RNA–Protein interactions for RNA: ENST00000437036.6

SKA2-202, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2 BASIC

Gene SKA2, Length 625 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-202ENST00000437036 ANKRD46Q86W74 232 aa13.68□□□□□ -0.22
SKA2-202ENST00000437036 RPS19BP1Q86WX3 136 aaKnown RBP13.68□□□□□ -0.22
SKA2-202ENST00000437036 FUNDC1Q8IVP5 155 aa13.68□□□□□ -0.22
SKA2-202ENST00000437036 CLECL1Q8IZS7 167 aa13.68□□□□□ -0.22
SKA2-202ENST00000437036 OR2L13Q8N349 312 aa13.68□□□□□ -0.22
SKA2-202ENST00000437036 SIRT6Q8N6T7 355 aa13.68□□□□□ -0.22
SKA2-202ENST00000437036 ZNF321PQ8N8H1 164 aa13.68□□□□□ -0.22
SKA2-202ENST00000437036 ZNF615Q8N8J6 731 aa13.68□□□□□ -0.22
SKA2-202ENST00000437036 PSMA8Q8TAA3 256 aa13.68□□□□□ -0.22
SKA2-202ENST00000437036 EXTL1Q92935 676 aa13.68□□□□□ -0.22
SKA2-202ENST00000437036 CCDC115Q96NT0 180 aa13.68□□□□□ -0.22
SKA2-202ENST00000437036 PANX1Q96RD7 426 aa13.68□□□□□ -0.22
SKA2-202ENST00000437036 SLC25A23Q9BV35 468 aa13.68□□□□□ -0.22
SKA2-202ENST00000437036 C2orf92A0A1B0GVN3 265 aa13.67□□□□□ -0.22
SKA2-202ENST00000437036 A0A1W2PP18 115 aa13.67□□□□□ -0.22
SKA2-202ENST00000437036 UPK1AO00322 258 aa13.67□□□□□ -0.22
SKA2-202ENST00000437036 RFXANKO14593 260 aa13.67□□□□□ -0.22
SKA2-202ENST00000437036 ANGPT2O15123 496 aa13.67□□□□□ -0.22
SKA2-202ENST00000437036 SCN2BO60939 215 aa13.67□□□□□ -0.22
SKA2-202ENST00000437036 CEACAM4O75871 244 aa13.67□□□□□ -0.22
SKA2-202ENST00000437036 ANP32DO95626 131 aa13.67□□□□□ -0.22
SKA2-202ENST00000437036 ZFP36L2P47974 494 aaKnown RBP13.67□□□□□ -0.22
SKA2-202ENST00000437036 CCT3P49368 545 aaKnown RBP13.67□□□□□ -0.22
SKA2-202ENST00000437036 PRKAG1P54619 331 aa13.67□□□□□ -0.22
SKA2-202ENST00000437036 POLE2P56282 527 aa13.67□□□□□ -0.22
SKA2-202ENST00000437036 DCAF7P61962 342 aa13.67□□□□□ -0.22
SKA2-202ENST00000437036 HBA1P69905 142 aa13.67□□□□□ -0.22
SKA2-202ENST00000437036 ZNHIT3Q15649 155 aaPredicted RBP13.67□□□□□ -0.22
SKA2-202ENST00000437036 MEP1AQ16819 746 aa13.67□□□□□ -0.22
SKA2-202ENST00000437036 VPS26BQ4G0F5 336 aa13.67□□□□□ -0.22
SKA2-202ENST00000437036 C6orf10Q5SRN2 563 aa13.67□□□□□ -0.22
SKA2-202ENST00000437036 ABHD17BQ5VST6 288 aa13.67□□□□□ -0.22
SKA2-202ENST00000437036 H3F3CQ6NXT2 135 aa13.67□□□□□ -0.22
SKA2-202ENST00000437036 ISLR2Q6UXK2 745 aa13.67□□□□□ -0.22
SKA2-202ENST00000437036 LGI4Q8N135 537 aa13.67□□□□□ -0.22
SKA2-202ENST00000437036 NUP43Q8NFH3 380 aa13.67□□□□□ -0.22
SKA2-202ENST00000437036 FDCSPQ8NFU4 85 aa13.67□□□□□ -0.22
SKA2-202ENST00000437036 OR56A1Q8NGH5 318 aa13.67□□□□□ -0.22
SKA2-202ENST00000437036 NUBPLQ8TB37 319 aa13.67□□□□□ -0.22
SKA2-202ENST00000437036 SFXN5Q8TD22 340 aa13.67□□□□□ -0.22
SKA2-202ENST00000437036 BCAS4Q8TDM0 211 aa13.67□□□□□ -0.22
SKA2-202ENST00000437036 VPS33AQ96AX1 596 aa13.67□□□□□ -0.22
SKA2-202ENST00000437036 CRELD1Q96HD1 420 aa13.67□□□□□ -0.22
SKA2-202ENST00000437036 GAL3ST4Q96RP7 486 aa13.67□□□□□ -0.22
SKA2-202ENST00000437036 CDCP1Q9H5V8 836 aa13.67□□□□□ -0.22
SKA2-202ENST00000437036 ZCCHC3Q9NUD5 404 aaKnown RBP13.67□□□□□ -0.22
SKA2-202ENST00000437036 RYDENQ9NUL5 291 aaKnown RBP13.67□□□□□ -0.22
SKA2-202ENST00000437036 NTMQ9P121 344 aa13.67□□□□□ -0.22
SKA2-202ENST00000437036 LEF1Q9UJU2 399 aaPredicted RBP13.67□□□□□ -0.22
SKA2-202ENST00000437036 ZNF223Q9UK11 482 aaPredicted RBP13.67□□□□□ -0.22
SKA2-202ENST00000437036 VPS4AQ9UN37 437 aa13.67□□□□□ -0.22
SKA2-202ENST00000437036 NDUFAF1Q9Y375 327 aa13.67□□□□□ -0.22
SKA2-202ENST00000437036 PCDHGA9Q9Y5G4 932 aaKnown RBP13.67□□□□□ -0.22
SKA2-202ENST00000437036 HEMK1Q9Y5R4 338 aaPredicted RBP13.67□□□□□ -0.22
SKA2-202ENST00000437036 MAP1BP46821 2468 aaKnown RBP13.67□□□□□ -0.22
SKA2-202ENST00000437036 TTC36A6NLP5 189 aa13.66□□□□□ -0.22
SKA2-202ENST00000437036 CLPSP04118 112 aa13.66□□□□□ -0.22
SKA2-202ENST00000437036 KRT16P08779 473 aa13.66□□□□□ -0.22
SKA2-202ENST00000437036 UQCRC2P22695 453 aa13.66□□□□□ -0.22
SKA2-202ENST00000437036 TRPC1P48995 793 aa13.66□□□□□ -0.22
SKA2-202ENST00000437036 PRIM2P49643 509 aa13.66□□□□□ -0.22
SKA2-202ENST00000437036 ZNF155Q12901 538 aaPredicted RBP13.66□□□□□ -0.22
SKA2-202ENST00000437036 RAPSNQ13702 412 aa13.66□□□□□ -0.22
SKA2-202ENST00000437036 EBPQ15125 230 aaKnown RBP13.66□□□□□ -0.22
SKA2-202ENST00000437036 ACER2Q5QJU3 275 aa13.66□□□□□ -0.22
SKA2-202ENST00000437036 FHL5Q5TD97 284 aa13.66□□□□□ -0.22
SKA2-202ENST00000437036 GK5Q6ZS86 529 aa13.66□□□□□ -0.22
SKA2-202ENST00000437036 ZNF621Q6ZSS3 439 aa13.66□□□□□ -0.22
SKA2-202ENST00000437036 C9orf40Q8IXQ3 194 aa13.66□□□□□ -0.22
SKA2-202ENST00000437036 DNAJB8Q8NHS0 232 aa13.66□□□□□ -0.22
SKA2-202ENST00000437036 GOT1L1Q8NHS2 421 aaPredicted RBP13.66□□□□□ -0.22
SKA2-202ENST00000437036 C16orf52Q8NHV5 167 aa13.66□□□□□ -0.22
SKA2-202ENST00000437036 THAP3Q8WTV1 239 aaPredicted RBP13.66□□□□□ -0.22
SKA2-202ENST00000437036 PSMF1Q92530 271 aa13.66□□□□□ -0.22
SKA2-202ENST00000437036 TM9SF4Q92544 642 aa13.66□□□□□ -0.22
SKA2-202ENST00000437036 FAM120BQ96EK7 910 aaKnown RBP13.66□□□□□ -0.22
SKA2-202ENST00000437036 MS4A4EQ96PG1 132 aa13.66□□□□□ -0.22
SKA2-202ENST00000437036 LRRC37BQ96QE4 947 aa13.66□□□□□ -0.22
SKA2-202ENST00000437036 LMF1Q96S06 567 aa13.66□□□□□ -0.22
SKA2-202ENST00000437036 WWTR1Q9GZV5 400 aa13.66□□□□□ -0.22
SKA2-202ENST00000437036 EPS8L2Q9H6S3 715 aa13.66□□□□□ -0.22
SKA2-202ENST00000437036 CXorf36Q9H7Y0 433 aa13.66□□□□□ -0.22
SKA2-202ENST00000437036 SIRT3Q9NTG7 399 aaPredicted RBP13.66□□□□□ -0.22
SKA2-202ENST00000437036 STMN3Q9NZ72 180 aa13.66□□□□□ -0.22
SKA2-202ENST00000437036 ARMCX1Q9P291 453 aa13.66□□□□□ -0.22
SKA2-202ENST00000437036 PCDHGB7Q9Y5F8 929 aa13.66□□□□□ -0.22
SKA2-202ENST00000437036 PCSK5Q92824 1860 aa13.65□□□□□ -0.22
SKA2-202ENST00000437036 RNF103-CHMP3A0A140T963 221 aa13.65□□□□□ -0.22
SKA2-202ENST00000437036 CDK2AP1O14519 115 aa13.65□□□□□ -0.22
SKA2-202ENST00000437036 SOX30O94993 753 aa13.65□□□□□ -0.22
SKA2-202ENST00000437036 CAPN3P20807 821 aa13.65□□□□□ -0.22
SKA2-202ENST00000437036 SOX18P35713 384 aa13.65□□□□□ -0.22
SKA2-202ENST00000437036 CHI3L1P36222 383 aaPredicted RBP13.65□□□□□ -0.22
SKA2-202ENST00000437036 EMDP50402 254 aa13.65□□□□□ -0.22
SKA2-202ENST00000437036 NRG3P56975 720 aa13.65□□□□□ -0.22
SKA2-202ENST00000437036 MLF1P58340 268 aa13.65□□□□□ -0.22
SKA2-202ENST00000437036 PSPHP78330 225 aa13.65□□□□□ -0.22
SKA2-202ENST00000437036 STX5Q13190 355 aa13.65□□□□□ -0.22
SKA2-202ENST00000437036 TP53BP2Q13625 1128 aa13.65□□□□□ -0.22
SKA2-202ENST00000437036 CYLC2Q14093 348 aaPredicted RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms