RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 CDH16O75309 829 aa16.92■□□□□ 0.3
AC004540.1-201ENST00000439120 ATP1B1P05026 303 aa16.92■□□□□ 0.3
AC004540.1-201ENST00000439120 SBK3P0C264 359 aa16.92■□□□□ 0.3
AC004540.1-201ENST00000439120 GPX3P22352 226 aa16.92■□□□□ 0.3
AC004540.1-201ENST00000439120 ABCD3P28288 659 aa16.92■□□□□ 0.3
AC004540.1-201ENST00000439120 HSD17B3P37058 310 aa16.92■□□□□ 0.3
AC004540.1-201ENST00000439120 NNATQ16517 81 aa16.92■□□□□ 0.3
AC004540.1-201ENST00000439120 SLC25A35Q3KQZ1 300 aa16.92■□□□□ 0.3
AC004540.1-201ENST00000439120 BICRALQ6AI39 1079 aa16.92■□□□□ 0.3
AC004540.1-201ENST00000439120 TRMT10CQ7L0Y3 403 aaKnown RBP16.92■□□□□ 0.3
AC004540.1-201ENST00000439120 LCA5Q86VQ0 697 aa16.92■□□□□ 0.3
AC004540.1-201ENST00000439120 IFT20Q8IY31 132 aa16.92■□□□□ 0.3
AC004540.1-201ENST00000439120 ULK2Q8IYT8 1036 aa16.92■□□□□ 0.3
AC004540.1-201ENST00000439120 ADIPOR1Q96A54 375 aa16.92■□□□□ 0.3
AC004540.1-201ENST00000439120 ANGPTL4Q9BY76 406 aa16.92■□□□□ 0.3
AC004540.1-201ENST00000439120 STK38LQ9Y2H1 464 aa16.92■□□□□ 0.3
AC004540.1-201ENST00000439120 PCDHGB3Q9Y5G1 929 aa16.92■□□□□ 0.3
AC004540.1-201ENST00000439120 MANBAO00462 879 aa16.91■□□□□ 0.3
AC004540.1-201ENST00000439120 HSD3B1P14060 373 aa16.91■□□□□ 0.3
AC004540.1-201ENST00000439120 HSD3B2P26439 372 aa16.91■□□□□ 0.3
AC004540.1-201ENST00000439120 ADH7P40394 386 aa16.91■□□□□ 0.3
AC004540.1-201ENST00000439120 TRA2BP62995 288 aaKnown RBP16.91■□□□□ 0.3
AC004540.1-201ENST00000439120 MAP4K2Q12851 820 aa16.91■□□□□ 0.3
AC004540.1-201ENST00000439120 CSTF3Q12996 717 aaKnown RBP16.91■□□□□ 0.3
AC004540.1-201ENST00000439120 DUSP8Q13202 625 aa16.91■□□□□ 0.3
AC004540.1-201ENST00000439120 EXOSC7Q15024 291 aaKnown RBP16.91■□□□□ 0.3
AC004540.1-201ENST00000439120 PRICKLE4Q2TBC4 344 aa16.91■□□□□ 0.3
AC004540.1-201ENST00000439120 ZNF678Q5SXM1 525 aa16.91■□□□□ 0.3
AC004540.1-201ENST00000439120 RIPPLY2Q5TAB7 128 aa16.91■□□□□ 0.3
AC004540.1-201ENST00000439120 CES4AQ5XG92 561 aa16.91■□□□□ 0.3
AC004540.1-201ENST00000439120 FAM111BQ6SJ93 734 aa16.91■□□□□ 0.3
AC004540.1-201ENST00000439120 TIFABQ6ZNK6 161 aa16.91■□□□□ 0.3
AC004540.1-201ENST00000439120 GPRIN3Q6ZVF9 776 aa16.91■□□□□ 0.3
AC004540.1-201ENST00000439120 TMEM200AQ86VY9 491 aa16.91■□□□□ 0.3
AC004540.1-201ENST00000439120 SLC22A9Q8IVM8 553 aa16.91■□□□□ 0.3
AC004540.1-201ENST00000439120 MMP21Q8N119 569 aa16.91■□□□□ 0.3
AC004540.1-201ENST00000439120 TMEM151AQ8N4L1 468 aa16.91■□□□□ 0.3
AC004540.1-201ENST00000439120 CEP112Q8N8E3 955 aa16.91■□□□□ 0.3
AC004540.1-201ENST00000439120 ADCY4Q8NFM4 1077 aa16.91■□□□□ 0.3
AC004540.1-201ENST00000439120 KIF18AQ8NI77 898 aa16.91■□□□□ 0.3
AC004540.1-201ENST00000439120 METTL6Q8TCB7 284 aa16.91■□□□□ 0.3
AC004540.1-201ENST00000439120 TM4SF18Q96CE8 201 aa16.91■□□□□ 0.3
AC004540.1-201ENST00000439120 NXF5Q9H1B4 397 aaKnown RBP16.91■□□□□ 0.3
AC004540.1-201ENST00000439120 MAT2BQ9NZL9 334 aa16.91■□□□□ 0.3
AC004540.1-201ENST00000439120 TMEM216Q9P0N5 145 aa16.91■□□□□ 0.3
AC004540.1-201ENST00000439120 KCNN3Q9UGI6 736 aa16.91■□□□□ 0.3
AC004540.1-201ENST00000439120 CES1P1Q9UKY3 287 aa16.91■□□□□ 0.3
AC004540.1-201ENST00000439120 TACC2O95359 2948 aa16.9■□□□□ 0.3
AC004540.1-201ENST00000439120 INTS1Q8N201 2190 aaKnown RBP16.9■□□□□ 0.3
AC004540.1-201ENST00000439120 GNG14A0A1W2PPG7 69 aa16.9■□□□□ 0.3
AC004540.1-201ENST00000439120 CCDC151A5D8V7 595 aa16.9■□□□□ 0.3
AC004540.1-201ENST00000439120 HSPB2A8KAH6 182 aa16.9■□□□□ 0.3
AC004540.1-201ENST00000439120 ULK1O75385 1050 aa16.9■□□□□ 0.3
AC004540.1-201ENST00000439120 PPM1BO75688 479 aa16.9■□□□□ 0.3
AC004540.1-201ENST00000439120 ATP5F1P24539 256 aaPredicted RBP16.9■□□□□ 0.3
AC004540.1-201ENST00000439120 CASP3P42574 277 aa16.9■□□□□ 0.3
AC004540.1-201ENST00000439120 PLCXD2Q0VAA5 305 aa16.9■□□□□ 0.3
AC004540.1-201ENST00000439120 SF3B4Q15427 424 aaKnown RBP eCLIP16.9■□□□□ 0.3
AC004540.1-201ENST00000439120 HSPB2Q16082 182 aa16.9■□□□□ 0.3
AC004540.1-201ENST00000439120 TCHHL1Q5QJ38 904 aaPredicted RBP16.9■□□□□ 0.3
AC004540.1-201ENST00000439120 PM20D2Q8IYS1 436 aa16.9■□□□□ 0.3
AC004540.1-201ENST00000439120 HSPBAP1Q96EW2 488 aa16.9■□□□□ 0.3
AC004540.1-201ENST00000439120 LRRC46Q96FV0 321 aa16.9■□□□□ 0.3
AC004540.1-201ENST00000439120 LCORQ96JN0 433 aaPredicted RBP16.9■□□□□ 0.3
AC004540.1-201ENST00000439120 GNRHR2Q96P88 292 aa16.9■□□□□ 0.3
AC004540.1-201ENST00000439120 TMEM237Q96Q45 408 aa16.9■□□□□ 0.3
AC004540.1-201ENST00000439120 ZNF382Q96SR6 550 aa16.9■□□□□ 0.3
AC004540.1-201ENST00000439120 ITPAQ9BY32 194 aa16.9■□□□□ 0.3
AC004540.1-201ENST00000439120 PRODH2Q9UF12 536 aa16.9■□□□□ 0.3
AC004540.1-201ENST00000439120 UTS2RQ9UKP6 389 aa16.9■□□□□ 0.3
AC004540.1-201ENST00000439120 DTX4Q9Y2E6 619 aa16.9■□□□□ 0.3
AC004540.1-201ENST00000439120 C15orf41Q9Y2V0 281 aa16.9■□□□□ 0.3
AC004540.1-201ENST00000439120 ARHGAP21Q5T5U3 1957 aa16.89■□□□□ 0.3
AC004540.1-201ENST00000439120 EXPH5Q8NEV8 1989 aa16.89■□□□□ 0.3
AC004540.1-201ENST00000439120 AHRRA9YTQ3 701 aa16.89■□□□□ 0.29
AC004540.1-201ENST00000439120 GNB5O14775 395 aa16.89■□□□□ 0.29
AC004540.1-201ENST00000439120 ACOX3O15254 700 aa16.89■□□□□ 0.29
AC004540.1-201ENST00000439120 RIPK2O43353 540 aa16.89■□□□□ 0.29
AC004540.1-201ENST00000439120 DLX3O60479 287 aa16.89■□□□□ 0.29
AC004540.1-201ENST00000439120 ZWINTO95229 277 aa16.89■□□□□ 0.29
AC004540.1-201ENST00000439120 NAGAP17050 411 aa16.89■□□□□ 0.29
AC004540.1-201ENST00000439120 S1PR1P21453 382 aa16.89■□□□□ 0.29
AC004540.1-201ENST00000439120 GCKP35557 465 aa16.89■□□□□ 0.29
AC004540.1-201ENST00000439120 CDK9P50750 372 aaKnown RBP16.89■□□□□ 0.29
AC004540.1-201ENST00000439120 DCAF7P61962 342 aa16.89■□□□□ 0.29
AC004540.1-201ENST00000439120 UNC50Q53HI1 259 aa16.89■□□□□ 0.29
AC004540.1-201ENST00000439120 CNPY4Q8N129 248 aa16.89■□□□□ 0.29
AC004540.1-201ENST00000439120 GBP7Q8N8V2 638 aaPredicted RBP16.89■□□□□ 0.29
AC004540.1-201ENST00000439120 OR52R1Q8NGF1 315 aa16.89■□□□□ 0.29
AC004540.1-201ENST00000439120 OR1J4Q8NGS1 313 aa16.89■□□□□ 0.29
AC004540.1-201ENST00000439120 OMA1Q96E52 524 aa16.89■□□□□ 0.29
AC004540.1-201ENST00000439120 TMEM41AQ96HV5 264 aa16.89■□□□□ 0.29
AC004540.1-201ENST00000439120 GIMAP4Q9NUV9 329 aa16.89■□□□□ 0.29
AC004540.1-201ENST00000439120 KLRF1Q9NZS2 232 aa16.89■□□□□ 0.29
AC004540.1-201ENST00000439120 PSMC3IPQ9P2W1 217 aaPredicted RBP16.89■□□□□ 0.29
AC004540.1-201ENST00000439120 MCM8Q9UJA3 840 aa16.89■□□□□ 0.29
AC004540.1-201ENST00000439120 ZNF225Q9UK10 706 aa16.89■□□□□ 0.29
AC004540.1-201ENST00000439120 GOLGA8RI6L899 631 aa16.88■□□□□ 0.29
AC004540.1-201ENST00000439120 DVL2O14641 736 aa16.88■□□□□ 0.29
AC004540.1-201ENST00000439120 PCDH7O60245 1069 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms