 531 aa6.95□□□□□ -1.3
CDC42BPA-208ENST00000442054 SEC22BO75396 215 aa6.95□□□□□ -1.3
CDC42BPA-208ENST00000442054 FKBP9O95302 570 aa6.95□□□□□ -1.3
CDC42BPA-208ENST00000442054 FAM87AP0C7U9 286 aa6.95□□□□□ -1.3
CDC42BPA-208ENST00000442054 ALOX12P18054 663 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms