RNA–Protein interactions for RNA: ENST00000437201.5

SBDSP1-203, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 1 (best)

Gene SBDSP1, Length 839 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-203ENST00000437201 GOLGA8RI6L899 631 aa16.11■□□□□ 0.17
SBDSP1-203ENST00000437201 ACOX3O15254 700 aa16.11■□□□□ 0.17
SBDSP1-203ENST00000437201 TRIM3O75382 744 aaPredicted RBP16.11■□□□□ 0.17
SBDSP1-203ENST00000437201 BCAS2O75934 225 aaPredicted RBP16.11■□□□□ 0.17
SBDSP1-203ENST00000437201 RFPL3SP0C7P2 107 aa16.11■□□□□ 0.17
SBDSP1-203ENST00000437201 S1PR1P21453 382 aa16.11■□□□□ 0.17
SBDSP1-203ENST00000437201 MASP1P48740 699 aa16.11■□□□□ 0.17
SBDSP1-203ENST00000437201 NUP107P57740 925 aa16.11■□□□□ 0.17
SBDSP1-203ENST00000437201 FBXW4P57775 412 aa16.11■□□□□ 0.17
SBDSP1-203ENST00000437201 ACSM2AQ08AH3 577 aa16.11■□□□□ 0.17
SBDSP1-203ENST00000437201 HEPACAMQ14CZ8 416 aa16.11■□□□□ 0.17
SBDSP1-203ENST00000437201 ACSM2BQ68CK6 577 aa16.11■□□□□ 0.17
SBDSP1-203ENST00000437201 MEX3BQ6ZN04 569 aaKnown RBP16.11■□□□□ 0.17
SBDSP1-203ENST00000437201 NEIL3Q8TAT5 605 aa16.11■□□□□ 0.17
SBDSP1-203ENST00000437201 ERP27Q96DN0 273 aa16.11■□□□□ 0.17
SBDSP1-203ENST00000437201 HSPBAP1Q96EW2 488 aa16.11■□□□□ 0.17
SBDSP1-203ENST00000437201 C14orf79Q96F83 325 aa16.11■□□□□ 0.17
SBDSP1-203ENST00000437201 HBEGFQ99075 208 aa16.11■□□□□ 0.17
SBDSP1-203ENST00000437201 ANGPTL4Q9BY76 406 aa16.11■□□□□ 0.17
SBDSP1-203ENST00000437201 PROK2Q9HC23 129 aa16.11■□□□□ 0.17
SBDSP1-203ENST00000437201 PFDN4Q9NQP4 134 aa16.11■□□□□ 0.17
SBDSP1-203ENST00000437201 GIMAP4Q9NUV9 329 aa16.11■□□□□ 0.17
SBDSP1-203ENST00000437201 ALKBH4Q9NXW9 302 aa16.11■□□□□ 0.17
SBDSP1-203ENST00000437201 UTS2RQ9UKP6 389 aa16.11■□□□□ 0.17
SBDSP1-203ENST00000437201 LRRC3CA6NJW4 275 aa16.1■□□□□ 0.17
SBDSP1-203ENST00000437201 PCDH7O60245 1069 aa16.1■□□□□ 0.17
SBDSP1-203ENST00000437201 GLRA3O75311 464 aa16.1■□□□□ 0.17
SBDSP1-203ENST00000437201 MYL2P10916 166 aa16.1■□□□□ 0.17
SBDSP1-203ENST00000437201 CAPN3P20807 821 aa16.1■□□□□ 0.17
SBDSP1-203ENST00000437201 GPX3P22352 226 aa16.1■□□□□ 0.17
SBDSP1-203ENST00000437201 ELAVL4P26378 380 aaKnown RBP16.1■□□□□ 0.17
SBDSP1-203ENST00000437201 GDF1P27539 372 aa16.1■□□□□ 0.17
SBDSP1-203ENST00000437201 ABCD3P28288 659 aa16.1■□□□□ 0.17
SBDSP1-203ENST00000437201 ZFP36L2P47974 494 aaKnown RBP16.1■□□□□ 0.17
SBDSP1-203ENST00000437201 CCT5P48643 541 aa16.1■□□□□ 0.17
SBDSP1-203ENST00000437201 SF3B4Q15427 424 aaKnown RBP eCLIP16.1■□□□□ 0.17
SBDSP1-203ENST00000437201 TMEM64Q6YI46 380 aa16.1■□□□□ 0.17
SBDSP1-203ENST00000437201 ACBD4Q8NC06 268 aa16.1■□□□□ 0.17
SBDSP1-203ENST00000437201 CTHRC1Q96CG8 243 aa16.1■□□□□ 0.17
SBDSP1-203ENST00000437201 LCORQ96JN0 433 aaPredicted RBP16.1■□□□□ 0.17
SBDSP1-203ENST00000437201 RILPQ96NA2 401 aa16.1■□□□□ 0.17
SBDSP1-203ENST00000437201 ACPTQ9BZG2 426 aa16.1■□□□□ 0.17
SBDSP1-203ENST00000437201 MAT2BQ9NZL9 334 aa16.1■□□□□ 0.17
SBDSP1-203ENST00000437201 ZNF639Q9UID6 485 aa16.1■□□□□ 0.17
SBDSP1-203ENST00000437201 DLGAP4Q9Y2H0 992 aa16.1■□□□□ 0.17
SBDSP1-203ENST00000437201 SERTM1A2A2V5 107 aa16.09■□□□□ 0.17
SBDSP1-203ENST00000437201 FAM90A27PA6NNH2 459 aa16.09■□□□□ 0.17
SBDSP1-203ENST00000437201 PPM1BO75688 479 aa16.09■□□□□ 0.17
SBDSP1-203ENST00000437201 TRAPPC6AO75865 159 aa16.09■□□□□ 0.17
SBDSP1-203ENST00000437201 ABCB1P08183 1280 aaPredicted RBP16.09■□□□□ 0.17
SBDSP1-203ENST00000437201 GLI4P10075 376 aa16.09■□□□□ 0.17
SBDSP1-203ENST00000437201 DRD5P21918 477 aa16.09■□□□□ 0.17
SBDSP1-203ENST00000437201 CASP3P42574 277 aa16.09■□□□□ 0.17
SBDSP1-203ENST00000437201 PSPHP78330 225 aa16.09■□□□□ 0.17
SBDSP1-203ENST00000437201 MGAT2Q10469 447 aa16.09■□□□□ 0.17
SBDSP1-203ENST00000437201 CCDC153Q494R4 210 aa16.09■□□□□ 0.17
SBDSP1-203ENST00000437201 TCHHL1Q5QJ38 904 aaPredicted RBP16.09■□□□□ 0.17
SBDSP1-203ENST00000437201 C1orf185Q5T7R7 199 aa16.09■□□□□ 0.17
SBDSP1-203ENST00000437201 GALNT18Q6P9A2 607 aa16.09■□□□□ 0.17
SBDSP1-203ENST00000437201 FAM111BQ6SJ93 734 aa16.09■□□□□ 0.17
SBDSP1-203ENST00000437201 NUP54Q7Z3B4 507 aa16.09■□□□□ 0.17
SBDSP1-203ENST00000437201 CCDC71Q8IV32 467 aaPredicted RBP16.09■□□□□ 0.17
SBDSP1-203ENST00000437201 ZNF295-AS1Q8N0V1 137 aa16.09■□□□□ 0.17
SBDSP1-203ENST00000437201 RPRMLQ8N4K4 120 aa16.09■□□□□ 0.17
SBDSP1-203ENST00000437201 CCNYL1Q8N7R7 359 aa16.09■□□□□ 0.17
SBDSP1-203ENST00000437201 ADCY4Q8NFM4 1077 aa16.09■□□□□ 0.17
SBDSP1-203ENST00000437201 ZNF675Q8TD23 568 aa16.09■□□□□ 0.17
SBDSP1-203ENST00000437201 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.09■□□□□ 0.17
SBDSP1-203ENST00000437201 DTNBP1Q96EV8 351 aa16.09■□□□□ 0.17
SBDSP1-203ENST00000437201 LURAP1Q96LR2 239 aa16.09■□□□□ 0.17
SBDSP1-203ENST00000437201 ZNF681Q96N22 645 aa16.09■□□□□ 0.17
SBDSP1-203ENST00000437201 TREX2Q9BQ50 279 aaPredicted RBP16.09■□□□□ 0.17
SBDSP1-203ENST00000437201 NXF5Q9H1B4 397 aaKnown RBP16.09■□□□□ 0.17
SBDSP1-203ENST00000437201 METTL7AQ9H8H3 244 aa16.09■□□□□ 0.17
SBDSP1-203ENST00000437201 GRID1Q9ULK0 1009 aa16.09■□□□□ 0.17
SBDSP1-203ENST00000437201 FAM215AQ9Y5M1 114 aa16.09■□□□□ 0.17
SBDSP1-203ENST00000437201 ABCA12Q86UK0 2595 aa16.08■□□□□ 0.17
SBDSP1-203ENST00000437201 AHRRA9YTQ3 701 aa16.08■□□□□ 0.16
SBDSP1-203ENST00000437201 TOXO94900 526 aa16.08■□□□□ 0.16
SBDSP1-203ENST00000437201 LRATO95237 230 aa16.08■□□□□ 0.16
SBDSP1-203ENST00000437201 PPICP45877 212 aa16.08■□□□□ 0.16
SBDSP1-203ENST00000437201 SNTA1Q13424 505 aa16.08■□□□□ 0.16
SBDSP1-203ENST00000437201 EXOSC7Q15024 291 aaKnown RBP16.08■□□□□ 0.16
SBDSP1-203ENST00000437201 ERCC6LQ2NKX8 1250 aa16.08■□□□□ 0.16
SBDSP1-203ENST00000437201 CFAP157Q5JU67 520 aa16.08■□□□□ 0.16
SBDSP1-203ENST00000437201 SLC30A6Q6NXT4 461 aa16.08■□□□□ 0.16
SBDSP1-203ENST00000437201 TMEM81Q6P7N7 255 aa16.08■□□□□ 0.16
SBDSP1-203ENST00000437201 ZYG11AQ6WRX3 759 aa16.08■□□□□ 0.16
SBDSP1-203ENST00000437201 PM20D2Q8IYS1 436 aa16.08■□□□□ 0.16
SBDSP1-203ENST00000437201 CLYBLQ8N0X4 340 aa16.08■□□□□ 0.16
SBDSP1-203ENST00000437201 MMP21Q8N119 569 aa16.08■□□□□ 0.16
SBDSP1-203ENST00000437201 OR52R1Q8NGF1 315 aa16.08■□□□□ 0.16
SBDSP1-203ENST00000437201 MZB1Q8WU39 189 aa16.08■□□□□ 0.16
SBDSP1-203ENST00000437201 UBLCP1Q8WVY7 318 aaPredicted RBP16.08■□□□□ 0.16
SBDSP1-203ENST00000437201 CNRIP1Q96F85 164 aaPredicted RBP16.08■□□□□ 0.16
SBDSP1-203ENST00000437201 TMEM41AQ96HV5 264 aa16.08■□□□□ 0.16
SBDSP1-203ENST00000437201 UCK2Q9BZX2 261 aa16.08■□□□□ 0.16
SBDSP1-203ENST00000437201 SLC6A15Q9H2J7 730 aa16.08■□□□□ 0.16
SBDSP1-203ENST00000437201 EPB41L4BQ9H329 900 aa16.08■□□□□ 0.16
SBDSP1-203ENST00000437201 MID1IP1Q9NPA3 183 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms