RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 LRRC25Q8N386 305 aaPredicted RBP16.9■□□□□ 0.3
PSPC1-202ENST00000427943 OR7G1Q8NGA0 311 aa16.9■□□□□ 0.3
PSPC1-202ENST00000427943 RND1Q92730 232 aa16.9■□□□□ 0.3
PSPC1-202ENST00000427943 CNRIP1Q96F85 164 aaPredicted RBP16.9■□□□□ 0.3
PSPC1-202ENST00000427943 APIPQ96GX9 242 aa16.9■□□□□ 0.3
PSPC1-202ENST00000427943 ITPAQ9BY32 194 aa16.9■□□□□ 0.3
PSPC1-202ENST00000427943 PFDN4Q9NQP4 134 aa16.9■□□□□ 0.3
PSPC1-202ENST00000427943 MCM8Q9UJA3 840 aa16.9■□□□□ 0.3
PSPC1-202ENST00000427943 ACAD8Q9UKU7 415 aa16.9■□□□□ 0.3
PSPC1-202ENST00000427943 STK38LQ9Y2H1 464 aa16.9■□□□□ 0.3
PSPC1-202ENST00000427943 GNG14A0A1W2PPG7 69 aa16.89■□□□□ 0.29
PSPC1-202ENST00000427943 NKX2-6A6NCS4 301 aa16.89■□□□□ 0.29
PSPC1-202ENST00000427943 FIGNL2A6NMB9 653 aa16.89■□□□□ 0.29
PSPC1-202ENST00000427943 CAPN14A8MX76 684 aa16.89■□□□□ 0.29
PSPC1-202ENST00000427943 G3V2L1 256 aa16.89■□□□□ 0.29
PSPC1-202ENST00000427943 TP53I11O14683 189 aa16.89■□□□□ 0.29
PSPC1-202ENST00000427943 SUSD5O60279 629 aa16.89■□□□□ 0.29
PSPC1-202ENST00000427943 ENO1P06733 434 aaKnown RBP16.89■□□□□ 0.29
PSPC1-202ENST00000427943 ACVR2AP27037 513 aa16.89■□□□□ 0.29
PSPC1-202ENST00000427943 GDF1P27539 372 aa16.89■□□□□ 0.29
PSPC1-202ENST00000427943 CHRNB4P30926 498 aa16.89■□□□□ 0.29
PSPC1-202ENST00000427943 SOX18P35713 384 aa16.89■□□□□ 0.29
PSPC1-202ENST00000427943 TRPC1P48995 793 aa16.89■□□□□ 0.29
PSPC1-202ENST00000427943 TMED10P49755 219 aaKnown RBP16.89■□□□□ 0.29
PSPC1-202ENST00000427943 FOXA1P55317 472 aa16.89■□□□□ 0.29
PSPC1-202ENST00000427943 PKNOX1P55347 436 aa16.89■□□□□ 0.29
PSPC1-202ENST00000427943 NRG3P56975 720 aa16.89■□□□□ 0.29
PSPC1-202ENST00000427943 TRA2BP62995 288 aaKnown RBP16.89■□□□□ 0.29
PSPC1-202ENST00000427943 MRPS35P82673 323 aaKnown RBP16.89■□□□□ 0.29
PSPC1-202ENST00000427943 BTKQ06187 659 aa16.89■□□□□ 0.29
PSPC1-202ENST00000427943 MGAT2Q10469 447 aa16.89■□□□□ 0.29
PSPC1-202ENST00000427943 MAP4K2Q12851 820 aa16.89■□□□□ 0.29
PSPC1-202ENST00000427943 SPPL2AQ8TCT8 520 aa16.89■□□□□ 0.29
PSPC1-202ENST00000427943 ASB5Q8WWX0 329 aa16.89■□□□□ 0.29
PSPC1-202ENST00000427943 SARAFQ96BY9 339 aa16.89■□□□□ 0.29
PSPC1-202ENST00000427943 RILPQ96NA2 401 aa16.89■□□□□ 0.29
PSPC1-202ENST00000427943 EBPLQ9BY08 206 aa16.89■□□□□ 0.29
PSPC1-202ENST00000427943 MID1IP1Q9NPA3 183 aa16.89■□□□□ 0.29
PSPC1-202ENST00000427943 DCDC2Q9UHG0 476 aa16.89■□□□□ 0.29
PSPC1-202ENST00000427943 UTS2RQ9UKP6 389 aa16.89■□□□□ 0.29
PSPC1-202ENST00000427943 PSME2Q9UL46 239 aa16.89■□□□□ 0.29
PSPC1-202ENST00000427943 DLGAP4Q9Y2H0 992 aa16.89■□□□□ 0.29
PSPC1-202ENST00000427943 PLLPQ9Y342 182 aa16.89■□□□□ 0.29
PSPC1-202ENST00000427943 FAM215AQ9Y5M1 114 aa16.89■□□□□ 0.29
PSPC1-202ENST00000427943 ZNF780BQ9Y6R6 833 aa16.89■□□□□ 0.29
PSPC1-202ENST00000427943 UBFD1O14562 309 aaKnown RBP16.88■□□□□ 0.29
PSPC1-202ENST00000427943 HCN1O60741 890 aa16.88■□□□□ 0.29
PSPC1-202ENST00000427943 CBX7O95931 251 aa16.88■□□□□ 0.29
PSPC1-202ENST00000427943 PROCP04070 461 aa16.88■□□□□ 0.29
PSPC1-202ENST00000427943 MYL2P10916 166 aa16.88■□□□□ 0.29
PSPC1-202ENST00000427943 PCSK2P16519 638 aa16.88■□□□□ 0.29
PSPC1-202ENST00000427943 KRT15P19012 456 aa16.88■□□□□ 0.29
PSPC1-202ENST00000427943 ABCD3P28288 659 aa16.88■□□□□ 0.29
PSPC1-202ENST00000427943 TIA1P31483 386 aaKnown RBP eCLIP16.88■□□□□ 0.29
PSPC1-202ENST00000427943 ACSM2AQ08AH3 577 aa16.88■□□□□ 0.29
PSPC1-202ENST00000427943 TRMT12Q53H54 448 aaKnown RBP16.88■□□□□ 0.29
PSPC1-202ENST00000427943 SPIN4Q56A73 249 aa16.88■□□□□ 0.29
PSPC1-202ENST00000427943 TBCELQ5QJ74 424 aa16.88■□□□□ 0.29
PSPC1-202ENST00000427943 WLSQ5T9L3 541 aa16.88■□□□□ 0.29
PSPC1-202ENST00000427943 TMEM198Q66K66 360 aa16.88■□□□□ 0.29
PSPC1-202ENST00000427943 ACSM2BQ68CK6 577 aa16.88■□□□□ 0.29
PSPC1-202ENST00000427943 DESI1Q6ICB0 168 aa16.88■□□□□ 0.29
PSPC1-202ENST00000427943 ZYG11AQ6WRX3 759 aa16.88■□□□□ 0.29
PSPC1-202ENST00000427943 B3GNT6Q6ZMB0 384 aa16.88■□□□□ 0.29
PSPC1-202ENST00000427943 ZNF295-AS1Q8N0V1 137 aa16.88■□□□□ 0.29
PSPC1-202ENST00000427943 GBP7Q8N8V2 638 aaPredicted RBP16.88■□□□□ 0.29
PSPC1-202ENST00000427943 OR52R1Q8NGF1 315 aa16.88■□□□□ 0.29
PSPC1-202ENST00000427943 EPS8L3Q8TE67 593 aaKnown RBP16.88■□□□□ 0.29
PSPC1-202ENST00000427943 ZNF681Q96N22 645 aa16.88■□□□□ 0.29
PSPC1-202ENST00000427943 UCK2Q9BZX2 261 aa16.88■□□□□ 0.29
PSPC1-202ENST00000427943 C12orf65Q9H3J6 166 aaKnown RBP16.88■□□□□ 0.29
PSPC1-202ENST00000427943 RYDENQ9NUL5 291 aaKnown RBP16.88■□□□□ 0.29
PSPC1-202ENST00000427943 ALKBH4Q9NXW9 302 aa16.88■□□□□ 0.29
PSPC1-202ENST00000427943 B4GALT7Q9UBV7 327 aa16.88■□□□□ 0.29
PSPC1-202ENST00000427943 ZNF639Q9UID6 485 aa16.88■□□□□ 0.29
PSPC1-202ENST00000427943 KIAA1549Q9HCM3 1950 aa16.88■□□□□ 0.29
PSPC1-202ENST00000427943 PDZD2O15018 2839 aa16.88■□□□□ 0.29
PSPC1-202ENST00000427943 TRIM3O75382 744 aaPredicted RBP16.87■□□□□ 0.29
PSPC1-202ENST00000427943 MASP1P48740 699 aa16.87■□□□□ 0.29
PSPC1-202ENST00000427943 RTL6Q6ICC9 239 aa16.87■□□□□ 0.29
PSPC1-202ENST00000427943 MEX3BQ6ZN04 569 aaKnown RBP16.87■□□□□ 0.29
PSPC1-202ENST00000427943 SH2D5Q6ZV89 423 aa16.87■□□□□ 0.29
PSPC1-202ENST00000427943 ACAD11Q709F0 780 aa16.87■□□□□ 0.29
PSPC1-202ENST00000427943 LIX1Q8N485 282 aa16.87■□□□□ 0.29
PSPC1-202ENST00000427943 C17orf47Q8NEP4 570 aa16.87■□□□□ 0.29
PSPC1-202ENST00000427943 OR10Q1Q8NGQ4 319 aa16.87■□□□□ 0.29
PSPC1-202ENST00000427943 CDC26Q8NHZ8 85 aa16.87■□□□□ 0.29
PSPC1-202ENST00000427943 C16orf78Q8WTQ4 265 aa16.87■□□□□ 0.29
PSPC1-202ENST00000427943 EXOSC8Q96B26 276 aaKnown RBP16.87■□□□□ 0.29
PSPC1-202ENST00000427943 CTHRC1Q96CG8 243 aa16.87■□□□□ 0.29
PSPC1-202ENST00000427943 TTYH2Q9BSA4 534 aa16.87■□□□□ 0.29
PSPC1-202ENST00000427943 ANKRA2Q9H9E1 313 aa16.87■□□□□ 0.29
PSPC1-202ENST00000427943 QPCTLQ9NXS2 382 aa16.87■□□□□ 0.29
PSPC1-202ENST00000427943 CSMD1Q96PZ7 3565 aa16.87■□□□□ 0.29
PSPC1-202ENST00000427943 ANKRD33BA6NCL7 494 aa16.86■□□□□ 0.29
PSPC1-202ENST00000427943 PLIN3O60664 434 aa16.86■□□□□ 0.29
PSPC1-202ENST00000427943 GLI4P10075 376 aa16.86■□□□□ 0.29
PSPC1-202ENST00000427943 CASP3P42574 277 aa16.86■□□□□ 0.29
PSPC1-202ENST00000427943 PLCXD2Q0VAA5 305 aa16.86■□□□□ 0.29
PSPC1-202ENST00000427943 SPDYAQ5MJ70 313 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms