RNA–Protein interactions for RNA: ENST00000429629.6

GARNL3-204, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-204ENST00000429629 NAGAP17050 411 aa13.86□□□□□ -0.19
GARNL3-204ENST00000429629 GPX3P22352 226 aa13.86□□□□□ -0.19
GARNL3-204ENST00000429629 ADSLP30566 484 aaPredicted RBP13.86□□□□□ -0.19
GARNL3-204ENST00000429629 SSTR4P31391 388 aa13.86□□□□□ -0.19
GARNL3-204ENST00000429629 LSP1P33241 339 aa13.86□□□□□ -0.19
GARNL3-204ENST00000429629 HLCSP50747 726 aa13.86□□□□□ -0.19
GARNL3-204ENST00000429629 ARFIP2P53365 341 aa13.86□□□□□ -0.19
GARNL3-204ENST00000429629 WNT3P56703 355 aa13.86□□□□□ -0.19
GARNL3-204ENST00000429629 LTB4RQ15722 352 aa13.86□□□□□ -0.19
GARNL3-204ENST00000429629 B3GNTL1Q67FW5 361 aaPredicted RBP13.86□□□□□ -0.19
GARNL3-204ENST00000429629 ANKRD26P1Q6NSI1 321 aa13.86□□□□□ -0.19
GARNL3-204ENST00000429629 CGB2Q6NT52 195 aa13.86□□□□□ -0.19
GARNL3-204ENST00000429629 FAM180BQ6P0A1 224 aa13.86□□□□□ -0.19
GARNL3-204ENST00000429629 BHLHB9Q6PI77 547 aa13.86□□□□□ -0.19
GARNL3-204ENST00000429629 Q6ZS92 163 aa13.86□□□□□ -0.19
GARNL3-204ENST00000429629 ZNF551Q7Z340 670 aaPredicted RBP13.86□□□□□ -0.19
GARNL3-204ENST00000429629 CPSF7Q8N684 471 aaKnown RBP13.86□□□□□ -0.19
GARNL3-204ENST00000429629 OR7G2Q8NG99 324 aa13.86□□□□□ -0.19
GARNL3-204ENST00000429629 GOT1L1Q8NHS2 421 aaPredicted RBP13.86□□□□□ -0.19
GARNL3-204ENST00000429629 C16orf52Q8NHV5 167 aa13.86□□□□□ -0.19
GARNL3-204ENST00000429629 TSPEARQ8WU66 669 aa13.86□□□□□ -0.19
GARNL3-204ENST00000429629 HOXB13Q92826 284 aaPredicted RBP13.86□□□□□ -0.19
GARNL3-204ENST00000429629 ADIPOR1Q96A54 375 aa13.86□□□□□ -0.19
GARNL3-204ENST00000429629 CIDECQ96AQ7 238 aaPredicted RBP13.86□□□□□ -0.19
GARNL3-204ENST00000429629 SGCZQ96LD1 299 aa13.86□□□□□ -0.19
GARNL3-204ENST00000429629 TEX37Q96LM6 180 aa13.86□□□□□ -0.19
GARNL3-204ENST00000429629 RILPQ96NA2 401 aa13.86□□□□□ -0.19
GARNL3-204ENST00000429629 WWTR1Q9GZV5 400 aa13.86□□□□□ -0.19
GARNL3-204ENST00000429629 PCDHGB4Q9UN71 923 aa13.86□□□□□ -0.19
GARNL3-204ENST00000429629 ATMQ13315 3056 aa13.85□□□□□ -0.19
GARNL3-204ENST00000429629 FAM234BA2RU67 622 aa13.85□□□□□ -0.19
GARNL3-204ENST00000429629 OR5H15A6NDH6 313 aa13.85□□□□□ -0.19
GARNL3-204ENST00000429629 TO15178 435 aa13.85□□□□□ -0.19
GARNL3-204ENST00000429629 EMC8O43402 210 aa13.85□□□□□ -0.19
GARNL3-204ENST00000429629 PRKNO60260 465 aaPredicted RBP13.85□□□□□ -0.19
GARNL3-204ENST00000429629 ITGA10O75578 1167 aa13.85□□□□□ -0.19
GARNL3-204ENST00000429629 PDGFAP04085 211 aa13.85□□□□□ -0.19
GARNL3-204ENST00000429629 IL12AP29459 219 aa13.85□□□□□ -0.19
GARNL3-204ENST00000429629 GPC1P35052 558 aa13.85□□□□□ -0.19
GARNL3-204ENST00000429629 CYB561P49447 251 aa13.85□□□□□ -0.19
GARNL3-204ENST00000429629 PHC1P78364 1004 aa13.85□□□□□ -0.19
GARNL3-204ENST00000429629 PRR5P85299 388 aa13.85□□□□□ -0.19
GARNL3-204ENST00000429629 RAPSNQ13702 412 aa13.85□□□□□ -0.19
GARNL3-204ENST00000429629 SQLEQ14534 574 aa13.85□□□□□ -0.19
GARNL3-204ENST00000429629 TLR1Q15399 786 aa13.85□□□□□ -0.19
GARNL3-204ENST00000429629 PGS1Q32NB8 556 aa13.85□□□□□ -0.19
GARNL3-204ENST00000429629 FAM174BQ3ZCQ3 159 aa13.85□□□□□ -0.19
GARNL3-204ENST00000429629 SPANXN4Q5MJ08 99 aa13.85□□□□□ -0.19
GARNL3-204ENST00000429629 HLA-DQA1Q5Y7H0 255 aa13.85□□□□□ -0.19
GARNL3-204ENST00000429629 OPN5Q6U736 354 aa13.85□□□□□ -0.19
GARNL3-204ENST00000429629 TAGAPQ8N103 731 aa13.85□□□□□ -0.19
GARNL3-204ENST00000429629 OR52R1Q8NGF1 315 aa13.85□□□□□ -0.19
GARNL3-204ENST00000429629 SLC22A8Q8TCC7 542 aa13.85□□□□□ -0.19
GARNL3-204ENST00000429629 SFXN5Q8TD22 340 aa13.85□□□□□ -0.19
GARNL3-204ENST00000429629 KAT2AQ92830 837 aa13.85□□□□□ -0.19
GARNL3-204ENST00000429629 HSPBAP1Q96EW2 488 aa13.85□□□□□ -0.19
GARNL3-204ENST00000429629 VSTM2LQ96N03 204 aa13.85□□□□□ -0.19
GARNL3-204ENST00000429629 CCDC115Q96NT0 180 aa13.85□□□□□ -0.19
GARNL3-204ENST00000429629 BTBD9Q96Q07 612 aa13.85□□□□□ -0.19
GARNL3-204ENST00000429629 UTP23Q9BRU9 249 aaKnown RBP13.85□□□□□ -0.19
GARNL3-204ENST00000429629 ZNF385DQ9H6B1 395 aa13.85□□□□□ -0.19
GARNL3-204ENST00000429629 DDX18Q9NVP1 670 aaKnown RBP13.85□□□□□ -0.19
GARNL3-204ENST00000429629 GIN1Q9NXP7 522 aa13.85□□□□□ -0.19
GARNL3-204ENST00000429629 BCAP29Q9UHQ4 241 aa13.85□□□□□ -0.19
GARNL3-204ENST00000429629 GPR55Q9Y2T6 319 aaPredicted RBP13.85□□□□□ -0.19
GARNL3-204ENST00000429629 HEMK1Q9Y5R4 338 aaPredicted RBP13.85□□□□□ -0.19
GARNL3-204ENST00000429629 TRAV17A0A0B4J275 112 aa13.84□□□□□ -0.19
GARNL3-204ENST00000429629 CAPN14A8MX76 684 aa13.84□□□□□ -0.19
GARNL3-204ENST00000429629 K7EM74 188 aa13.84□□□□□ -0.19
GARNL3-204ENST00000429629 WDPCPO95876 746 aa13.84□□□□□ -0.19
GARNL3-204ENST00000429629 CD96P40200 585 aa13.84□□□□□ -0.19
GARNL3-204ENST00000429629 CASRP41180 1078 aa13.84□□□□□ -0.19
GARNL3-204ENST00000429629 MAP3K8P41279 467 aa13.84□□□□□ -0.19
GARNL3-204ENST00000429629 MC3RP41968 323 aa13.84□□□□□ -0.19
GARNL3-204ENST00000429629 MAGEA8P43361 318 aa13.84□□□□□ -0.19
GARNL3-204ENST00000429629 ZFP36L2P47974 494 aaKnown RBP13.84□□□□□ -0.19
GARNL3-204ENST00000429629 TNFSF10P50591 281 aa13.84□□□□□ -0.19
GARNL3-204ENST00000429629 SSR4P51571 173 aa13.84□□□□□ -0.19
GARNL3-204ENST00000429629 POLR2JP52435 117 aaKnown RBP13.84□□□□□ -0.19
GARNL3-204ENST00000429629 MRPS35P82673 323 aaKnown RBP13.84□□□□□ -0.19
GARNL3-204ENST00000429629 KLRB1Q12918 225 aa13.84□□□□□ -0.19
GARNL3-204ENST00000429629 DUSP8Q13202 625 aa13.84□□□□□ -0.19
GARNL3-204ENST00000429629 TUBA3CQ13748 450 aa13.84□□□□□ -0.19
GARNL3-204ENST00000429629 OR4F3Q6IEY1 312 aa13.84□□□□□ -0.19
GARNL3-204ENST00000429629 RPUSD3Q6P087 351 aaKnown RBP13.84□□□□□ -0.19
GARNL3-204ENST00000429629 TUBA3EQ6PEY2 450 aa13.84□□□□□ -0.19
GARNL3-204ENST00000429629 BLOC1S3Q6QNY0 202 aa13.84□□□□□ -0.19
GARNL3-204ENST00000429629 TMEM107Q6UX40 140 aa13.84□□□□□ -0.19
GARNL3-204ENST00000429629 LINC00696Q6ZRV3 163 aa13.84□□□□□ -0.19
GARNL3-204ENST00000429629 BEST3Q8N1M1 668 aa13.84□□□□□ -0.19
GARNL3-204ENST00000429629 AMER2Q8N7J2 671 aa13.84□□□□□ -0.19
GARNL3-204ENST00000429629 RBMXL3Q8N7X1 1067 aaKnown RBP13.84□□□□□ -0.19
GARNL3-204ENST00000429629 SLC39A7Q92504 469 aa13.84□□□□□ -0.19
GARNL3-204ENST00000429629 PNPLA2Q96AD5 504 aa13.84□□□□□ -0.19
GARNL3-204ENST00000429629 LCORQ96JN0 433 aaPredicted RBP13.84□□□□□ -0.19
GARNL3-204ENST00000429629 OR52E6Q96RD3 313 aa13.84□□□□□ -0.19
GARNL3-204ENST00000429629 RASL10BQ96S79 203 aa13.84□□□□□ -0.19
GARNL3-204ENST00000429629 TMEM120AQ9BXJ8 343 aa13.84□□□□□ -0.19
GARNL3-204ENST00000429629 NSRP1Q9H0G5 558 aaKnown RBP13.84□□□□□ -0.19
GARNL3-204ENST00000429629 ZBTB20Q9HC78 741 aaPredicted RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms