RNA–Protein interactions for RNA: ENST00000426546.6

CCDC107-206, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCDC107, Length 1,242 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-206ENST00000426546 C1orf185Q5T7R7 199 aa18.38■□□□□ 0.53
CCDC107-206ENST00000426546 TMEM198Q66K66 360 aa18.38■□□□□ 0.53
CCDC107-206ENST00000426546 TRMT10CQ7L0Y3 403 aaKnown RBP18.38■□□□□ 0.53
CCDC107-206ENST00000426546 OR10Q1Q8NGQ4 319 aa18.38■□□□□ 0.53
CCDC107-206ENST00000426546 JSRP1Q96MG2 331 aaPredicted RBP18.38■□□□□ 0.53
CCDC107-206ENST00000426546 SPRR3Q9UBC9 169 aa18.38■□□□□ 0.53
CCDC107-206ENST00000426546 ZNF225Q9UK10 706 aa18.38■□□□□ 0.53
CCDC107-206ENST00000426546 RAB21Q9UL25 225 aa18.38■□□□□ 0.53
CCDC107-206ENST00000426546 OR4F21O95013 312 aa18.37■□□□□ 0.53
CCDC107-206ENST00000426546 SNX4O95219 450 aa18.37■□□□□ 0.53
CCDC107-206ENST00000426546 LRATO95237 230 aa18.37■□□□□ 0.53
CCDC107-206ENST00000426546 HSD3B1P14060 373 aa18.37■□□□□ 0.53
CCDC107-206ENST00000426546 TSPAN8P19075 237 aa18.37■□□□□ 0.53
CCDC107-206ENST00000426546 GPX3P22352 226 aa18.37■□□□□ 0.53
CCDC107-206ENST00000426546 HSD3B2P26439 372 aa18.37■□□□□ 0.53
CCDC107-206ENST00000426546 HSD17B3P37058 310 aa18.37■□□□□ 0.53
CCDC107-206ENST00000426546 FBXW4P57775 412 aa18.37■□□□□ 0.53
CCDC107-206ENST00000426546 TRA2BP62995 288 aaKnown RBP18.37■□□□□ 0.53
CCDC107-206ENST00000426546 RPP38P78345 283 aaKnown RBP18.37■□□□□ 0.53
CCDC107-206ENST00000426546 MAP4K2Q12851 820 aa18.37■□□□□ 0.53
CCDC107-206ENST00000426546 RASA2Q15283 850 aa18.37■□□□□ 0.53
CCDC107-206ENST00000426546 PRICKLE4Q2TBC4 344 aa18.37■□□□□ 0.53
CCDC107-206ENST00000426546 KRTAP21-3Q3LHN1 58 aa18.37■□□□□ 0.53
CCDC107-206ENST00000426546 TMEM64Q6YI46 380 aa18.37■□□□□ 0.53
CCDC107-206ENST00000426546 CNPY4Q8N129 248 aa18.37■□□□□ 0.53
CCDC107-206ENST00000426546 SPPL2AQ8TCT8 520 aa18.37■□□□□ 0.53
CCDC107-206ENST00000426546 ANGPTL4Q9BY76 406 aa18.37■□□□□ 0.53
CCDC107-206ENST00000426546 VPS29Q9UBQ0 182 aa18.37■□□□□ 0.53
CCDC107-206ENST00000426546 PSME2Q9UL46 239 aa18.37■□□□□ 0.53
CCDC107-206ENST00000426546 CFL2Q9Y281 166 aa18.37■□□□□ 0.53
CCDC107-206ENST00000426546 RIPK2O43353 540 aa18.36■□□□□ 0.53
CCDC107-206ENST00000426546 CSNK2A2P19784 350 aaPredicted RBP18.36■□□□□ 0.53
CCDC107-206ENST00000426546 GDF1P27539 372 aa18.36■□□□□ 0.53
CCDC107-206ENST00000426546 ABCD3P28288 659 aa18.36■□□□□ 0.53
CCDC107-206ENST00000426546 ZFP36L2P47974 494 aaKnown RBP18.36■□□□□ 0.53
CCDC107-206ENST00000426546 CSTF3Q12996 717 aaKnown RBP18.36■□□□□ 0.53
CCDC107-206ENST00000426546 ZNF678Q5SXM1 525 aa18.36■□□□□ 0.53
CCDC107-206ENST00000426546 DMRTC2Q8IXT2 367 aaPredicted RBP18.36■□□□□ 0.53
CCDC107-206ENST00000426546 LIX1Q8N485 282 aa18.36■□□□□ 0.53
CCDC107-206ENST00000426546 C1orf52Q8N6N3 182 aaKnown RBP18.36■□□□□ 0.53
CCDC107-206ENST00000426546 TM4SF18Q96CE8 201 aa18.36■□□□□ 0.53
CCDC107-206ENST00000426546 RILPQ96NA2 401 aa18.36■□□□□ 0.53
CCDC107-206ENST00000426546 ZNF382Q96SR6 550 aa18.36■□□□□ 0.53
CCDC107-206ENST00000426546 FAIM2Q9BWQ8 316 aa18.36■□□□□ 0.53
CCDC107-206ENST00000426546 SLC6A15Q9H2J7 730 aa18.36■□□□□ 0.53
CCDC107-206ENST00000426546 SLC24A3Q9HC58 644 aa18.36■□□□□ 0.53
CCDC107-206ENST00000426546 MAT2BQ9NZL9 334 aa18.36■□□□□ 0.53
CCDC107-206ENST00000426546 TMEM216Q9P0N5 145 aa18.36■□□□□ 0.53
CCDC107-206ENST00000426546 A0A0G2JNJ9 132 aa18.35■□□□□ 0.53
CCDC107-206ENST00000426546 MANBAO00462 879 aa18.35■□□□□ 0.53
CCDC107-206ENST00000426546 CTIFO43310 598 aaKnown RBP18.35■□□□□ 0.53
CCDC107-206ENST00000426546 CDH16O75309 829 aa18.35■□□□□ 0.53
CCDC107-206ENST00000426546 ERAL1O75616 437 aaKnown RBP18.35■□□□□ 0.53
CCDC107-206ENST00000426546 SUPT7LO94864 414 aa18.35■□□□□ 0.53
CCDC107-206ENST00000426546 KRT6AP02538 564 aa18.35■□□□□ 0.53
CCDC107-206ENST00000426546 KRT6BP04259 564 aa18.35■□□□□ 0.53
CCDC107-206ENST00000426546 NAGAP17050 411 aa18.35■□□□□ 0.53
CCDC107-206ENST00000426546 FEN1P39748 380 aaKnown RBP18.35■□□□□ 0.53
CCDC107-206ENST00000426546 KRT6CP48668 564 aa18.35■□□□□ 0.53
CCDC107-206ENST00000426546 MGAT2Q10469 447 aa18.35■□□□□ 0.53
CCDC107-206ENST00000426546 RIPPLY2Q5TAB7 128 aa18.35■□□□□ 0.53
CCDC107-206ENST00000426546 PACS2Q86VP3 889 aa18.35■□□□□ 0.53
CCDC107-206ENST00000426546 SLC22A9Q8IVM8 553 aa18.35■□□□□ 0.53
CCDC107-206ENST00000426546 ULK2Q8IYT8 1036 aa18.35■□□□□ 0.53
CCDC107-206ENST00000426546 MMP21Q8N119 569 aa18.35■□□□□ 0.53
CCDC107-206ENST00000426546 CDYL2Q8N8U2 506 aa18.35■□□□□ 0.53
CCDC107-206ENST00000426546 AENQ8WTP8 325 aaKnown RBP18.35■□□□□ 0.53
CCDC107-206ENST00000426546 KLHL29Q96CT2 875 aa18.35■□□□□ 0.53
CCDC107-206ENST00000426546 TMEM237Q96Q45 408 aa18.35■□□□□ 0.53
CCDC107-206ENST00000426546 HBEGFQ99075 208 aa18.35■□□□□ 0.53
CCDC107-206ENST00000426546 TXLNGYQ9BZA5 131 aa18.35■□□□□ 0.53
CCDC107-206ENST00000426546 NXF5Q9H1B4 397 aaKnown RBP18.35■□□□□ 0.53
CCDC107-206ENST00000426546 Q9UFV3 132 aa18.35■□□□□ 0.53
CCDC107-206ENST00000426546 FETUBQ9UGM5 382 aa18.35■□□□□ 0.53
CCDC107-206ENST00000426546 ZNF639Q9UID6 485 aa18.35■□□□□ 0.53
CCDC107-206ENST00000426546 DTX4Q9Y2E6 619 aa18.35■□□□□ 0.53
CCDC107-206ENST00000426546 STK38LQ9Y2H1 464 aa18.35■□□□□ 0.53
CCDC107-206ENST00000426546 DLX3O60479 287 aa18.34■□□□□ 0.53
CCDC107-206ENST00000426546 KRT15P19012 456 aa18.34■□□□□ 0.53
CCDC107-206ENST00000426546 ATP5F1P24539 256 aaPredicted RBP18.34■□□□□ 0.53
CCDC107-206ENST00000426546 CASP3P42574 277 aa18.34■□□□□ 0.53
CCDC107-206ENST00000426546 TRPC1P48995 793 aa18.34■□□□□ 0.53
CCDC107-206ENST00000426546 SLC25A35Q3KQZ1 300 aa18.34■□□□□ 0.53
CCDC107-206ENST00000426546 UNC50Q53HI1 259 aa18.34■□□□□ 0.53
CCDC107-206ENST00000426546 FNDC7Q5VTL7 733 aa18.34■□□□□ 0.53
CCDC107-206ENST00000426546 BICRALQ6AI39 1079 aa18.34■□□□□ 0.53
CCDC107-206ENST00000426546 TMEM81Q6P7N7 255 aa18.34■□□□□ 0.53
CCDC107-206ENST00000426546 EMBQ6PCB8 327 aa18.34■□□□□ 0.53
CCDC107-206ENST00000426546 GPRIN3Q6ZVF9 776 aa18.34■□□□□ 0.53
CCDC107-206ENST00000426546 CLYBLQ8N0X4 340 aa18.34■□□□□ 0.53
CCDC107-206ENST00000426546 ACMSDQ8TDX5 336 aa18.34■□□□□ 0.53
CCDC107-206ENST00000426546 CTHRC1Q96CG8 243 aa18.34■□□□□ 0.53
CCDC107-206ENST00000426546 NTNG2Q96CW9 530 aa18.34■□□□□ 0.53
CCDC107-206ENST00000426546 BRINP2Q9C0B6 783 aa18.34■□□□□ 0.53
CCDC107-206ENST00000426546 UBQLN3Q9H347 655 aa18.34■□□□□ 0.53
CCDC107-206ENST00000426546 ALKBH4Q9NXW9 302 aa18.34■□□□□ 0.53
CCDC107-206ENST00000426546 KCNN3Q9UGI6 736 aa18.34■□□□□ 0.53
CCDC107-206ENST00000426546 MCM8Q9UJA3 840 aa18.34■□□□□ 0.53
CCDC107-206ENST00000426546 C15orf41Q9Y2V0 281 aa18.34■□□□□ 0.53
CCDC107-206ENST00000426546 ACOX3O15254 700 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms