RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 ACOT9Q9Y305 439 aa15.1■□□□□ 0.01
VARS-216ENST00000428445 UTP11Q9Y3A2 253 aaKnown RBP15.1■□□□□ 0.01
VARS-216ENST00000428445 MED12LQ86YW9 2145 aa15.1■□□□□ 0.01
VARS-216ENST00000428445 CAPN14A8MX76 684 aa15.09■□□□□ 0.01
VARS-216ENST00000428445 OR7A17O14581 309 aa15.09■□□□□ 0.01
VARS-216ENST00000428445 SNX4O95219 450 aa15.09■□□□□ 0.01
VARS-216ENST00000428445 ABCB1P08183 1280 aaPredicted RBP15.09■□□□□ 0.01
VARS-216ENST00000428445 ABCD3P28288 659 aa15.09■□□□□ 0.01
VARS-216ENST00000428445 PTPN6P29350 595 aa15.09■□□□□ 0.01
VARS-216ENST00000428445 STX2P32856 288 aa15.09■□□□□ 0.01
VARS-216ENST00000428445 PEX19P40855 299 aa15.09■□□□□ 0.01
VARS-216ENST00000428445 PTGDSP41222 190 aa15.09■□□□□ 0.01
VARS-216ENST00000428445 MAGEA4P43358 317 aa15.09■□□□□ 0.01
VARS-216ENST00000428445 PHEXP78562 749 aa15.09■□□□□ 0.01
VARS-216ENST00000428445 SRYQ05066 204 aa15.09■□□□□ 0.01
VARS-216ENST00000428445 CUL3Q13618 768 aa15.09■□□□□ 0.01
VARS-216ENST00000428445 EXOSC7Q15024 291 aaKnown RBP15.09■□□□□ 0.01
VARS-216ENST00000428445 FAM83EQ2M2I3 478 aa15.09■□□□□ 0.01
VARS-216ENST00000428445 UBAP2Q5T6F2 1119 aaKnown RBP15.09■□□□□ 0.01
VARS-216ENST00000428445 ANGPTL8Q6UXH0 198 aa15.09■□□□□ 0.01
VARS-216ENST00000428445 RPS27LQ71UM5 84 aaKnown RBP15.09■□□□□ 0.01
VARS-216ENST00000428445 LUZP2Q86TE4 346 aa15.09■□□□□ 0.01
VARS-216ENST00000428445 GALNT12Q8IXK2 581 aa15.09■□□□□ 0.01
VARS-216ENST00000428445 PM20D2Q8IYS1 436 aa15.09■□□□□ 0.01
VARS-216ENST00000428445 OR4K14Q8NGD5 310 aa15.09■□□□□ 0.01
VARS-216ENST00000428445 OR52B6Q8NGF0 335 aa15.09■□□□□ 0.01
VARS-216ENST00000428445 NTNG2Q96CW9 530 aa15.09■□□□□ 0.01
VARS-216ENST00000428445 REPS1Q96D71 796 aa15.09■□□□□ 0.01
VARS-216ENST00000428445 MBD6Q96DN6 1003 aa15.09■□□□□ 0.01
VARS-216ENST00000428445 HSPBAP1Q96EW2 488 aa15.09■□□□□ 0.01
VARS-216ENST00000428445 LRRC46Q96FV0 321 aa15.09■□□□□ 0.01
VARS-216ENST00000428445 TUBA1CQ9BQE3 449 aa15.09■□□□□ 0.01
VARS-216ENST00000428445 NOL11Q9H8H0 719 aaKnown RBP15.09■□□□□ 0.01
VARS-216ENST00000428445 DNHD1Q96M86 4753 aa15.08■□□□□ 0.01
VARS-216ENST00000428445 MBD3L4A6NDZ8 208 aaPredicted RBP15.08■□□□□ 0
VARS-216ENST00000428445 MBD3L3A6NE82 208 aaPredicted RBP15.08■□□□□ 0
VARS-216ENST00000428445 MBD3L5A6NJ08 208 aaPredicted RBP15.08■□□□□ 0
VARS-216ENST00000428445 CD8B2A6NJW9 211 aa15.08■□□□□ 0
VARS-216ENST00000428445 NME6O75414 186 aaPredicted RBP15.08■□□□□ 0
VARS-216ENST00000428445 GPX3P22352 226 aa15.08■□□□□ 0
VARS-216ENST00000428445 FEN1P39748 380 aaKnown RBP15.08■□□□□ 0
VARS-216ENST00000428445 ARL1P40616 181 aaPredicted RBP15.08■□□□□ 0
VARS-216ENST00000428445 STARP49675 285 aa15.08■□□□□ 0
VARS-216ENST00000428445 ALDH18A1P54886 795 aaKnown RBP15.08■□□□□ 0
VARS-216ENST00000428445 DUSP2Q05923 314 aa15.08■□□□□ 0
VARS-216ENST00000428445 SGO1Q5FBB7 561 aa15.08■□□□□ 0
VARS-216ENST00000428445 TIGD3Q6B0B8 471 aa15.08■□□□□ 0
VARS-216ENST00000428445 OR52E8Q6IFG1 317 aa15.08■□□□□ 0
VARS-216ENST00000428445 NUDT13Q86X67 352 aa15.08■□□□□ 0
VARS-216ENST00000428445 KRTAP1-3Q8IUG1 177 aa15.08■□□□□ 0
VARS-216ENST00000428445 PLD6Q8N2A8 252 aaKnown RBP15.08■□□□□ 0
VARS-216ENST00000428445 L3MBTL4Q8NA19 623 aa15.08■□□□□ 0
VARS-216ENST00000428445 ADCY4Q8NFM4 1077 aa15.08■□□□□ 0
VARS-216ENST00000428445 OR1J4Q8NGS1 313 aa15.08■□□□□ 0
VARS-216ENST00000428445 MBD3L2Q8NHZ7 208 aaPredicted RBP15.08■□□□□ 0
VARS-216ENST00000428445 FBXO25Q8TCJ0 367 aa15.08■□□□□ 0
VARS-216ENST00000428445 ANP32BQ92688 251 aaKnown RBP15.08■□□□□ 0
VARS-216ENST00000428445 TMEM41AQ96HV5 264 aa15.08■□□□□ 0
VARS-216ENST00000428445 NSUN5Q96P11 429 aaKnown RBP15.08■□□□□ 0
VARS-216ENST00000428445 GPR78Q96P69 363 aa15.08■□□□□ 0
VARS-216ENST00000428445 MRPL1Q9BYD6 325 aaKnown RBP15.08■□□□□ 0
VARS-216ENST00000428445 BRINP2Q9C0B6 783 aa15.08■□□□□ 0
VARS-216ENST00000428445 METTL7AQ9H8H3 244 aa15.08■□□□□ 0
VARS-216ENST00000428445 SERHLQ9NQF3 203 aa15.08■□□□□ 0
VARS-216ENST00000428445 JKAMPQ9P055 326 aa15.08■□□□□ 0
VARS-216ENST00000428445 BCAP29Q9UHQ4 241 aa15.08■□□□□ 0
VARS-216ENST00000428445 MAPRE3Q9UPY8 281 aa15.08■□□□□ 0
VARS-216ENST00000428445 TNPO3Q9Y5L0 923 aaKnown RBP15.08■□□□□ 0
VARS-216ENST00000428445 IKBKGQ9Y6K9 419 aa15.08■□□□□ 0
VARS-216ENST00000428445 A0A087X1B8 175 aa15.07■□□□□ 0
VARS-216ENST00000428445 CLCA1A8K7I4 914 aa15.07■□□□□ 0
VARS-216ENST00000428445 FOXE1O00358 373 aaPredicted RBP15.07■□□□□ 0
VARS-216ENST00000428445 ICOSLGO75144 302 aa15.07■□□□□ 0
VARS-216ENST00000428445 TMIGD3P0DMS9 266 aaPredicted RBP15.07■□□□□ 0
VARS-216ENST00000428445 CPMP14384 443 aa15.07■□□□□ 0
VARS-216ENST00000428445 DRD2P14416 443 aa15.07■□□□□ 0
VARS-216ENST00000428445 TCEA1P23193 301 aaKnown RBP15.07■□□□□ 0
VARS-216ENST00000428445 CNTFP26441 200 aa15.07■□□□□ 0
VARS-216ENST00000428445 NRG3P56975 720 aa15.07■□□□□ 0
VARS-216ENST00000428445 LTBQ06643 244 aa15.07■□□□□ 0
VARS-216ENST00000428445 MGAT2Q10469 447 aa15.07■□□□□ 0
VARS-216ENST00000428445 ACAP2Q15057 778 aa15.07■□□□□ 0
VARS-216ENST00000428445 PCBP2Q15366 365 aaKnown RBP eCLIP15.07■□□□□ 0
VARS-216ENST00000428445 UAP1Q16222 522 aaPredicted RBP15.07■□□□□ 0
VARS-216ENST00000428445 NHSL2Q5HYW2 709 aa15.07■□□□□ 0
VARS-216ENST00000428445 ZDHHC24Q6UX98 284 aa15.07■□□□□ 0
VARS-216ENST00000428445 CAMKMTQ7Z624 323 aa15.07■□□□□ 0
VARS-216ENST00000428445 HGDQ93099 445 aa15.07■□□□□ 0
VARS-216ENST00000428445 PHF21BQ96EK2 531 aa15.07■□□□□ 0
VARS-216ENST00000428445 YIPF4Q9BSR8 244 aa15.07■□□□□ 0
VARS-216ENST00000428445 RBM24Q9BX46 236 aaKnown RBP15.07■□□□□ 0
VARS-216ENST00000428445 ITPAQ9BY32 194 aa15.07■□□□□ 0
VARS-216ENST00000428445 RAB17Q9H0T7 212 aa15.07■□□□□ 0
VARS-216ENST00000428445 CALHM2Q9HA72 323 aa15.07■□□□□ 0
VARS-216ENST00000428445 FARSBQ9NSD9 589 aaKnown RBP15.07■□□□□ 0
VARS-216ENST00000428445 FOXD3Q9UJU5 478 aaPredicted RBP15.07■□□□□ 0
VARS-216ENST00000428445 PYCARDQ9ULZ3 195 aa15.07■□□□□ 0
VARS-216ENST00000428445 A0A096LPK6 155 aa15.06■□□□□ 0
VARS-216ENST00000428445 A0A1B0GTL3 188 aa15.06■□□□□ 0
VARS-216ENST00000428445 PPM1BO75688 479 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms