RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 RGS1Q08116 209 aa13.12□□□□□ -0.31
HOXC4-202ENST00000430889 CCINQ13939 588 aa13.12□□□□□ -0.31
HOXC4-202ENST00000430889 LEXMQ3ZCV2 418 aa13.12□□□□□ -0.31
HOXC4-202ENST00000430889 EOGTQ5NDL2 527 aa13.12□□□□□ -0.31
HOXC4-202ENST00000430889 TMEM236Q5W0B7 351 aa13.12□□□□□ -0.31
HOXC4-202ENST00000430889 DEF8Q6ZN54 512 aa13.12□□□□□ -0.31
HOXC4-202ENST00000430889 MORN4Q8NDC4 146 aa13.12□□□□□ -0.31
HOXC4-202ENST00000430889 OR9A2Q8NGT5 310 aa13.12□□□□□ -0.31
HOXC4-202ENST00000430889 VANGL1Q8TAA9 524 aaPredicted RBP13.12□□□□□ -0.31
HOXC4-202ENST00000430889 NDNFQ8TB73 568 aa13.12□□□□□ -0.31
HOXC4-202ENST00000430889 GPBAR1Q8TDU6 330 aa13.12□□□□□ -0.31
HOXC4-202ENST00000430889 ZFPM2Q8WW38 1151 aa13.12□□□□□ -0.31
HOXC4-202ENST00000430889 TRUB1Q8WWH5 349 aaKnown RBP13.12□□□□□ -0.31
HOXC4-202ENST00000430889 OTUB1Q96FW1 271 aaPredicted RBP13.12□□□□□ -0.31
HOXC4-202ENST00000430889 VMP1Q96GC9 406 aa13.12□□□□□ -0.31
HOXC4-202ENST00000430889 OR7D2Q96RA2 312 aa13.12□□□□□ -0.31
HOXC4-202ENST00000430889 PINK1Q9BXM7 581 aa13.12□□□□□ -0.31
HOXC4-202ENST00000430889 ITPAQ9BY32 194 aa13.12□□□□□ -0.31
HOXC4-202ENST00000430889 ALOXE3Q9BYJ1 711 aa13.12□□□□□ -0.31
HOXC4-202ENST00000430889 SLC38A1Q9H2H9 487 aa13.12□□□□□ -0.31
HOXC4-202ENST00000430889 SLC25A19Q9HC21 320 aa13.12□□□□□ -0.31
HOXC4-202ENST00000430889 PALMDQ9NP74 551 aa13.12□□□□□ -0.31
HOXC4-202ENST00000430889 GPR27Q9NS67 375 aa13.12□□□□□ -0.31
HOXC4-202ENST00000430889 GPR83Q9NYM4 423 aa13.12□□□□□ -0.31
HOXC4-202ENST00000430889 CNOT2Q9NZN8 540 aaKnown RBP13.12□□□□□ -0.31
HOXC4-202ENST00000430889 CD207Q9UJ71 328 aa13.12□□□□□ -0.31
HOXC4-202ENST00000430889 TMCC3Q9ULS5 477 aa13.12□□□□□ -0.31
HOXC4-202ENST00000430889 DUSP12Q9UNI6 340 aa13.12□□□□□ -0.31
HOXC4-202ENST00000430889 PMF1-BGLAPU3KQ54 211 aa13.12□□□□□ -0.31
HOXC4-202ENST00000430889 BRWD1Q9NSI6 2320 aa13.12□□□□□ -0.31
HOXC4-202ENST00000430889 ZIC2O95409 532 aaPredicted RBP13.12□□□□□ -0.31
HOXC4-202ENST00000430889 STSP08842 583 aa13.12□□□□□ -0.31
HOXC4-202ENST00000430889 MAGP20916 626 aa13.12□□□□□ -0.31
HOXC4-202ENST00000430889 AKT2P31751 481 aa13.12□□□□□ -0.31
HOXC4-202ENST00000430889 MPIP34949 423 aa13.12□□□□□ -0.31
HOXC4-202ENST00000430889 MC3RP41968 323 aa13.12□□□□□ -0.31
HOXC4-202ENST00000430889 CTSKP43235 329 aa13.12□□□□□ -0.31
HOXC4-202ENST00000430889 UBE2IP63279 158 aaKnown RBP13.12□□□□□ -0.31
HOXC4-202ENST00000430889 PRR5P85299 388 aa13.12□□□□□ -0.31
HOXC4-202ENST00000430889 GPR18Q14330 331 aa13.12□□□□□ -0.31
HOXC4-202ENST00000430889 GNA13Q14344 377 aa13.12□□□□□ -0.31
HOXC4-202ENST00000430889 TCEA2Q15560 299 aa13.12□□□□□ -0.31
HOXC4-202ENST00000430889 LTB4RQ15722 352 aa13.12□□□□□ -0.31
HOXC4-202ENST00000430889 HEPHL1Q6MZM0 1159 aa13.12□□□□□ -0.31
HOXC4-202ENST00000430889 Q6ZNX1 250 aa13.12□□□□□ -0.31
HOXC4-202ENST00000430889 RD3Q7Z3Z2 195 aa13.12□□□□□ -0.31
HOXC4-202ENST00000430889 SLC22A18ASQ8N1D0 253 aa13.12□□□□□ -0.31
HOXC4-202ENST00000430889 SLC15A4Q8N697 577 aa13.12□□□□□ -0.31
HOXC4-202ENST00000430889 FAM46DQ8NEK8 389 aa13.12□□□□□ -0.31
HOXC4-202ENST00000430889 NUP43Q8NFH3 380 aa13.12□□□□□ -0.31
HOXC4-202ENST00000430889 OR6T1Q8NGN1 323 aa13.12□□□□□ -0.31
HOXC4-202ENST00000430889 DACH2Q96NX9 599 aa13.12□□□□□ -0.31
HOXC4-202ENST00000430889 ARHGDIGQ99819 225 aa13.12□□□□□ -0.31
HOXC4-202ENST00000430889 YIPF4Q9BSR8 244 aa13.12□□□□□ -0.31
HOXC4-202ENST00000430889 SPATA5L1Q9BVQ7 753 aa13.12□□□□□ -0.31
HOXC4-202ENST00000430889 CDCA4Q9BXL8 241 aa13.12□□□□□ -0.31
HOXC4-202ENST00000430889 AMBNQ9NP70 447 aa13.12□□□□□ -0.31
HOXC4-202ENST00000430889 IMPAD1Q9NX62 359 aa13.12□□□□□ -0.31
HOXC4-202ENST00000430889 ACTR10Q9NZ32 417 aa13.12□□□□□ -0.31
HOXC4-202ENST00000430889 CHST2Q9Y4C5 530 aa13.12□□□□□ -0.31
HOXC4-202ENST00000430889 CORINQ9Y5Q5 1042 aa13.12□□□□□ -0.31
HOXC4-202ENST00000430889 TCRBV21S2A2A0A5A6 115 aa13.11□□□□□ -0.31
HOXC4-202ENST00000430889 IGHV4-34P06331 123 aa13.11□□□□□ -0.31
HOXC4-202ENST00000430889 ADORA3P0DMS8 318 aa13.11□□□□□ -0.31
HOXC4-202ENST00000430889 PIPP12273 146 aaPredicted RBP13.11□□□□□ -0.31
HOXC4-202ENST00000430889 CD36P16671 472 aa13.11□□□□□ -0.31
HOXC4-202ENST00000430889 PRKAG1P54619 331 aa13.11□□□□□ -0.31
HOXC4-202ENST00000430889 PIN1Q13526 163 aaPredicted RBP13.11□□□□□ -0.31
HOXC4-202ENST00000430889 RUNX2Q13950 521 aa13.11□□□□□ -0.31
HOXC4-202ENST00000430889 FBXO43Q4G163 708 aa13.11□□□□□ -0.31
HOXC4-202ENST00000430889 EXOSC6Q5RKV6 272 aaKnown RBP13.11□□□□□ -0.31
HOXC4-202ENST00000430889 PODNL1Q6PEZ8 512 aa13.11□□□□□ -0.31
HOXC4-202ENST00000430889 FIGLAQ6QHK4 219 aa13.11□□□□□ -0.31
HOXC4-202ENST00000430889 Q6ZSR6 202 aa13.11□□□□□ -0.31
HOXC4-202ENST00000430889 SLC46A3Q7Z3Q1 461 aa13.11□□□□□ -0.31
HOXC4-202ENST00000430889 SZRD1Q7Z422 152 aa13.11□□□□□ -0.31
HOXC4-202ENST00000430889 SLC44A3Q8N4M1 653 aa13.11□□□□□ -0.31
HOXC4-202ENST00000430889 B3GNT7Q8NFL0 401 aa13.11□□□□□ -0.31
HOXC4-202ENST00000430889 FGF11Q92914 225 aa13.11□□□□□ -0.31
HOXC4-202ENST00000430889 HSPBAP1Q96EW2 488 aa13.11□□□□□ -0.31
HOXC4-202ENST00000430889 PLEKHA8Q96JA3 519 aa13.11□□□□□ -0.31
HOXC4-202ENST00000430889 PRRC1Q96M27 445 aa13.11□□□□□ -0.31
HOXC4-202ENST00000430889 TRNT1Q96Q11 434 aaKnown RBP13.11□□□□□ -0.31
HOXC4-202ENST00000430889 SERINC2Q96SA4 455 aa13.11□□□□□ -0.31
HOXC4-202ENST00000430889 ROGDIQ9GZN7 287 aa13.11□□□□□ -0.31
HOXC4-202ENST00000430889 C6orf106Q9H6K1 298 aaPredicted RBP13.11□□□□□ -0.31
HOXC4-202ENST00000430889 AKIP1Q9NQ31 210 aa13.11□□□□□ -0.31
HOXC4-202ENST00000430889 GIMAP4Q9NUV9 329 aa13.11□□□□□ -0.31
HOXC4-202ENST00000430889 EVA1BQ9NVM1 165 aa13.11□□□□□ -0.31
HOXC4-202ENST00000430889 MS4A12Q9NXJ0 267 aa13.11□□□□□ -0.31
HOXC4-202ENST00000430889 GIN1Q9NXP7 522 aa13.11□□□□□ -0.31
HOXC4-202ENST00000430889 SLC9A8Q9Y2E8 581 aa13.11□□□□□ -0.31
HOXC4-202ENST00000430889 TRBV23OR9-2A0A075B6M9 112 aa13.1□□□□□ -0.31
HOXC4-202ENST00000430889 FAM221BA6H8Z2 402 aa13.1□□□□□ -0.31
HOXC4-202ENST00000430889 EFCAB10A6NFE3 127 aa13.1□□□□□ -0.31
HOXC4-202ENST00000430889 C2CD4DB7Z1M9 353 aa13.1□□□□□ -0.31
HOXC4-202ENST00000430889 SEMA4FO95754 770 aa13.1□□□□□ -0.31
HOXC4-202ENST00000430889 PTHP01270 115 aa13.1□□□□□ -0.31
HOXC4-202ENST00000430889 IGFBP1P08833 259 aaPredicted RBP13.1□□□□□ -0.31
HOXC4-202ENST00000430889 SLC35G6P0C7Q6 338 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms