RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 RHOQP17081 205 aa15.24■□□□□ 0.03
C9orf3-206ENST00000428313 NPR2P20594 1047 aa15.24■□□□□ 0.03
C9orf3-206ENST00000428313 PRKAR1BP31321 381 aa15.24■□□□□ 0.03
C9orf3-206ENST00000428313 DEFA5Q01523 94 aa15.24■□□□□ 0.03
C9orf3-206ENST00000428313 RAB40BQ12829 278 aa15.24■□□□□ 0.03
C9orf3-206ENST00000428313 GK2Q14410 553 aaPredicted RBP15.24■□□□□ 0.03
C9orf3-206ENST00000428313 SMAD2Q15796 467 aaKnown RBP15.24■□□□□ 0.03
C9orf3-206ENST00000428313 SWI5Q1ZZU3 235 aa15.24■□□□□ 0.03
C9orf3-206ENST00000428313 XKR6Q5GH73 641 aa15.24■□□□□ 0.03
C9orf3-206ENST00000428313 NOXRED1Q6NXP6 359 aa15.24■□□□□ 0.03
C9orf3-206ENST00000428313 GLT6D1Q7Z4J2 308 aa15.24■□□□□ 0.03
C9orf3-206ENST00000428313 WDR53Q7Z5U6 358 aaPredicted RBP15.24■□□□□ 0.03
C9orf3-206ENST00000428313 PLEKHH3Q7Z736 793 aa15.24■□□□□ 0.03
C9orf3-206ENST00000428313 NAGSQ8N159 534 aa15.24■□□□□ 0.03
C9orf3-206ENST00000428313 ZNF527Q8NB42 609 aa15.24■□□□□ 0.03
C9orf3-206ENST00000428313 OR52N1Q8NH53 320 aa15.24■□□□□ 0.03
C9orf3-206ENST00000428313 UPF1Q92900 1129 aaKnown RBP eCLIP15.24■□□□□ 0.03
C9orf3-206ENST00000428313 APIPQ96GX9 242 aa15.24■□□□□ 0.03
C9orf3-206ENST00000428313 APOLD1Q96LR9 279 aa15.24■□□□□ 0.03
C9orf3-206ENST00000428313 C12orf66Q96MD2 445 aa15.24■□□□□ 0.03
C9orf3-206ENST00000428313 P2RY12Q9H244 342 aa15.24■□□□□ 0.03
C9orf3-206ENST00000428313 GSN-AS1Q9NRJ2 163 aa15.24■□□□□ 0.03
C9orf3-206ENST00000428313 SPATA6Q9NWH7 488 aaPredicted RBP15.24■□□□□ 0.03
C9orf3-206ENST00000428313 PIM2Q9P1W9 311 aa15.24■□□□□ 0.03
C9orf3-206ENST00000428313 RPS6KB2Q9UBS0 482 aa15.24■□□□□ 0.03
C9orf3-206ENST00000428313 CHST2Q9Y4C5 530 aa15.24■□□□□ 0.03
C9orf3-206ENST00000428313 SERTM1A2A2V5 107 aa15.24■□□□□ 0.03
C9orf3-206ENST00000428313 CARNS1A5YM72 827 aa15.24■□□□□ 0.03
C9orf3-206ENST00000428313 C2orf78A6NCI8 922 aa15.24■□□□□ 0.03
C9orf3-206ENST00000428313 C2orf81A6NN90 581 aa15.24■□□□□ 0.03
C9orf3-206ENST00000428313 LRRTM2O43300 516 aa15.24■□□□□ 0.03
C9orf3-206ENST00000428313 NFATC1O95644 943 aa15.24■□□□□ 0.03
C9orf3-206ENST00000428313 GABRA1P14867 456 aa15.24■□□□□ 0.03
C9orf3-206ENST00000428313 ATP5A1P25705 553 aaKnown RBP15.24■□□□□ 0.03
C9orf3-206ENST00000428313 S100A11P31949 105 aa15.24■□□□□ 0.03
C9orf3-206ENST00000428313 RFC3P40938 356 aa15.24■□□□□ 0.03
C9orf3-206ENST00000428313 SRP9P49458 86 aaKnown RBP15.24■□□□□ 0.03
C9orf3-206ENST00000428313 FGL2Q14314 439 aa15.24■□□□□ 0.03
C9orf3-206ENST00000428313 HBMQ6B0K9 141 aa15.24■□□□□ 0.03
C9orf3-206ENST00000428313 SYT12Q8IV01 421 aa15.24■□□□□ 0.03
C9orf3-206ENST00000428313 BEST4Q8NFU0 473 aa15.24■□□□□ 0.03
C9orf3-206ENST00000428313 OR5M9Q8NGP3 310 aa15.24■□□□□ 0.03
C9orf3-206ENST00000428313 BCL2L14Q9BZR8 327 aa15.24■□□□□ 0.03
C9orf3-206ENST00000428313 SEMA4CQ9C0C4 833 aa15.24■□□□□ 0.03
C9orf3-206ENST00000428313 CSNK1G1Q9HCP0 422 aa15.24■□□□□ 0.03
C9orf3-206ENST00000428313 SEMA3GQ9NS98 782 aa15.24■□□□□ 0.03
C9orf3-206ENST00000428313 TMEM248Q9NWD8 314 aa15.24■□□□□ 0.03
C9orf3-206ENST00000428313 ASB6Q9NWX5 421 aa15.24■□□□□ 0.03
C9orf3-206ENST00000428313 SEC14L3Q9UDX4 400 aa15.24■□□□□ 0.03
C9orf3-206ENST00000428313 A0A0U1RQF3 1178 aa15.23■□□□□ 0.03
C9orf3-206ENST00000428313 TMEM82A0PJX8 343 aa15.23■□□□□ 0.03
C9orf3-206ENST00000428313 RRN3P2A6NIE6 340 aa15.23■□□□□ 0.03
C9orf3-206ENST00000428313 PCDH7O60245 1069 aa15.23■□□□□ 0.03
C9orf3-206ENST00000428313 PEX14O75381 377 aa15.23■□□□□ 0.03
C9orf3-206ENST00000428313 HPXP02790 462 aa15.23■□□□□ 0.03
C9orf3-206ENST00000428313 MC4RP32245 332 aa15.23■□□□□ 0.03
C9orf3-206ENST00000428313 CAPZA2P47755 286 aa15.23■□□□□ 0.03
C9orf3-206ENST00000428313 RAP2BP61225 183 aa15.23■□□□□ 0.03
C9orf3-206ENST00000428313 SOX4Q06945 474 aaPredicted RBP15.23■□□□□ 0.03
C9orf3-206ENST00000428313 GANABQ14697 944 aaKnown RBP15.23■□□□□ 0.03
C9orf3-206ENST00000428313 CPSF6Q16630 551 aaKnown RBP eCLIP15.23■□□□□ 0.03
C9orf3-206ENST00000428313 SYT14P1Q58G82 188 aa15.23■□□□□ 0.03
C9orf3-206ENST00000428313 XKR4Q5GH76 650 aa15.23■□□□□ 0.03
C9orf3-206ENST00000428313 SLC22A10Q63ZE4 541 aa15.23■□□□□ 0.03
C9orf3-206ENST00000428313 BCDIN3DQ7Z5W3 292 aaKnown RBP15.23■□□□□ 0.03
C9orf3-206ENST00000428313 FAM71CQ8NEG0 241 aa15.23■□□□□ 0.03
C9orf3-206ENST00000428313 HASPINQ8TF76 798 aa15.23■□□□□ 0.03
C9orf3-206ENST00000428313 SGK3Q96BR1 496 aa15.23■□□□□ 0.03
C9orf3-206ENST00000428313 IER2Q9BTL4 223 aa15.23■□□□□ 0.03
C9orf3-206ENST00000428313 ZNF768Q9H5H4 540 aaKnown RBP15.23■□□□□ 0.03
C9orf3-206ENST00000428313 C11orf49Q9H6J7 331 aa15.23■□□□□ 0.03
C9orf3-206ENST00000428313 PRDM5Q9NQX1 630 aaPredicted RBP15.23■□□□□ 0.03
C9orf3-206ENST00000428313 NPDC1Q9NQX5 325 aaPredicted RBP15.23■□□□□ 0.03
C9orf3-206ENST00000428313 OR6C2Q9NZP2 312 aa15.23■□□□□ 0.03
C9orf3-206ENST00000428313 CA5BQ9Y2D0 317 aa15.23■□□□□ 0.03
C9orf3-206ENST00000428313 DENND4AQ7Z401 1863 aa15.23■□□□□ 0.03
C9orf3-206ENST00000428313 TRPM7Q96QT4 1865 aa15.23■□□□□ 0.03
C9orf3-206ENST00000428313 EIF1BO60739 113 aaKnown RBP15.23■□□□□ 0.03
C9orf3-206ENST00000428313 EIF4EP06730 217 aaKnown RBP15.23■□□□□ 0.03
C9orf3-206ENST00000428313 ACP2P11117 423 aa15.23■□□□□ 0.03
C9orf3-206ENST00000428313 RAB3BP20337 219 aa15.23■□□□□ 0.03
C9orf3-206ENST00000428313 EIF1P41567 113 aaKnown RBP15.23■□□□□ 0.03
C9orf3-206ENST00000428313 RGS4P49798 205 aa15.23■□□□□ 0.03
C9orf3-206ENST00000428313 HMGCS2P54868 508 aa15.23■□□□□ 0.03
C9orf3-206ENST00000428313 MC2RQ01718 297 aa15.23■□□□□ 0.03
C9orf3-206ENST00000428313 CXCL9Q07325 125 aa15.23■□□□□ 0.03
C9orf3-206ENST00000428313 UBXN2BQ14CS0 331 aa15.23■□□□□ 0.03
C9orf3-206ENST00000428313 CRB2Q5IJ48 1285 aa15.23■□□□□ 0.03
C9orf3-206ENST00000428313 HECTD3Q5T447 861 aa15.23■□□□□ 0.03
C9orf3-206ENST00000428313 FCRLBQ6BAA4 426 aa15.23■□□□□ 0.03
C9orf3-206ENST00000428313 LRRTM3Q86VH5 581 aa15.23■□□□□ 0.03
C9orf3-206ENST00000428313 SIAH3Q8IW03 269 aa15.23■□□□□ 0.03
C9orf3-206ENST00000428313 BMPERQ8N8U9 685 aa15.23■□□□□ 0.03
C9orf3-206ENST00000428313 ZNF485Q8NCK3 441 aa15.23■□□□□ 0.03
C9orf3-206ENST00000428313 SFT2D1Q8WV19 159 aa15.23■□□□□ 0.03
C9orf3-206ENST00000428313 FUBP3Q96I24 572 aaKnown RBP eCLIP15.23■□□□□ 0.03
C9orf3-206ENST00000428313 ZNF582Q96NG8 517 aaPredicted RBP15.23■□□□□ 0.03
C9orf3-206ENST00000428313 SAP130Q9H0E3 1048 aa15.23■□□□□ 0.03
C9orf3-206ENST00000428313 GOLGA2P5Q9HBQ8 144 aa15.23■□□□□ 0.03
C9orf3-206ENST00000428313 DCAF16Q9NXF7 216 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms