RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 CDK5Q00535 292 aa9.82□□□□□ -0.84
CD44-210ENST00000434472 HYAL2Q12891 473 aa9.82□□□□□ -0.84
CD44-210ENST00000434472 FOXD4Q12950 439 aaPredicted RBP9.82□□□□□ -0.84
CD44-210ENST00000434472 MLLT11Q13015 90 aaPredicted RBP9.82□□□□□ -0.84
CD44-210ENST00000434472 PIN1Q13526 163 aaPredicted RBP9.82□□□□□ -0.84
CD44-210ENST00000434472 FGL2Q14314 439 aa9.82□□□□□ -0.84
CD44-210ENST00000434472 LRRC32Q14392 662 aa9.82□□□□□ -0.84
CD44-210ENST00000434472 GINS1Q14691 196 aa9.82□□□□□ -0.84
CD44-210ENST00000434472 TRAM2Q15035 370 aa9.82□□□□□ -0.84
CD44-210ENST00000434472 SSX1Q16384 188 aa9.82□□□□□ -0.84
CD44-210ENST00000434472 RPE65Q16518 533 aa9.82□□□□□ -0.84
CD44-210ENST00000434472 TMEM44Q2T9K0 475 aa9.82□□□□□ -0.84
CD44-210ENST00000434472 INAVAQ3KP66 663 aa9.82□□□□□ -0.84
CD44-210ENST00000434472 ITPRIPL2Q3MIP1 535 aa9.82□□□□□ -0.84
CD44-210ENST00000434472 GPAT3Q53EU6 434 aa9.82□□□□□ -0.84
CD44-210ENST00000434472 ATAD3BQ5T9A4 648 aa9.82□□□□□ -0.84
CD44-210ENST00000434472 MTSS1LQ765P7 747 aa9.82□□□□□ -0.84
CD44-210ENST00000434472 NRROSQ86YC3 692 aa9.82□□□□□ -0.84
CD44-210ENST00000434472 SAMD14Q8IZD0 417 aaPredicted RBP9.82□□□□□ -0.84
CD44-210ENST00000434472 CADM3Q8N126 398 aa9.82□□□□□ -0.84
CD44-210ENST00000434472 PARP16Q8N5Y8 322 aa9.82□□□□□ -0.84
CD44-210ENST00000434472 POC5Q8NA72 575 aa9.82□□□□□ -0.84
CD44-210ENST00000434472 OR2L3Q8NG85 312 aa9.82□□□□□ -0.84
CD44-210ENST00000434472 OR5D16Q8NGK9 328 aa9.82□□□□□ -0.84
CD44-210ENST00000434472 OR8K5Q8NH50 307 aa9.82□□□□□ -0.84
CD44-210ENST00000434472 GANCQ8TET4 914 aa9.82□□□□□ -0.84
CD44-210ENST00000434472 ASB12Q8WXK4 309 aa9.82□□□□□ -0.84
CD44-210ENST00000434472 UCN3Q969E3 161 aa9.82□□□□□ -0.84
CD44-210ENST00000434472 ITFG2Q969R8 447 aa9.82□□□□□ -0.84
CD44-210ENST00000434472 ARHGDIGQ99819 225 aa9.82□□□□□ -0.84
CD44-210ENST00000434472 APOOQ9BUR5 198 aa9.82□□□□□ -0.84
CD44-210ENST00000434472 CCDC32Q9BV29 185 aa9.82□□□□□ -0.84
CD44-210ENST00000434472 SLC17A9Q9BYT1 436 aa9.82□□□□□ -0.84
CD44-210ENST00000434472 AICDAQ9GZX7 198 aa9.82□□□□□ -0.84
CD44-210ENST00000434472 KLHL31Q9H511 634 aa9.82□□□□□ -0.84
CD44-210ENST00000434472 HHATLQ9HCP6 504 aa9.82□□□□□ -0.84
CD44-210ENST00000434472 ISYNA1Q9NPH2 558 aa9.82□□□□□ -0.84
CD44-210ENST00000434472 MRPS18AQ9NVS2 196 aaKnown RBP9.82□□□□□ -0.84
CD44-210ENST00000434472 KLHL28Q9NXS3 571 aa9.82□□□□□ -0.84
CD44-210ENST00000434472 TVP23BQ9NYZ1 205 aa9.82□□□□□ -0.84
CD44-210ENST00000434472 SCHIP1Q9P0W5 487 aaPredicted RBP9.82□□□□□ -0.84
CD44-210ENST00000434472 ANKMY1Q9P2S6 941 aa9.82□□□□□ -0.84
CD44-210ENST00000434472 MOSPD1Q9UJG1 213 aa9.82□□□□□ -0.84
CD44-210ENST00000434472 SSR3Q9UNL2 185 aa9.82□□□□□ -0.84
CD44-210ENST00000434472 ZNF780BQ9Y6R6 833 aa9.82□□□□□ -0.84
CD44-210ENST00000434472 PRRC2BQ5JSZ5 2229 aaKnown RBP9.82□□□□□ -0.84
CD44-210ENST00000434472 COL4A3Q01955 1670 aa9.82□□□□□ -0.84
CD44-210ENST00000434472 A0A1W2PQU0 124 aa9.82□□□□□ -0.84
CD44-210ENST00000434472 AQP9O43315 295 aa9.82□□□□□ -0.84
CD44-210ENST00000434472 TBX1O43435 398 aa9.82□□□□□ -0.84
CD44-210ENST00000434472 PLRG1O43660 514 aaKnown RBP9.82□□□□□ -0.84
CD44-210ENST00000434472 CSO75390 466 aaKnown RBP9.82□□□□□ -0.84
CD44-210ENST00000434472 AIFM1O95831 613 aa9.82□□□□□ -0.84
CD44-210ENST00000434472 APOA1P02647 267 aa9.82□□□□□ -0.84
CD44-210ENST00000434472 DNTTP04053 509 aa9.82□□□□□ -0.84
CD44-210ENST00000434472 HMGN2P05204 90 aaKnown RBP9.82□□□□□ -0.84
CD44-210ENST00000434472 CHRM4P08173 479 aa9.82□□□□□ -0.84
CD44-210ENST00000434472 F3P13726 295 aa9.82□□□□□ -0.84
CD44-210ENST00000434472 MYOGP15173 224 aa9.82□□□□□ -0.84
CD44-210ENST00000434472 MMP11P24347 488 aa9.82□□□□□ -0.84
CD44-210ENST00000434472 IGFALSP35858 605 aa9.82□□□□□ -0.84
CD44-210ENST00000434472 GIPRP48546 466 aa9.82□□□□□ -0.84
CD44-210ENST00000434472 RPS15AP62244 130 aaKnown RBP9.82□□□□□ -0.84
CD44-210ENST00000434472 DNASE1L3Q13609 305 aa9.82□□□□□ -0.84
CD44-210ENST00000434472 LASP1Q14847 261 aaKnown RBP9.82□□□□□ -0.84
CD44-210ENST00000434472 CEBPEQ15744 281 aa9.82□□□□□ -0.84
CD44-210ENST00000434472 SLC36A4Q6YBV0 504 aa9.82□□□□□ -0.84
CD44-210ENST00000434472 CCDC190Q86UF4 302 aa9.82□□□□□ -0.84
CD44-210ENST00000434472 IQCHQ86VS3 1027 aa9.82□□□□□ -0.84
CD44-210ENST00000434472 SNX29P2Q8IUI4 249 aa9.82□□□□□ -0.84
CD44-210ENST00000434472 CYP4Z2PQ8N1L4 340 aa9.82□□□□□ -0.84
CD44-210ENST00000434472 MORN4Q8NDC4 146 aa9.82□□□□□ -0.84
CD44-210ENST00000434472 NUP43Q8NFH3 380 aa9.82□□□□□ -0.84
CD44-210ENST00000434472 ST13P5Q8NFI4 369 aaPredicted RBP9.82□□□□□ -0.84
CD44-210ENST00000434472 TEX47Q8TBZ9 253 aa9.82□□□□□ -0.84
CD44-210ENST00000434472 GAL3ST3Q96A11 431 aa9.82□□□□□ -0.84
CD44-210ENST00000434472 FAM131CQ96AQ9 280 aa9.82□□□□□ -0.84
CD44-210ENST00000434472 ERLEC1Q96DZ1 483 aa9.82□□□□□ -0.84
CD44-210ENST00000434472 SCARF2Q96GP6 870 aaPredicted RBP9.82□□□□□ -0.84
CD44-210ENST00000434472 SLC38A2Q96QD8 506 aa9.82□□□□□ -0.84
CD44-210ENST00000434472 OR7D2Q96RA2 312 aa9.82□□□□□ -0.84
CD44-210ENST00000434472 ASPNQ9BXN1 380 aa9.82□□□□□ -0.84
CD44-210ENST00000434472 TEX12Q9BXU0 123 aa9.82□□□□□ -0.84
CD44-210ENST00000434472 RSPO3Q9BXY4 272 aaPredicted RBP9.82□□□□□ -0.84
CD44-210ENST00000434472 KCNK12Q9HB15 430 aa9.82□□□□□ -0.84
CD44-210ENST00000434472 CACYBPQ9HB71 228 aaKnown RBP9.82□□□□□ -0.84
CD44-210ENST00000434472 EXOSC4Q9NPD3 245 aaKnown RBP9.82□□□□□ -0.84
CD44-210ENST00000434472 ZDHHC4Q9NPG8 344 aa9.82□□□□□ -0.84
CD44-210ENST00000434472 WBP1LQ9NX94 342 aa9.82□□□□□ -0.84
CD44-210ENST00000434472 TAS2R16Q9NYV7 291 aa9.82□□□□□ -0.84
CD44-210ENST00000434472 FBXW2Q9UKT8 454 aa9.82□□□□□ -0.84
CD44-210ENST00000434472 CES1P1Q9UKY3 287 aa9.82□□□□□ -0.84
CD44-210ENST00000434472 TRAPPC4Q9Y296 219 aa9.82□□□□□ -0.84
CD44-210ENST00000434472 ATG4BQ9Y4P1 393 aa9.82□□□□□ -0.84
CD44-210ENST00000434472 PCDHGB6Q9Y5F9 930 aa9.82□□□□□ -0.84
CD44-210ENST00000434472 PCDHGA4Q9Y5G9 962 aa9.82□□□□□ -0.84
CD44-210ENST00000434472 HYKKA2RU49 373 aa9.81□□□□□ -0.84
CD44-210ENST00000434472 DUXAA6NLW8 204 aa9.81□□□□□ -0.84
CD44-210ENST00000434472 PGRMC2O15173 223 aa9.81□□□□□ -0.84
CD44-210ENST00000434472 PROM1O43490 865 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms