RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 NEIL3Q8TAT5 605 aa10.79□□□□□ -0.68
HDAC4-202ENST00000430200 SPPL2AQ8TCT8 520 aa10.79□□□□□ -0.68
HDAC4-202ENST00000430200 SELENOMQ8WWX9 145 aa10.79□□□□□ -0.68
HDAC4-202ENST00000430200 DIO2Q92813 273 aa10.79□□□□□ -0.68
HDAC4-202ENST00000430200 HGDQ93099 445 aa10.79□□□□□ -0.68
HDAC4-202ENST00000430200 CTHRC1Q96CG8 243 aa10.79□□□□□ -0.68
HDAC4-202ENST00000430200 ZNF597Q96LX8 424 aa10.79□□□□□ -0.68
HDAC4-202ENST00000430200 JSRP1Q96MG2 331 aaPredicted RBP10.79□□□□□ -0.68
HDAC4-202ENST00000430200 NODALQ96S42 347 aa10.79□□□□□ -0.68
HDAC4-202ENST00000430200 C12orf65Q9H3J6 166 aaKnown RBP10.79□□□□□ -0.68
HDAC4-202ENST00000430200 GSTO2Q9H4Y5 243 aa10.79□□□□□ -0.68
HDAC4-202ENST00000430200 ELOVL6Q9H5J4 265 aa10.79□□□□□ -0.68
HDAC4-202ENST00000430200 GALNT9Q9HCQ5 603 aa10.79□□□□□ -0.68
HDAC4-202ENST00000430200 ADAM29Q9UKF5 820 aa10.79□□□□□ -0.68
HDAC4-202ENST00000430200 PLLPQ9Y342 182 aa10.79□□□□□ -0.68
HDAC4-202ENST00000430200 NPFFR2Q9Y5X5 522 aa10.79□□□□□ -0.68
HDAC4-202ENST00000430200 MPDZO75970 2070 aa10.78□□□□□ -0.68
HDAC4-202ENST00000430200 C2orf72A6NCS6 295 aa10.78□□□□□ -0.68
HDAC4-202ENST00000430200 FIGNL2A6NMB9 653 aa10.78□□□□□ -0.68
HDAC4-202ENST00000430200 HCN1O60741 890 aa10.78□□□□□ -0.68
HDAC4-202ENST00000430200 ERAL1O75616 437 aaKnown RBP10.78□□□□□ -0.68
HDAC4-202ENST00000430200 OTCP00480 354 aa10.78□□□□□ -0.68
HDAC4-202ENST00000430200 ATP1B1P05026 303 aa10.78□□□□□ -0.68
HDAC4-202ENST00000430200 IL3P08700 152 aa10.78□□□□□ -0.68
HDAC4-202ENST00000430200 SNRPAP09012 282 aaKnown RBP10.78□□□□□ -0.68
HDAC4-202ENST00000430200 CNTFP26441 200 aa10.78□□□□□ -0.68
HDAC4-202ENST00000430200 GDF1P27539 372 aa10.78□□□□□ -0.68
HDAC4-202ENST00000430200 SSTR2P30874 369 aa10.78□□□□□ -0.68
HDAC4-202ENST00000430200 HMGCS1Q01581 520 aa10.78□□□□□ -0.68
HDAC4-202ENST00000430200 SLC10A1Q14973 349 aa10.78□□□□□ -0.68
HDAC4-202ENST00000430200 ACSF3Q4G176 576 aaPredicted RBP10.78□□□□□ -0.68
HDAC4-202ENST00000430200 TRMT12Q53H54 448 aaKnown RBP10.78□□□□□ -0.68
HDAC4-202ENST00000430200 SCIMPQ6UWF3 145 aa10.78□□□□□ -0.68
HDAC4-202ENST00000430200 NPSR1Q6W5P4 371 aa10.78□□□□□ -0.68
HDAC4-202ENST00000430200 TIFABQ6ZNK6 161 aa10.78□□□□□ -0.68
HDAC4-202ENST00000430200 TAOK1Q7L7X3 1001 aa10.78□□□□□ -0.68
HDAC4-202ENST00000430200 CDH24Q86UP0 819 aa10.78□□□□□ -0.68
HDAC4-202ENST00000430200 ASB5Q8WWX0 329 aa10.78□□□□□ -0.68
HDAC4-202ENST00000430200 KLHL29Q96CT2 875 aa10.78□□□□□ -0.68
HDAC4-202ENST00000430200 C11orf24Q96F05 449 aaPredicted RBP10.78□□□□□ -0.68
HDAC4-202ENST00000430200 APIPQ96GX9 242 aa10.78□□□□□ -0.68
HDAC4-202ENST00000430200 GNRHR2Q96P88 292 aa10.78□□□□□ -0.68
HDAC4-202ENST00000430200 ZNF382Q96SR6 550 aa10.78□□□□□ -0.68
HDAC4-202ENST00000430200 EBPLQ9BY08 206 aa10.78□□□□□ -0.68
HDAC4-202ENST00000430200 BRINP2Q9C0B6 783 aa10.78□□□□□ -0.68
HDAC4-202ENST00000430200 WDR41Q9HAD4 459 aa10.78□□□□□ -0.68
HDAC4-202ENST00000430200 MCCC2Q9HCC0 563 aa10.78□□□□□ -0.68
HDAC4-202ENST00000430200 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.78□□□□□ -0.68
HDAC4-202ENST00000430200 CNIH4Q9P003 139 aa10.78□□□□□ -0.68
HDAC4-202ENST00000430200 TMCO1Q9UM00 188 aa10.78□□□□□ -0.68
HDAC4-202ENST00000430200 BOKQ9UMX3 212 aaPredicted RBP10.78□□□□□ -0.68
HDAC4-202ENST00000430200 C15orf41Q9Y2V0 281 aa10.78□□□□□ -0.68
HDAC4-202ENST00000430200 SLC6A5Q9Y345 797 aa10.78□□□□□ -0.68
HDAC4-202ENST00000430200 L3MBTL1Q9Y468 752 aa10.78□□□□□ -0.68
HDAC4-202ENST00000430200 A0A1W2PPM1 405 aa10.77□□□□□ -0.69
HDAC4-202ENST00000430200 C1orf226A1L170 272 aa10.77□□□□□ -0.69
HDAC4-202ENST00000430200 ANKRD33BA6NCL7 494 aa10.77□□□□□ -0.69
HDAC4-202ENST00000430200 GNB5O14775 395 aa10.77□□□□□ -0.69
HDAC4-202ENST00000430200 DYRK3O43781 588 aa10.77□□□□□ -0.69
HDAC4-202ENST00000430200 WDR1O75083 606 aa10.77□□□□□ -0.69
HDAC4-202ENST00000430200 UGT2B11O75310 529 aa10.77□□□□□ -0.69
HDAC4-202ENST00000430200 SHBGP04278 402 aa10.77□□□□□ -0.69
HDAC4-202ENST00000430200 ABCB1P08183 1280 aaPredicted RBP10.77□□□□□ -0.69
HDAC4-202ENST00000430200 RHOXF2BP0C7M4 288 aa10.77□□□□□ -0.69
HDAC4-202ENST00000430200 PORP16435 677 aaPredicted RBP10.77□□□□□ -0.69
HDAC4-202ENST00000430200 PTPN6P29350 595 aa10.77□□□□□ -0.69
HDAC4-202ENST00000430200 SERPINB3P29508 390 aa10.77□□□□□ -0.69
HDAC4-202ENST00000430200 CASP3P42574 277 aa10.77□□□□□ -0.69
HDAC4-202ENST00000430200 ALDH9A1P49189 494 aa10.77□□□□□ -0.69
HDAC4-202ENST00000430200 EMDP50402 254 aa10.77□□□□□ -0.69
HDAC4-202ENST00000430200 CDK9P50750 372 aaKnown RBP10.77□□□□□ -0.69
HDAC4-202ENST00000430200 CORO7P57737 925 aa10.77□□□□□ -0.69
HDAC4-202ENST00000430200 EIPR1Q53HC9 387 aa10.77□□□□□ -0.69
HDAC4-202ENST00000430200 ZNF628Q5EBL2 1059 aa10.77□□□□□ -0.69
HDAC4-202ENST00000430200 TEX35Q5T0J7 233 aa10.77□□□□□ -0.69
HDAC4-202ENST00000430200 TMEM211Q6ICI0 200 aa10.77□□□□□ -0.69
HDAC4-202ENST00000430200 PAOXQ6QHF9 649 aa10.77□□□□□ -0.69
HDAC4-202ENST00000430200 SH2D5Q6ZV89 423 aa10.77□□□□□ -0.69
HDAC4-202ENST00000430200 EID3Q8N140 333 aa10.77□□□□□ -0.69
HDAC4-202ENST00000430200 TNIP2Q8NFZ5 429 aa10.77□□□□□ -0.69
HDAC4-202ENST00000430200 OR52R1Q8NGF1 315 aa10.77□□□□□ -0.69
HDAC4-202ENST00000430200 OR9A2Q8NGT5 310 aa10.77□□□□□ -0.69
HDAC4-202ENST00000430200 CHTF18Q8WVB6 975 aa10.77□□□□□ -0.69
HDAC4-202ENST00000430200 TP53INP1Q96A56 240 aa10.77□□□□□ -0.69
HDAC4-202ENST00000430200 OMA1Q96E52 524 aa10.77□□□□□ -0.69
HDAC4-202ENST00000430200 RHOXF2Q9BQY4 288 aa10.77□□□□□ -0.69
HDAC4-202ENST00000430200 ANGPTL4Q9BY76 406 aa10.77□□□□□ -0.69
HDAC4-202ENST00000430200 LDAHQ9H6V9 325 aa10.77□□□□□ -0.69
HDAC4-202ENST00000430200 BRF2Q9HAW0 419 aa10.77□□□□□ -0.69
HDAC4-202ENST00000430200 ACKR4Q9NPB9 350 aa10.77□□□□□ -0.69
HDAC4-202ENST00000430200 ITGB1BP2Q9UKP3 347 aa10.77□□□□□ -0.69
HDAC4-202ENST00000430200 ACAD8Q9UKU7 415 aa10.77□□□□□ -0.69
HDAC4-202ENST00000430200 TIMM22Q9Y584 194 aa10.77□□□□□ -0.69
HDAC4-202ENST00000430200 IKBKGQ9Y6K9 419 aa10.77□□□□□ -0.69
HDAC4-202ENST00000430200 C15orf38-AP3S2A0A0A6YYH1 394 aa10.76□□□□□ -0.69
HDAC4-202ENST00000430200 G3V2L1 256 aa10.76□□□□□ -0.69
HDAC4-202ENST00000430200 PCDH7O60245 1069 aa10.76□□□□□ -0.69
HDAC4-202ENST00000430200 PPM1BO75688 479 aa10.76□□□□□ -0.69
HDAC4-202ENST00000430200 SUPT7LO94864 414 aa10.76□□□□□ -0.69
HDAC4-202ENST00000430200 HPNP05981 417 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms