RNA–Protein interactions for RNA: ENST00000439027.1

AC011228.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC011228.1, Length 757 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC011228.1-201ENST00000439027 MS4A6EQ96DS6 147 aa8.54□□□□□ -1.04
AC011228.1-201ENST00000439027 VMP1Q96GC9 406 aa8.54□□□□□ -1.04
AC011228.1-201ENST00000439027 CCT7Q99832 543 aa8.54□□□□□ -1.04
AC011228.1-201ENST00000439027 VKORC1Q9BQB6 163 aa8.54□□□□□ -1.04
AC011228.1-201ENST00000439027 NPLQ9BXD5 320 aaPredicted RBP8.54□□□□□ -1.04
AC011228.1-201ENST00000439027 ACPTQ9BZG2 426 aa8.54□□□□□ -1.04
AC011228.1-201ENST00000439027 TRIM8Q9BZR9 551 aa8.54□□□□□ -1.04
AC011228.1-201ENST00000439027 PITHD1Q9GZP4 211 aaPredicted RBP8.54□□□□□ -1.04
AC011228.1-201ENST00000439027 DEFB127Q9H1M4 99 aa8.54□□□□□ -1.04
AC011228.1-201ENST00000439027 AKTIPQ9H8T0 292 aa8.54□□□□□ -1.04
AC011228.1-201ENST00000439027 COPS7BQ9H9Q2 264 aaPredicted RBP8.54□□□□□ -1.04
AC011228.1-201ENST00000439027 LIN28AQ9H9Z2 209 aaKnown RBP8.54□□□□□ -1.04
AC011228.1-201ENST00000439027 TCF7L2Q9NQB0 619 aa8.54□□□□□ -1.04
AC011228.1-201ENST00000439027 COQ3Q9NZJ6 369 aa8.54□□□□□ -1.04
AC011228.1-201ENST00000439027 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.54□□□□□ -1.04
AC011228.1-201ENST00000439027 GIMAP2Q9UG22 337 aa8.54□□□□□ -1.04
AC011228.1-201ENST00000439027 ARL2BPQ9Y2Y0 163 aa8.54□□□□□ -1.04
AC011228.1-201ENST00000439027 CELSR1Q9NYQ6 3014 aa8.54□□□□□ -1.04
AC011228.1-201ENST00000439027 LRIT2A6NDA9 550 aa8.53□□□□□ -1.04
AC011228.1-201ENST00000439027 A8MVJ9 347 aa8.53□□□□□ -1.04
AC011228.1-201ENST00000439027 E9PBE3 544 aa8.53□□□□□ -1.04
AC011228.1-201ENST00000439027 FOXE1O00358 373 aaPredicted RBP8.53□□□□□ -1.04
AC011228.1-201ENST00000439027 ADAM10O14672 748 aa8.53□□□□□ -1.04
AC011228.1-201ENST00000439027 RGS14O43566 566 aa8.53□□□□□ -1.04
AC011228.1-201ENST00000439027 TGFB1P01137 390 aa8.53□□□□□ -1.04
AC011228.1-201ENST00000439027 TNNI3P19429 210 aa8.53□□□□□ -1.04
AC011228.1-201ENST00000439027 NCF2P19878 526 aaPredicted RBP8.53□□□□□ -1.04
AC011228.1-201ENST00000439027 POU3F2P20265 443 aaPredicted RBP8.53□□□□□ -1.04
AC011228.1-201ENST00000439027 PIK3CBP42338 1070 aa8.53□□□□□ -1.04
AC011228.1-201ENST00000439027 HNRNPFP52597 415 aaKnown RBP8.53□□□□□ -1.04
AC011228.1-201ENST00000439027 HSD17B7P56937 341 aa8.53□□□□□ -1.04
AC011228.1-201ENST00000439027 RPS13P62277 151 aaKnown RBP8.53□□□□□ -1.04
AC011228.1-201ENST00000439027 PHEXP78562 749 aa8.53□□□□□ -1.04
AC011228.1-201ENST00000439027 HMGCS1Q01581 520 aa8.53□□□□□ -1.04
AC011228.1-201ENST00000439027 PLGLB1Q02325 96 aa8.53□□□□□ -1.04
AC011228.1-201ENST00000439027 TGM3Q08188 693 aa8.53□□□□□ -1.04
AC011228.1-201ENST00000439027 STX4Q12846 297 aa8.53□□□□□ -1.04
AC011228.1-201ENST00000439027 GALNTL6Q49A17 601 aa8.53□□□□□ -1.04
AC011228.1-201ENST00000439027 CMPK2Q5EBM0 449 aa8.53□□□□□ -1.04
AC011228.1-201ENST00000439027 SPDYAQ5MJ70 313 aa8.53□□□□□ -1.04
AC011228.1-201ENST00000439027 TRIM40Q6P9F5 258 aa8.53□□□□□ -1.04
AC011228.1-201ENST00000439027 RNF165Q6ZSG1 346 aa8.53□□□□□ -1.04
AC011228.1-201ENST00000439027 MDGA2Q7Z553 956 aa8.53□□□□□ -1.04
AC011228.1-201ENST00000439027 VN1R5Q7Z5H4 357 aa8.53□□□□□ -1.04
AC011228.1-201ENST00000439027 CD163Q86VB7 1156 aa8.53□□□□□ -1.04
AC011228.1-201ENST00000439027 SCUBE1Q8IWY4 988 aa8.53□□□□□ -1.04
AC011228.1-201ENST00000439027 ZNF595Q8IYB9 648 aa8.53□□□□□ -1.04
AC011228.1-201ENST00000439027 TMEM132CQ8N3T6 1108 aa8.53□□□□□ -1.04
AC011228.1-201ENST00000439027 GBP7Q8N8V2 638 aaPredicted RBP8.53□□□□□ -1.04
AC011228.1-201ENST00000439027 ANKS4BQ8N8V4 417 aa8.53□□□□□ -1.04
AC011228.1-201ENST00000439027 APCDD1LQ8NCL9 501 aa8.53□□□□□ -1.04
AC011228.1-201ENST00000439027 TMEM52Q8NDY8 209 aa8.53□□□□□ -1.04
AC011228.1-201ENST00000439027 OR2T11Q8NH01 316 aa8.53□□□□□ -1.04
AC011228.1-201ENST00000439027 CEP70Q8NHQ1 597 aa8.53□□□□□ -1.04
AC011228.1-201ENST00000439027 ACTRT2Q8TDY3 377 aa8.53□□□□□ -1.04
AC011228.1-201ENST00000439027 PHF10Q8WUB8 498 aaKnown RBP8.53□□□□□ -1.04
AC011228.1-201ENST00000439027 ASB15Q8WXK1 588 aa8.53□□□□□ -1.04
AC011228.1-201ENST00000439027 MAELQ96JY0 434 aaKnown RBP8.53□□□□□ -1.04
AC011228.1-201ENST00000439027 DMRTA2Q96SC8 542 aa8.53□□□□□ -1.04
AC011228.1-201ENST00000439027 CCDC28BQ9BUN5 200 aa8.53□□□□□ -1.04
AC011228.1-201ENST00000439027 REXO4Q9GZR2 422 aaKnown RBP8.53□□□□□ -1.04
AC011228.1-201ENST00000439027 BRF2Q9HAW0 419 aa8.53□□□□□ -1.04
AC011228.1-201ENST00000439027 HPF1Q9NWY4 346 aa8.53□□□□□ -1.04
AC011228.1-201ENST00000439027 KCMF1Q9P0J7 381 aa8.53□□□□□ -1.04
AC011228.1-201ENST00000439027 HEY2Q9UBP5 337 aa8.53□□□□□ -1.04
AC011228.1-201ENST00000439027 ADGRE2Q9UHX3 823 aa8.53□□□□□ -1.04
AC011228.1-201ENST00000439027 SLC12A4Q9UP95 1085 aa8.53□□□□□ -1.04
AC011228.1-201ENST00000439027 YARS2Q9Y2Z4 477 aaKnown RBP8.53□□□□□ -1.04
AC011228.1-201ENST00000439027 CCL27Q9Y4X3 112 aa8.53□□□□□ -1.04
AC011228.1-201ENST00000439027 CLCA3PQ9Y6N3 262 aa8.53□□□□□ -1.04
AC011228.1-201ENST00000439027 SERTM1A2A2V5 107 aa8.52□□□□□ -1.05
AC011228.1-201ENST00000439027 FAM166BA8MTA8 275 aa8.52□□□□□ -1.05
AC011228.1-201ENST00000439027 G3V3Y1 287 aa8.52□□□□□ -1.05
AC011228.1-201ENST00000439027 TGFBR3LH3BV60 316 aa8.52□□□□□ -1.05
AC011228.1-201ENST00000439027 WWP2O00308 870 aa8.52□□□□□ -1.05
AC011228.1-201ENST00000439027 SAP18O00422 153 aaKnown RBP8.52□□□□□ -1.05
AC011228.1-201ENST00000439027 LSM1O15116 133 aaKnown RBP8.52□□□□□ -1.05
AC011228.1-201ENST00000439027 PRKNO60260 465 aaPredicted RBP8.52□□□□□ -1.05
AC011228.1-201ENST00000439027 CTNSO60931 367 aa8.52□□□□□ -1.05
AC011228.1-201ENST00000439027 SEC22BO75396 215 aa8.52□□□□□ -1.05
AC011228.1-201ENST00000439027 CLEC3AO75596 197 aa8.52□□□□□ -1.05
AC011228.1-201ENST00000439027 OR2J2O76002 312 aa8.52□□□□□ -1.05
AC011228.1-201ENST00000439027 ETHE1O95571 254 aa8.52□□□□□ -1.05
AC011228.1-201ENST00000439027 HSD3B1P14060 373 aa8.52□□□□□ -1.05
AC011228.1-201ENST00000439027 LBPP18428 481 aa8.52□□□□□ -1.05
AC011228.1-201ENST00000439027 PTX3P26022 381 aaPredicted RBP8.52□□□□□ -1.05
AC011228.1-201ENST00000439027 HSD3B2P26439 372 aa8.52□□□□□ -1.05
AC011228.1-201ENST00000439027 CERS1P27544 350 aa8.52□□□□□ -1.05
AC011228.1-201ENST00000439027 GSTM2P28161 218 aa8.52□□□□□ -1.05
AC011228.1-201ENST00000439027 SERPINB1P30740 379 aa8.52□□□□□ -1.05
AC011228.1-201ENST00000439027 MTTPP55157 894 aa8.52□□□□□ -1.05
AC011228.1-201ENST00000439027 LIM2P55344 173 aa8.52□□□□□ -1.05
AC011228.1-201ENST00000439027 KRTAP10-9P60411 292 aa8.52□□□□□ -1.05
AC011228.1-201ENST00000439027 PPIAP62937 165 aaKnown RBP8.52□□□□□ -1.05
AC011228.1-201ENST00000439027 TLE4Q04727 773 aa8.52□□□□□ -1.05
AC011228.1-201ENST00000439027 CSTF3Q12996 717 aaKnown RBP8.52□□□□□ -1.05
AC011228.1-201ENST00000439027 ELAVL1Q15717 326 aaKnown RBP8.52□□□□□ -1.05
AC011228.1-201ENST00000439027 AP5B1Q2VPB7 878 aa8.52□□□□□ -1.05
AC011228.1-201ENST00000439027 ATP6AP1LQ52LC2 224 aa8.52□□□□□ -1.05
AC011228.1-201ENST00000439027 C6orf136Q5SQH8 315 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms