RNA–Protein interactions for RNA: ENST00000430570.5

CPNE1-212, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-212ENST00000430570 ZNF441Q8N8Z8 693 aa23.28■■□□□ 1.32
CPNE1-212ENST00000430570 ADIPOR1Q96A54 375 aa23.28■■□□□ 1.32
CPNE1-212ENST00000430570 MAGED4Q96JG8 741 aa23.28■■□□□ 1.32
CPNE1-212ENST00000430570 BHLHE41Q9C0J9 482 aaPredicted RBP23.28■■□□□ 1.32
CPNE1-212ENST00000430570 ABI3Q9P2A4 366 aa23.28■■□□□ 1.32
CPNE1-212ENST00000430570 YARS2Q9Y2Z4 477 aaKnown RBP23.28■■□□□ 1.32
CPNE1-212ENST00000430570 C2orf92A0A1B0GVN3 265 aa23.27■■□□□ 1.32
CPNE1-212ENST00000430570 A0A1W2PRB8 838 aa23.27■■□□□ 1.32
CPNE1-212ENST00000430570 OR5H15A6NDH6 313 aa23.27■■□□□ 1.32
CPNE1-212ENST00000430570 PLOD2O00469 737 aa23.27■■□□□ 1.32
CPNE1-212ENST00000430570 FCHO1O14526 889 aa23.27■■□□□ 1.32
CPNE1-212ENST00000430570 DDX5P17844 614 aaKnown RBP23.27■■□□□ 1.32
CPNE1-212ENST00000430570 GPX3P22352 226 aa23.27■■□□□ 1.32
CPNE1-212ENST00000430570 SF3A3Q12874 501 aaKnown RBP eCLIP23.27■■□□□ 1.324e-8■■■□□ 17.5
CPNE1-212ENST00000430570 PLEKHN1Q494U1 663 aaPredicted RBP23.27■■□□□ 1.32
CPNE1-212ENST00000430570 PDCD4Q53EL6 469 aaKnown RBP23.27■■□□□ 1.32
CPNE1-212ENST00000430570 PIGGQ5H8A4 983 aa23.27■■□□□ 1.32
CPNE1-212ENST00000430570 SLC6A19Q695T7 634 aa23.27■■□□□ 1.32
CPNE1-212ENST00000430570 ZFP28Q8NHY6 868 aa23.27■■□□□ 1.32
CPNE1-212ENST00000430570 SIGLEC12Q96PQ1 595 aa23.27■■□□□ 1.32
CPNE1-212ENST00000430570 ZNF317Q96PQ6 595 aaPredicted RBP23.27■■□□□ 1.32
CPNE1-212ENST00000430570 RASL10BQ96S79 203 aa23.27■■□□□ 1.32
CPNE1-212ENST00000430570 UTP23Q9BRU9 249 aaKnown RBP23.27■■□□□ 1.32
CPNE1-212ENST00000430570 CLMPQ9H6B4 373 aa23.27■■□□□ 1.32
CPNE1-212ENST00000430570 ATAD3AQ9NVI7 634 aa23.27■■□□□ 1.32
CPNE1-212ENST00000430570 LUZP4Q9P127 313 aa23.27■■□□□ 1.32
CPNE1-212ENST00000430570 MAPRE3Q9UPY8 281 aa23.27■■□□□ 1.32
CPNE1-212ENST00000430570 TLN1Q9Y490 2541 aaKnown RBP23.26■■□□□ 1.31
CPNE1-212ENST00000430570 CHD6Q8TD26 2715 aa23.26■■□□□ 1.31
CPNE1-212ENST00000430570 UPK1AO00322 258 aa23.26■■□□□ 1.31
CPNE1-212ENST00000430570 NADKO95544 446 aaPredicted RBP23.26■■□□□ 1.31
CPNE1-212ENST00000430570 IDO1P14902 403 aa23.26■■□□□ 1.31
CPNE1-212ENST00000430570 TRHRP34981 398 aaPredicted RBP23.26■■□□□ 1.31
CPNE1-212ENST00000430570 TNFSF10P50591 281 aa23.26■■□□□ 1.31
CPNE1-212ENST00000430570 RPS6KA2Q15349 733 aa23.26■■□□□ 1.31
CPNE1-212ENST00000430570 GSTA3Q16772 222 aa23.26■■□□□ 1.31
CPNE1-212ENST00000430570 SPANXN4Q5MJ08 99 aa23.26■■□□□ 1.31
CPNE1-212ENST00000430570 SPINK14Q6IE38 97 aa23.26■■□□□ 1.31
CPNE1-212ENST00000430570 ZNF227Q86WZ6 799 aa23.26■■□□□ 1.31
CPNE1-212ENST00000430570 ZNF843Q8N446 348 aa23.26■■□□□ 1.31
CPNE1-212ENST00000430570 TESCQ96BS2 214 aa23.26■■□□□ 1.31
CPNE1-212ENST00000430570 ERP27Q96DN0 273 aa23.26■■□□□ 1.31
CPNE1-212ENST00000430570 ITPAQ9BY32 194 aa23.26■■□□□ 1.31
CPNE1-212ENST00000430570 C19orf53Q9UNZ5 99 aaPredicted RBP23.26■■□□□ 1.31
CPNE1-212ENST00000430570 A0A087WV62 115 aa23.25■■□□□ 1.31
CPNE1-212ENST00000430570 A0A0G2JND7 137 aa23.25■■□□□ 1.31
CPNE1-212ENST00000430570 PRAMEF2O60811 474 aa23.25■■□□□ 1.31
CPNE1-212ENST00000430570 C6orf47O95873 294 aa23.25■■□□□ 1.31
CPNE1-212ENST00000430570 GPC1P35052 558 aa23.25■■□□□ 1.31
CPNE1-212ENST00000430570 SOX3P41225 446 aa23.25■■□□□ 1.31
CPNE1-212ENST00000430570 SSR4P51571 173 aa23.25■■□□□ 1.31
CPNE1-212ENST00000430570 NR0B1P51843 470 aaKnown RBP23.25■■□□□ 1.31
CPNE1-212ENST00000430570 CLNS1AP54105 237 aaKnown RBP23.25■■□□□ 1.31
CPNE1-212ENST00000430570 OC90Q02509 493 aaPredicted RBP23.25■■□□□ 1.31
CPNE1-212ENST00000430570 SRSF11Q05519 484 aaKnown RBP23.25■■□□□ 1.31
CPNE1-212ENST00000430570 MLC1Q15049 377 aa23.25■■□□□ 1.31
CPNE1-212ENST00000430570 OR2L13Q8N349 312 aa23.25■■□□□ 1.31
CPNE1-212ENST00000430570 NATD1Q8N6N6 113 aa23.25■■□□□ 1.31
CPNE1-212ENST00000430570 Q8NA96 180 aa23.25■■□□□ 1.31
CPNE1-212ENST00000430570 OR8J2Q8NGG1 315 aa23.25■■□□□ 1.31
CPNE1-212ENST00000430570 OR5P2Q8WZ92 322 aa23.25■■□□□ 1.31
CPNE1-212ENST00000430570 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP23.25■■□□□ 1.315e-12■■■■□ 21.5
CPNE1-212ENST00000430570 SDR39U1Q9NRG7 319 aaPredicted RBP23.25■■□□□ 1.31
CPNE1-212ENST00000430570 SIRT3Q9NTG7 399 aaPredicted RBP23.25■■□□□ 1.31
CPNE1-212ENST00000430570 B3GNT3Q9Y2A9 372 aa23.25■■□□□ 1.31
CPNE1-212ENST00000430570 SCN2BO60939 215 aa23.24■■□□□ 1.31
CPNE1-212ENST00000430570 BCAS2O75934 225 aaPredicted RBP23.24■■□□□ 1.31
CPNE1-212ENST00000430570 NEURL1O76050 574 aa23.24■■□□□ 1.31
CPNE1-212ENST00000430570 SLITRK5O94991 958 aa23.24■■□□□ 1.31
CPNE1-212ENST00000430570 OR6B1O95007 311 aa23.24■■□□□ 1.31
CPNE1-212ENST00000430570 ZFP36L2P47974 494 aaKnown RBP23.24■■□□□ 1.31
CPNE1-212ENST00000430570 HLCSP50747 726 aa23.24■■□□□ 1.31
CPNE1-212ENST00000430570 DGKQP52824 942 aa23.24■■□□□ 1.31
CPNE1-212ENST00000430570 OR1C1Q15619 314 aa23.24■■□□□ 1.31
CPNE1-212ENST00000430570 HLA-DQA1Q5Y7H0 255 aa23.24■■□□□ 1.31
CPNE1-212ENST00000430570 PAOXQ6QHF9 649 aa23.24■■□□□ 1.31
CPNE1-212ENST00000430570 LYPD8Q6UX82 237 aa23.24■■□□□ 1.31
CPNE1-212ENST00000430570 CLECL1Q8IZS7 167 aa23.24■■□□□ 1.31
CPNE1-212ENST00000430570 TMEM156Q8N614 296 aa23.24■■□□□ 1.31
CPNE1-212ENST00000430570 STON2Q8WXE9 905 aa23.24■■□□□ 1.31
CPNE1-212ENST00000430570 PNPLA2Q96AD5 504 aa23.24■■□□□ 1.31
CPNE1-212ENST00000430570 SIKE1Q9BRV8 207 aa23.24■■□□□ 1.31
CPNE1-212ENST00000430570 TRIM45Q9H8W5 580 aaPredicted RBP23.24■■□□□ 1.31
CPNE1-212ENST00000430570 LRFN1Q9P244 771 aa23.24■■□□□ 1.31
CPNE1-212ENST00000430570 PRODH2Q9UF12 536 aa23.24■■□□□ 1.31
CPNE1-212ENST00000430570 ERVK-11Q9UQG0 969 aa23.24■■□□□ 1.31
CPNE1-212ENST00000430570 CFL2Q9Y281 166 aa23.24■■□□□ 1.31
CPNE1-212ENST00000430570 HEMK1Q9Y5R4 338 aaPredicted RBP23.24■■□□□ 1.31
CPNE1-212ENST00000430570 EIF4E1BA6NMX2 242 aaKnown RBP23.23■■□□□ 1.31
CPNE1-212ENST00000430570 KIR3DL1P43629 444 aa23.23■■□□□ 1.31
CPNE1-212ENST00000430570 CYB561P49447 251 aa23.23■■□□□ 1.31
CPNE1-212ENST00000430570 TLR1Q15399 786 aa23.23■■□□□ 1.31
CPNE1-212ENST00000430570 FAM174BQ3ZCQ3 159 aa23.23■■□□□ 1.31
CPNE1-212ENST00000430570 TMEM64Q6YI46 380 aa23.23■■□□□ 1.31
CPNE1-212ENST00000430570 MDS2Q8NDY4 140 aa23.23■■□□□ 1.31
CPNE1-212ENST00000430570 OR9I1Q8NGQ6 314 aa23.23■■□□□ 1.31
CPNE1-212ENST00000430570 ASB15Q8WXK1 588 aa23.23■■□□□ 1.31
CPNE1-212ENST00000430570 TP53INP1Q96A56 240 aa23.23■■□□□ 1.31
CPNE1-212ENST00000430570 TMEM120AQ9BXJ8 343 aa23.23■■□□□ 1.31
CPNE1-212ENST00000430570 HES7Q9BYE0 225 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms