RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 RASGEF1AQ8N9B8 481 aa6.35□□□□□ -1.39
CSDE1-205ENST00000438362 POMGNT2Q8NAT1 580 aa6.35□□□□□ -1.39
CSDE1-205ENST00000438362 OR52P1PQ8NH57 321 aa6.35□□□□□ -1.39
CSDE1-205ENST00000438362 WFDC5Q8TCV5 224 aa6.35□□□□□ -1.39
CSDE1-205ENST00000438362 CREB3L1Q96BA8 519 aa6.35□□□□□ -1.39
CSDE1-205ENST00000438362 CHFRQ96EP1 664 aa6.35□□□□□ -1.39
CSDE1-205ENST00000438362 TXNDC15Q96J42 360 aa6.35□□□□□ -1.39
CSDE1-205ENST00000438362 DPH7Q9BTV6 452 aa6.35□□□□□ -1.39
CSDE1-205ENST00000438362 ACTL8Q9H568 366 aa6.35□□□□□ -1.39
CSDE1-205ENST00000438362 FOLH1BQ9HBA9 442 aa6.35□□□□□ -1.39
CSDE1-205ENST00000438362 AKIP1Q9NQ31 210 aa6.35□□□□□ -1.39
CSDE1-205ENST00000438362 SOHLH2Q9NX45 425 aa6.35□□□□□ -1.39
CSDE1-205ENST00000438362 HS3ST2Q9Y278 367 aa6.35□□□□□ -1.39
CSDE1-205ENST00000438362 FKBP7Q9Y680 259 aa6.35□□□□□ -1.39
CSDE1-205ENST00000438362 KNL1Q8NG31 2342 aa6.34□□□□□ -1.39
CSDE1-205ENST00000438362 ANXA2P2A6NMY6 339 aa6.34□□□□□ -1.39
CSDE1-205ENST00000438362 FAM47E-STBD1D6RA91 191 aa6.34□□□□□ -1.39
CSDE1-205ENST00000438362 FOXE1O00358 373 aaPredicted RBP6.34□□□□□ -1.39
CSDE1-205ENST00000438362 ITGA10O75578 1167 aa6.34□□□□□ -1.39
CSDE1-205ENST00000438362 SEMA3DO95025 777 aa6.34□□□□□ -1.39
CSDE1-205ENST00000438362 CYP17A1P05093 508 aa6.34□□□□□ -1.39
CSDE1-205ENST00000438362 ANXA2P07355 339 aaKnown RBP6.34□□□□□ -1.39
CSDE1-205ENST00000438362 ACPPP15309 386 aa6.34□□□□□ -1.39
CSDE1-205ENST00000438362 TIMP2P16035 220 aa6.34□□□□□ -1.39
CSDE1-205ENST00000438362 HK1P19367 917 aa6.34□□□□□ -1.39
CSDE1-205ENST00000438362 CFL1P23528 166 aaKnown RBP6.34□□□□□ -1.39
CSDE1-205ENST00000438362 EDNRAP25101 427 aa6.34□□□□□ -1.39
CSDE1-205ENST00000438362 GPR4P46093 362 aa6.34□□□□□ -1.39
CSDE1-205ENST00000438362 GIPRP48546 466 aa6.34□□□□□ -1.39
CSDE1-205ENST00000438362 ERVK-21P61565 698 aa6.34□□□□□ -1.39
CSDE1-205ENST00000438362 SLC7A9P82251 487 aa6.34□□□□□ -1.39
CSDE1-205ENST00000438362 MRPL58Q14197 206 aaKnown RBP6.34□□□□□ -1.39
CSDE1-205ENST00000438362 INAVAQ3KP66 663 aa6.34□□□□□ -1.39
CSDE1-205ENST00000438362 COX20Q5RI15 118 aa6.34□□□□□ -1.39
CSDE1-205ENST00000438362 CYHR1Q6ZMK1 362 aa6.34□□□□□ -1.39
CSDE1-205ENST00000438362 SLCO4C1Q6ZQN7 724 aa6.34□□□□□ -1.39
CSDE1-205ENST00000438362 AMIGO1Q86WK6 493 aa6.34□□□□□ -1.39
CSDE1-205ENST00000438362 COMMD2Q86X83 199 aa6.34□□□□□ -1.39
CSDE1-205ENST00000438362 NRROSQ86YC3 692 aa6.34□□□□□ -1.39
CSDE1-205ENST00000438362 GPALPP1Q8IXQ4 340 aa6.34□□□□□ -1.39
CSDE1-205ENST00000438362 SYNPOQ8N3V7 929 aa6.34□□□□□ -1.39
CSDE1-205ENST00000438362 CAMKVQ8NCB2 501 aa6.34□□□□□ -1.39
CSDE1-205ENST00000438362 OR4E2Q8NGC2 313 aa6.34□□□□□ -1.39
CSDE1-205ENST00000438362 OR4K14Q8NGD5 310 aa6.34□□□□□ -1.39
CSDE1-205ENST00000438362 OR5AR1Q8NGP9 310 aa6.34□□□□□ -1.39
CSDE1-205ENST00000438362 OR8K5Q8NH50 307 aa6.34□□□□□ -1.39
CSDE1-205ENST00000438362 FANK1Q8TC84 345 aa6.34□□□□□ -1.39
CSDE1-205ENST00000438362 FAM46AQ96IP4 442 aaKnown RBP6.34□□□□□ -1.39
CSDE1-205ENST00000438362 NEURL2Q9BR09 285 aa6.34□□□□□ -1.39
CSDE1-205ENST00000438362 GINS4Q9BRT9 223 aa6.34□□□□□ -1.39
CSDE1-205ENST00000438362 FUZQ9BT04 418 aa6.34□□□□□ -1.39
CSDE1-205ENST00000438362 LINC00597Q9H2U6 94 aa6.34□□□□□ -1.39
CSDE1-205ENST00000438362 ZNF334Q9HCZ1 680 aaPredicted RBP6.34□□□□□ -1.39
CSDE1-205ENST00000438362 LYARQ9NX58 379 aaKnown RBP6.34□□□□□ -1.39
CSDE1-205ENST00000438362 NFKBIL1Q9UBC1 381 aaPredicted RBP6.34□□□□□ -1.39
CSDE1-205ENST00000438362 N6AMT1Q9Y5N5 214 aa6.34□□□□□ -1.39
CSDE1-205ENST00000438362 NRXN2Q9P2S2 1712 aa6.34□□□□□ -1.39
CSDE1-205ENST00000438362 COL4A5P29400 1685 aa6.34□□□□□ -1.39
CSDE1-205ENST00000438362 ZNFX1Q9P2E3 1918 aaKnown RBP6.34□□□□□ -1.39
CSDE1-205ENST00000438362 TRBV4-1A0A0J9YWV2 114 aa6.34□□□□□ -1.39
CSDE1-205ENST00000438362 LRRN3E7EW58 273 aa6.34□□□□□ -1.39
CSDE1-205ENST00000438362 CLDN4O14493 209 aa6.34□□□□□ -1.39
CSDE1-205ENST00000438362 SCN2BO60939 215 aa6.34□□□□□ -1.39
CSDE1-205ENST00000438362 MRPL3P09001 348 aaKnown RBP6.34□□□□□ -1.39
CSDE1-205ENST00000438362 ANXA3P12429 323 aa6.34□□□□□ -1.39
CSDE1-205ENST00000438362 HMGA1P17096 107 aaKnown RBP6.34□□□□□ -1.39
CSDE1-205ENST00000438362 SSTR4P31391 388 aa6.34□□□□□ -1.39
CSDE1-205ENST00000438362 HTR2BP41595 481 aa6.34□□□□□ -1.39
CSDE1-205ENST00000438362 RAB40BQ12829 278 aa6.34□□□□□ -1.39
CSDE1-205ENST00000438362 GRIN2CQ14957 1233 aa6.34□□□□□ -1.39
CSDE1-205ENST00000438362 NUMA1Q14980 2115 aa6.34□□□□□ -1.39
CSDE1-205ENST00000438362 LRRC26Q2I0M4 334 aa6.34□□□□□ -1.39
CSDE1-205ENST00000438362 LCTLQ6UWM7 567 aa6.34□□□□□ -1.39
CSDE1-205ENST00000438362 DPPA4Q7L190 304 aa6.34□□□□□ -1.39
CSDE1-205ENST00000438362 CEACAM19Q7Z692 300 aa6.34□□□□□ -1.39
CSDE1-205ENST00000438362 SLC9B2Q86UD5 537 aa6.34□□□□□ -1.39
CSDE1-205ENST00000438362 CCDC28AQ8IWP9 274 aa6.34□□□□□ -1.39
CSDE1-205ENST00000438362 TIGD4Q8IY51 512 aa6.34□□□□□ -1.39
CSDE1-205ENST00000438362 SLC39A11Q8N1S5 342 aa6.34□□□□□ -1.39
CSDE1-205ENST00000438362 CELF2-AS1Q8N7Q2 184 aa6.34□□□□□ -1.39
CSDE1-205ENST00000438362 TSEN15Q8WW01 171 aaKnown RBP6.34□□□□□ -1.39
CSDE1-205ENST00000438362 YIPF6Q96EC8 236 aa6.34□□□□□ -1.39
CSDE1-205ENST00000438362 LRRN3Q9H3W5 708 aa6.34□□□□□ -1.39
CSDE1-205ENST00000438362 SLA2Q9H6Q3 261 aa6.34□□□□□ -1.39
CSDE1-205ENST00000438362 SYNDIG1Q9H7V2 258 aa6.34□□□□□ -1.39
CSDE1-205ENST00000438362 PELI2Q9HAT8 420 aa6.34□□□□□ -1.39
CSDE1-205ENST00000438362 BEX1Q9HBH7 125 aa6.34□□□□□ -1.39
CSDE1-205ENST00000438362 PLCXD1Q9NUJ7 323 aa6.34□□□□□ -1.39
CSDE1-205ENST00000438362 VNN3Q9NY84 501 aa6.34□□□□□ -1.39
CSDE1-205ENST00000438362 MICAL3Q7RTP6 2002 aa6.34□□□□□ -1.39
CSDE1-205ENST00000438362 XKRYO14609 159 aa6.34□□□□□ -1.4
CSDE1-205ENST00000438362 PAK4O96013 591 aaPredicted RBP6.34□□□□□ -1.4
CSDE1-205ENST00000438362 FURINP09958 794 aa6.34□□□□□ -1.4
CSDE1-205ENST00000438362 EPHA2P29317 976 aa6.34□□□□□ -1.4
CSDE1-205ENST00000438362 PYCR1P32322 319 aa6.34□□□□□ -1.4
CSDE1-205ENST00000438362 SLC6A12P48065 614 aa6.34□□□□□ -1.4
CSDE1-205ENST00000438362 ZNF81P51508 661 aa6.34□□□□□ -1.4
CSDE1-205ENST00000438362 GAB1Q13480 694 aa6.34□□□□□ -1.4
CSDE1-205ENST00000438362 DHCR24Q15392 516 aa6.34□□□□□ -1.4
CSDE1-205ENST00000438362 TRAM1Q15629 374 aa6.34□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms