RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 OR9A4Q8NGU2 314 aa12.25□□□□□ -0.45
PTCH1-207ENST00000429896 EHD1Q9H4M9 534 aa12.25□□□□□ -0.45
PTCH1-207ENST00000429896 ING4Q9UNL4 249 aa12.25□□□□□ -0.45
PTCH1-207ENST00000429896 BCKDHBP21953 392 aa12.24□□□□□ -0.45
PTCH1-207ENST00000429896 PDX1P52945 283 aa12.24□□□□□ -0.45
PTCH1-207ENST00000429896 SWI5Q1ZZU3 235 aa12.24□□□□□ -0.45
PTCH1-207ENST00000429896 OGFOD2Q6N063 350 aa12.24□□□□□ -0.45
PTCH1-207ENST00000429896 BBS10Q8TAM1 723 aa12.24□□□□□ -0.45
PTCH1-207ENST00000429896 ZNF347Q96SE7 839 aa12.24□□□□□ -0.45
PTCH1-207ENST00000429896 PPP4R1LQ9P1A2 415 aa12.24□□□□□ -0.45
PTCH1-207ENST00000429896 P04436 131 aa12.24□□□□□ -0.45
PTCH1-207ENST00000429896 ACADLP28330 430 aa12.24□□□□□ -0.45
PTCH1-207ENST00000429896 NXPH1P58417 271 aa12.24□□□□□ -0.45
PTCH1-207ENST00000429896 TRA2BP62995 288 aaKnown RBP12.24□□□□□ -0.45
PTCH1-207ENST00000429896 BLMHQ13867 455 aa12.24□□□□□ -0.45
PTCH1-207ENST00000429896 C1orf94Q6P1W5 598 aa12.24□□□□□ -0.45
PTCH1-207ENST00000429896 FAM83HQ6ZRV2 1179 aaPredicted RBP12.24□□□□□ -0.45
PTCH1-207ENST00000429896 SLC5A8Q8N695 610 aa12.24□□□□□ -0.45
PTCH1-207ENST00000429896 ATXN7L1Q9ULK2 861 aaPredicted RBP12.24□□□□□ -0.45
PTCH1-207ENST00000429896 RLFQ13129 1914 aa12.24□□□□□ -0.45
PTCH1-207ENST00000429896 LOC100509620A0A075B734 347 aa12.24□□□□□ -0.45
PTCH1-207ENST00000429896 A0A096LPI6 279 aa12.24□□□□□ -0.45
PTCH1-207ENST00000429896 FGF4P08620 206 aa12.24□□□□□ -0.45
PTCH1-207ENST00000429896 CLEC12AQ5QGZ9 265 aa12.24□□□□□ -0.45
PTCH1-207ENST00000429896 PQLC1Q8N2U9 271 aa12.24□□□□□ -0.45
PTCH1-207ENST00000429896 DOK4Q8TEW6 326 aa12.24□□□□□ -0.45
PTCH1-207ENST00000429896 RSC1A1Q92681 617 aa12.24□□□□□ -0.45
PTCH1-207ENST00000429896 SORBS1Q9BX66 1292 aaKnown RBP12.24□□□□□ -0.45
PTCH1-207ENST00000429896 SOX17Q9H6I2 414 aaPredicted RBP12.24□□□□□ -0.45
PTCH1-207ENST00000429896 A6NL46 340 aa12.24□□□□□ -0.45
PTCH1-207ENST00000429896 CCNB2O95067 398 aa12.24□□□□□ -0.45
PTCH1-207ENST00000429896 OR1D4P47884 311 aa12.24□□□□□ -0.45
PTCH1-207ENST00000429896 FZD2Q14332 565 aa12.24□□□□□ -0.45
PTCH1-207ENST00000429896 OR6K6Q8NGW6 343 aa12.24□□□□□ -0.45
PTCH1-207ENST00000429896 LINC00615Q96LM1 132 aaPredicted RBP12.24□□□□□ -0.45
PTCH1-207ENST00000429896 OR51I1Q9H343 314 aa12.24□□□□□ -0.45
PTCH1-207ENST00000429896 NXT1Q9UKK6 140 aaKnown RBP12.24□□□□□ -0.45
PTCH1-207ENST00000429896 BCKDKO14874 412 aa12.24□□□□□ -0.45
PTCH1-207ENST00000429896 CHST10O43529 356 aa12.24□□□□□ -0.45
PTCH1-207ENST00000429896 CSF2P04141 144 aa12.24□□□□□ -0.45
PTCH1-207ENST00000429896 HOXC4P09017 264 aaPredicted RBP12.24□□□□□ -0.45
PTCH1-207ENST00000429896 ZNF806P0C7X5 589 aa12.24□□□□□ -0.45
PTCH1-207ENST00000429896 TGFBR2P37173 567 aa12.24□□□□□ -0.45
PTCH1-207ENST00000429896 CASP6P55212 293 aa12.24□□□□□ -0.45
PTCH1-207ENST00000429896 ZNF627Q7L945 461 aa12.24□□□□□ -0.45
PTCH1-207ENST00000429896 ZZZ3Q8IYH5 903 aa12.24□□□□□ -0.45
PTCH1-207ENST00000429896 OR52E4Q8NGH9 312 aa12.24□□□□□ -0.45
PTCH1-207ENST00000429896 TSPEARQ8WU66 669 aa12.24□□□□□ -0.45
PTCH1-207ENST00000429896 EPYCQ99645 322 aa12.24□□□□□ -0.45
PTCH1-207ENST00000429896 RNF215Q9Y6U7 377 aa12.24□□□□□ -0.45
PTCH1-207ENST00000429896 TLX3O43711 291 aaPredicted RBP12.23□□□□□ -0.45
PTCH1-207ENST00000429896 OR12D1P0DN82 309 aa12.23□□□□□ -0.45
PTCH1-207ENST00000429896 GCAP28676 217 aa12.23□□□□□ -0.45
PTCH1-207ENST00000429896 SLC6A9P48067 706 aa12.23□□□□□ -0.45
PTCH1-207ENST00000429896 EEF1A2Q05639 463 aaKnown RBP12.23□□□□□ -0.45
PTCH1-207ENST00000429896 NNATQ16517 81 aa12.23□□□□□ -0.45
PTCH1-207ENST00000429896 KBTBD8Q8NFY9 601 aa12.23□□□□□ -0.45
PTCH1-207ENST00000429896 GPATCH1Q9BRR8 931 aaKnown RBP12.23□□□□□ -0.45
PTCH1-207ENST00000429896 B3GNT4Q9C0J1 378 aa12.23□□□□□ -0.45
PTCH1-207ENST00000429896 EBF2Q9HAK2 575 aa12.23□□□□□ -0.45
PTCH1-207ENST00000429896 TAS2R1Q9NYW7 299 aa12.23□□□□□ -0.45
PTCH1-207ENST00000429896 A8MVJ9 347 aa12.23□□□□□ -0.45
PTCH1-207ENST00000429896 SCGB1D2O95969 90 aa12.23□□□□□ -0.45
PTCH1-207ENST00000429896 AK1P00568 194 aa12.23□□□□□ -0.45
PTCH1-207ENST00000429896 GPIP06744 558 aa12.23□□□□□ -0.45
PTCH1-207ENST00000429896 CDK9P50750 372 aaKnown RBP12.23□□□□□ -0.45
PTCH1-207ENST00000429896 NR0B1P51843 470 aaKnown RBP12.23□□□□□ -0.45
PTCH1-207ENST00000429896 GPR19Q15760 415 aa12.23□□□□□ -0.45
PTCH1-207ENST00000429896 PHTF2Q8N3S3 785 aa12.23□□□□□ -0.45
PTCH1-207ENST00000429896 OR51Q1Q8NH59 317 aa12.23□□□□□ -0.45
PTCH1-207ENST00000429896 RAB8BQ92930 207 aa12.23□□□□□ -0.45
PTCH1-207ENST00000429896 CHCHD6Q9BRQ6 235 aa12.23□□□□□ -0.45
PTCH1-207ENST00000429896 TWSG1Q9GZX9 223 aa12.23□□□□□ -0.45
PTCH1-207ENST00000429896 FANCFQ9NPI8 374 aa12.23□□□□□ -0.45
PTCH1-207ENST00000429896 HPF1Q9NWY4 346 aa12.23□□□□□ -0.45
PTCH1-207ENST00000429896 RSL24D1Q9UHA3 163 aaKnown RBP12.23□□□□□ -0.45
PTCH1-207ENST00000429896 ARID2Q68CP9 1835 aa12.23□□□□□ -0.45
PTCH1-207ENST00000429896 A0A0X1KG70 313 aa12.23□□□□□ -0.45
PTCH1-207ENST00000429896 RIIAD1A6NNX1 92 aa12.23□□□□□ -0.45
PTCH1-207ENST00000429896 SLC19A1P41440 591 aa12.23□□□□□ -0.45
PTCH1-207ENST00000429896 RAB15P59190 212 aa12.23□□□□□ -0.45
PTCH1-207ENST00000429896 RCBTB1Q8NDN9 531 aa12.23□□□□□ -0.45
PTCH1-207ENST00000429896 TTTY10Q9BZA0 68 aa12.23□□□□□ -0.45
PTCH1-207ENST00000429896 OR52A5Q9H2C5 316 aa12.23□□□□□ -0.45
PTCH1-207ENST00000429896 EBF1Q9UH73 591 aa12.23□□□□□ -0.45
PTCH1-207ENST00000429896 IFT52Q9Y366 437 aa12.23□□□□□ -0.45
PTCH1-207ENST00000429896 CDC14CA4D256 554 aa12.23□□□□□ -0.45
PTCH1-207ENST00000429896 SCO2O43819 266 aa12.23□□□□□ -0.45
PTCH1-207ENST00000429896 CDK4P11802 303 aa12.23□□□□□ -0.45
PTCH1-207ENST00000429896 DDCP20711 480 aa12.23□□□□□ -0.45
PTCH1-207ENST00000429896 CAPZBP47756 277 aa12.23□□□□□ -0.45
PTCH1-207ENST00000429896 ALDH3A2P51648 485 aa12.23□□□□□ -0.45
PTCH1-207ENST00000429896 EPHA4P54764 986 aa12.23□□□□□ -0.45
PTCH1-207ENST00000429896 SBSNQ6UWP8 590 aa12.23□□□□□ -0.45
PTCH1-207ENST00000429896 LINGO2Q7L985 606 aa12.23□□□□□ -0.45
PTCH1-207ENST00000429896 FOXRED2Q8IWF2 684 aa12.23□□□□□ -0.45
PTCH1-207ENST00000429896 PHF12Q96QT6 1004 aa12.23□□□□□ -0.45
PTCH1-207ENST00000429896 WASH6PQ9NQA3 447 aa12.23□□□□□ -0.45
PTCH1-207ENST00000429896 KCND3Q9UK17 655 aa12.23□□□□□ -0.45
PTCH1-207ENST00000429896 SNNO75324 88 aaPredicted RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms